RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 KDM5CP41229 1560 aa19.57■□□□□ 0.72
RNF43-202ENST00000577625 DEPDC5O75140 1603 aa19.57■□□□□ 0.72
RNF43-202ENST00000577625 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
RNF43-202ENST00000577625 NEO1Q92859 1461 aa19.55■□□□□ 0.72
RNF43-202ENST00000577625 POGZQ7Z3K3 1410 aa19.55■□□□□ 0.72
RNF43-202ENST00000577625 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
RNF43-202ENST00000577625 DIP2BQ9P265 1576 aa19.54■□□□□ 0.72
RNF43-202ENST00000577625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.712e-8■■□□□ 11.9
RNF43-202ENST00000577625 MIER1Q8N108 512 aa19.51■□□□□ 0.71
RNF43-202ENST00000577625 HECW2Q9P2P5 1572 aa19.51■□□□□ 0.71
RNF43-202ENST00000577625 TSHZ2Q9NRE2 1034 aa19.5■□□□□ 0.71
RNF43-202ENST00000577625 RICTORQ6R327 1708 aa19.48■□□□□ 0.71
RNF43-202ENST00000577625 MLH3Q9UHC1 1453 aa19.48■□□□□ 0.71
RNF43-202ENST00000577625 PRKCSHP14314 528 aaPredicted RBP19.48■□□□□ 0.71
RNF43-202ENST00000577625 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
RNF43-202ENST00000577625 MROH1Q8NDA8 1641 aa19.47■□□□□ 0.71
RNF43-202ENST00000577625 VWDEQ8N2E2 1590 aa19.47■□□□□ 0.71
RNF43-202ENST00000577625 E9PCH4 1651 aa19.47■□□□□ 0.71
RNF43-202ENST00000577625 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
RNF43-202ENST00000577625 PLA2R1Q13018 1463 aa19.46■□□□□ 0.71
RNF43-202ENST00000577625 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
RNF43-202ENST00000577625 ABCA6Q8N139 1617 aa19.46■□□□□ 0.71
RNF43-202ENST00000577625 TET3O43151 1660 aa19.45■□□□□ 0.7
RNF43-202ENST00000577625 PPRC1Q5VV67 1664 aaKnown RBP19.45■□□□□ 0.7
RNF43-202ENST00000577625 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
RNF43-202ENST00000577625 TSPOAP1O95153 1857 aa19.44■□□□□ 0.7
RNF43-202ENST00000577625 FRMPD1Q5SYB0 1578 aa19.44■□□□□ 0.7
RNF43-202ENST00000577625 ATP10AO60312 1499 aa19.43■□□□□ 0.7
RNF43-202ENST00000577625 NBPF8Q3BBV2 869 aa19.43■□□□□ 0.7
RNF43-202ENST00000577625 RNF17Q9BXT8 1623 aaKnown RBP19.43■□□□□ 0.7
RNF43-202ENST00000577625 A2MP01023 1474 aa19.43■□□□□ 0.7
RNF43-202ENST00000577625 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
RNF43-202ENST00000577625 BCORL1Q5H9F3 1711 aa19.41■□□□□ 0.7
RNF43-202ENST00000577625 KIF13AQ9H1H9 1805 aa19.41■□□□□ 0.7
RNF43-202ENST00000577625 FAM69CQ0P6D2 419 aa19.4■□□□□ 0.7
RNF43-202ENST00000577625 HIRIP3Q9BW71 556 aaPredicted RBP19.4■□□□□ 0.7
RNF43-202ENST00000577625 SPHKAPQ2M3C7 1700 aa19.4■□□□□ 0.7
RNF43-202ENST00000577625 KIF3BO15066 747 aa19.39■□□□□ 0.69
RNF43-202ENST00000577625 DIP2CQ9Y2E4 1556 aa19.39■□□□□ 0.69
RNF43-202ENST00000577625 RAPGEF3O95398 923 aa19.38■□□□□ 0.69
RNF43-202ENST00000577625 UHRF1BP1Q6BDS2 1440 aa19.38■□□□□ 0.69
RNF43-202ENST00000577625 KANK1Q14678 1352 aa19.37■□□□□ 0.69
RNF43-202ENST00000577625 CEP152O94986 1710 aa19.37■□□□□ 0.69
RNF43-202ENST00000577625 TRPM2O94759 1503 aa19.35■□□□□ 0.69
RNF43-202ENST00000577625 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
RNF43-202ENST00000577625 EFCAB6Q5THR3 1501 aa19.33■□□□□ 0.69
RNF43-202ENST00000577625 HSPA5P11021 654 aaKnown RBP19.33■□□□□ 0.69
RNF43-202ENST00000577625 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
RNF43-202ENST00000577625 PTPRTO14522 1441 aa19.33■□□□□ 0.68
RNF43-202ENST00000577625 EIF4G2P78344 907 aaKnown RBP eCLIP19.32■□□□□ 0.68
RNF43-202ENST00000577625 CLTCL1P53675 1640 aa19.31■□□□□ 0.68
RNF43-202ENST00000577625 RALGAPBQ86X10 1494 aa19.31■□□□□ 0.68
RNF43-202ENST00000577625 SPATA31E1Q6ZUB1 1445 aa19.3■□□□□ 0.68
RNF43-202ENST00000577625 YEATS2Q9ULM3 1422 aa19.3■□□□□ 0.68
RNF43-202ENST00000577625 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
RNF43-202ENST00000577625 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
RNF43-202ENST00000577625 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
RNF43-202ENST00000577625 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
RNF43-202ENST00000577625 TRPM1Q7Z4N2 1603 aa19.27■□□□□ 0.68
RNF43-202ENST00000577625 ERICH6Q7L0X2 663 aa19.26■□□□□ 0.67
RNF43-202ENST00000577625 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
RNF43-202ENST00000577625 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
RNF43-202ENST00000577625 ABCC3O15438 1527 aa19.25■□□□□ 0.67
RNF43-202ENST00000577625 CFAP65Q6ZU64 1925 aaKnown RBP19.23■□□□□ 0.67
RNF43-202ENST00000577625 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
RNF43-202ENST00000577625 CAMSAP1Q5T5Y3 1602 aa19.23■□□□□ 0.67
RNF43-202ENST00000577625 KIF1BO60333 1816 aa19.22■□□□□ 0.67
RNF43-202ENST00000577625 NEURL4Q96JN8 1562 aa19.21■□□□□ 0.67
RNF43-202ENST00000577625 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
RNF43-202ENST00000577625 WASHC2AQ641Q2 1341 aa19.21■□□□□ 0.67
RNF43-202ENST00000577625 USP47Q96K76 1375 aa19.21■□□□□ 0.67
RNF43-202ENST00000577625 UGGT1Q9NYU2 1555 aa19.21■□□□□ 0.67
RNF43-202ENST00000577625 GGT6Q6P531 493 aa19.2■□□□□ 0.66
RNF43-202ENST00000577625 NPATQ14207 1427 aa19.19■□□□□ 0.66
RNF43-202ENST00000577625 REREQ9P2R6 1566 aa19.19■□□□□ 0.66
RNF43-202ENST00000577625 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
RNF43-202ENST00000577625 LAMC1P11047 1609 aa19.18■□□□□ 0.66
RNF43-202ENST00000577625 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
RNF43-202ENST00000577625 MROH2AA6NES4 1674 aa19.17■□□□□ 0.66
RNF43-202ENST00000577625 COL17A1Q9UMD9 1497 aaPredicted RBP19.17■□□□□ 0.66
RNF43-202ENST00000577625 CCDC7Q96M83 1385 aa19.16■□□□□ 0.66
RNF43-202ENST00000577625 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
RNF43-202ENST00000577625 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
RNF43-202ENST00000577625 IFT172Q9UG01 1749 aa19.15■□□□□ 0.66
RNF43-202ENST00000577625 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
RNF43-202ENST00000577625 WASHC2CQ9Y4E1 1318 aa19.15■□□□□ 0.66
RNF43-202ENST00000577625 GPRASP1Q5JY77 1395 aa19.14■□□□□ 0.65
RNF43-202ENST00000577625 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
RNF43-202ENST00000577625 AGLP35573 1532 aa19.13■□□□□ 0.65
RNF43-202ENST00000577625 CNTLNQ9NXG0 1405 aa19.12■□□□□ 0.65
RNF43-202ENST00000577625 ADGRB3O60242 1522 aa19.11■□□□□ 0.65
RNF43-202ENST00000577625 ARHGAP31Q2M1Z3 1444 aa19.11■□□□□ 0.65
RNF43-202ENST00000577625 NOS1P29475 1434 aa19.1■□□□□ 0.65
RNF43-202ENST00000577625 PIK3C2BO00750 1634 aa19.1■□□□□ 0.65
RNF43-202ENST00000577625 SYNMO15061 1565 aa19.1■□□□□ 0.65
RNF43-202ENST00000577625 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
RNF43-202ENST00000577625 ANP32CO43423 234 aa19.09■□□□□ 0.65
RNF43-202ENST00000577625 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
RNF43-202ENST00000577625 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.64
RNF43-202ENST00000577625 STAC3Q96MF2 364 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms