RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 APAF1O14727 1248 aa16.45■□□□□ 0.22
PCDHGB3-201ENST00000576222 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
PCDHGB3-201ENST00000576222 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
PCDHGB3-201ENST00000576222 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
PCDHGB3-201ENST00000576222 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
PCDHGB3-201ENST00000576222 SYAP1Q96A49 352 aaPredicted RBP16.43■□□□□ 0.22
PCDHGB3-201ENST00000576222 POGKQ9P215 609 aa16.42■□□□□ 0.22
PCDHGB3-201ENST00000576222 APBB1O00213 710 aa16.42■□□□□ 0.22
PCDHGB3-201ENST00000576222 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
PCDHGB3-201ENST00000576222 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
PCDHGB3-201ENST00000576222 GOLGA6L4A6NEF3 574 aa16.41■□□□□ 0.22
PCDHGB3-201ENST00000576222 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
PCDHGB3-201ENST00000576222 NBPF8Q3BBV2 869 aa16.41■□□□□ 0.22
PCDHGB3-201ENST00000576222 MRE11P49959 708 aa16.39■□□□□ 0.21
PCDHGB3-201ENST00000576222 DRC7Q8IY82 874 aa16.39■□□□□ 0.21
PCDHGB3-201ENST00000576222 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCDHGB3-201ENST00000576222 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
PCDHGB3-201ENST00000576222 CCDC144AA2RUR9 1427 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 GOLGA6L6A8MZA4 724 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 CUX1P39880 1505 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 KANK1Q14678 1352 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
PCDHGB3-201ENST00000576222 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
PCDHGB3-201ENST00000576222 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
PCDHGB3-201ENST00000576222 NRDCO43847 1150 aa16.36■□□□□ 0.21
PCDHGB3-201ENST00000576222 KCNJ4P48050 445 aa16.36■□□□□ 0.21
PCDHGB3-201ENST00000576222 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
PCDHGB3-201ENST00000576222 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHGB3-201ENST00000576222 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
PCDHGB3-201ENST00000576222 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
PCDHGB3-201ENST00000576222 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
PCDHGB3-201ENST00000576222 TRAK2O60296 914 aa16.34■□□□□ 0.21
PCDHGB3-201ENST00000576222 ST18O60284 1047 aa16.33■□□□□ 0.21
PCDHGB3-201ENST00000576222 PKNOX2Q96KN3 472 aa16.33■□□□□ 0.2
PCDHGB3-201ENST00000576222 MIA2Q96PC5 1412 aa16.33■□□□□ 0.2
PCDHGB3-201ENST00000576222 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
PCDHGB3-201ENST00000576222 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
PCDHGB3-201ENST00000576222 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
PCDHGB3-201ENST00000576222 OS9Q13438 667 aaPredicted RBP16.31■□□□□ 0.2
PCDHGB3-201ENST00000576222 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
PCDHGB3-201ENST00000576222 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
PCDHGB3-201ENST00000576222 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
PCDHGB3-201ENST00000576222 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
PCDHGB3-201ENST00000576222 C11orf95C9JLR9 678 aaPredicted RBP16.31■□□□□ 0.2
PCDHGB3-201ENST00000576222 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
PCDHGB3-201ENST00000576222 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
PCDHGB3-201ENST00000576222 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
PCDHGB3-201ENST00000576222 FGD1P98174 961 aa16.29■□□□□ 0.2
PCDHGB3-201ENST00000576222 AAMPQ13685 434 aa16.29■□□□□ 0.2
PCDHGB3-201ENST00000576222 FYCO1Q9BQS8 1478 aa16.29■□□□□ 0.2
PCDHGB3-201ENST00000576222 PHF14O94880 888 aa16.29■□□□□ 0.2
PCDHGB3-201ENST00000576222 DZIP1LQ8IYY4 767 aaKnown RBP16.29■□□□□ 0.2
PCDHGB3-201ENST00000576222 DDX19BQ9UMR2 479 aa16.28■□□□□ 0.2
PCDHGB3-201ENST00000576222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCDHGB3-201ENST00000576222 FGD5Q6ZNL6 1462 aa16.28■□□□□ 0.2
PCDHGB3-201ENST00000576222 KIAA1211Q6ZU35 1233 aa16.27■□□□□ 0.2
PCDHGB3-201ENST00000576222 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
PCDHGB3-201ENST00000576222 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
PCDHGB3-201ENST00000576222 CSPP1Q1MSJ5 1256 aa16.25■□□□□ 0.19
PCDHGB3-201ENST00000576222 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
PCDHGB3-201ENST00000576222 NASPP49321 788 aaPredicted RBP16.25■□□□□ 0.19
PCDHGB3-201ENST00000576222 TPM2P07951 284 aa16.24■□□□□ 0.19
PCDHGB3-201ENST00000576222 CFTRP13569 1480 aa16.24■□□□□ 0.19
PCDHGB3-201ENST00000576222 STK26Q9P289 416 aa16.24■□□□□ 0.19
PCDHGB3-201ENST00000576222 NAIPQ13075 1403 aa16.23■□□□□ 0.19
PCDHGB3-201ENST00000576222 HMMRO75330 724 aa16.23■□□□□ 0.19
PCDHGB3-201ENST00000576222 SKAP1Q86WV1 359 aa16.23■□□□□ 0.19
PCDHGB3-201ENST00000576222 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
PCDHGB3-201ENST00000576222 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
PCDHGB3-201ENST00000576222 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
PCDHGB3-201ENST00000576222 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
PCDHGB3-201ENST00000576222 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
PCDHGB3-201ENST00000576222 MAP7D2Q96T17 732 aa16.22■□□□□ 0.19
PCDHGB3-201ENST00000576222 TRIM6-TRIM34B2RNG4 842 aa16.21■□□□□ 0.19
PCDHGB3-201ENST00000576222 LNPKQ9C0E8 428 aa16.21■□□□□ 0.19
PCDHGB3-201ENST00000576222 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
PCDHGB3-201ENST00000576222 BCAR3O75815 825 aa16.21■□□□□ 0.19
PCDHGB3-201ENST00000576222 NUCB2P80303 420 aa16.21■□□□□ 0.19
PCDHGB3-201ENST00000576222 RUNDC1Q96C34 613 aa16.21■□□□□ 0.19
PCDHGB3-201ENST00000576222 PPP2R1AP30153 589 aa16.21■□□□□ 0.18
PCDHGB3-201ENST00000576222 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.18
PCDHGB3-201ENST00000576222 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
PCDHGB3-201ENST00000576222 RRP9O43818 475 aaKnown RBP16.2■□□□□ 0.18
PCDHGB3-201ENST00000576222 MCM4P33991 863 aa16.2■□□□□ 0.18
PCDHGB3-201ENST00000576222 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
PCDHGB3-201ENST00000576222 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
PCDHGB3-201ENST00000576222 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 ESPNB1AK53 854 aa16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 FOXD4L6Q3SYB3 417 aaPredicted RBP16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 FOXD4L3Q6VB84 417 aaPredicted RBP16.19■□□□□ 0.18
PCDHGB3-201ENST00000576222 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
PCDHGB3-201ENST00000576222 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
PCDHGB3-201ENST00000576222 TERF2IPQ9NYB0 399 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms