RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 NAIPQ13075 1403 aa23.79■■□□□ 1.4
LITAF-218ENST00000576036 ANKRD50Q9ULJ7 1429 aa23.79■■□□□ 1.4
LITAF-218ENST00000576036 PRDM15P57071 1507 aaPredicted RBP23.79■■□□□ 1.4
LITAF-218ENST00000576036 KIF3BO15066 747 aa23.78■■□□□ 1.4
LITAF-218ENST00000576036 CEP152O94986 1710 aa23.77■■□□□ 1.4
LITAF-218ENST00000576036 UNC13BO14795 1591 aa23.77■■□□□ 1.4
LITAF-218ENST00000576036 HFM1A2PYH4 1435 aa23.76■■□□□ 1.39
LITAF-218ENST00000576036 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
LITAF-218ENST00000576036 VWDEQ8N2E2 1590 aa23.75■■□□□ 1.39
LITAF-218ENST00000576036 C3P01024 1663 aa23.73■■□□□ 1.39
LITAF-218ENST00000576036 KDM5DQ9BY66 1539 aa23.73■■□□□ 1.39
LITAF-218ENST00000576036 ZC3H13Q5T200 1668 aaKnown RBP23.73■■□□□ 1.39
LITAF-218ENST00000576036 GGT6Q6P531 493 aa23.72■■□□□ 1.39
LITAF-218ENST00000576036 FAM135AQ9P2D6 1515 aa23.72■■□□□ 1.39
LITAF-218ENST00000576036 ABCC3O15438 1527 aa23.71■■□□□ 1.39
LITAF-218ENST00000576036 PTPRMP28827 1452 aa23.71■■□□□ 1.39
LITAF-218ENST00000576036 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
LITAF-218ENST00000576036 CAMSAP1Q5T5Y3 1602 aa23.67■■□□□ 1.38
LITAF-218ENST00000576036 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
LITAF-218ENST00000576036 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
LITAF-218ENST00000576036 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
LITAF-218ENST00000576036 LMTK2Q8IWU2 1503 aa23.64■■□□□ 1.37
LITAF-218ENST00000576036 CFAP65Q6ZU64 1925 aaKnown RBP23.61■■□□□ 1.37
LITAF-218ENST00000576036 TET3O43151 1660 aa23.6■■□□□ 1.37
LITAF-218ENST00000576036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
LITAF-218ENST00000576036 ZMYM3Q14202 1370 aa23.59■■□□□ 1.37
LITAF-218ENST00000576036 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
LITAF-218ENST00000576036 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
LITAF-218ENST00000576036 CEBPAP49715 358 aaPredicted RBP23.58■■□□□ 1.37
LITAF-218ENST00000576036 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.36
LITAF-218ENST00000576036 E9PCH4 1651 aa23.56■■□□□ 1.36
LITAF-218ENST00000576036 PZPP20742 1482 aa23.56■■□□□ 1.36
LITAF-218ENST00000576036 PREX1Q8TCU6 1659 aa23.54■■□□□ 1.36
LITAF-218ENST00000576036 KANK1Q14678 1352 aa23.54■■□□□ 1.36
LITAF-218ENST00000576036 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
LITAF-218ENST00000576036 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
LITAF-218ENST00000576036 ARHGAP31Q2M1Z3 1444 aa23.53■■□□□ 1.36
LITAF-218ENST00000576036 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
LITAF-218ENST00000576036 NUP155O75694 1391 aa23.52■■□□□ 1.36
LITAF-218ENST00000576036 NPATQ14207 1427 aa23.52■■□□□ 1.36
LITAF-218ENST00000576036 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
LITAF-218ENST00000576036 SPATA31D1Q6ZQQ2 1576 aa23.51■■□□□ 1.35
LITAF-218ENST00000576036 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
LITAF-218ENST00000576036 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
LITAF-218ENST00000576036 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
LITAF-218ENST00000576036 FBXO31Q5XUX0 539 aaPredicted RBP23.47■■□□□ 1.35
LITAF-218ENST00000576036 SYNMO15061 1565 aa23.46■■□□□ 1.35
LITAF-218ENST00000576036 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
LITAF-218ENST00000576036 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
LITAF-218ENST00000576036 NOS1P29475 1434 aa23.42■■□□□ 1.34
LITAF-218ENST00000576036 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
LITAF-218ENST00000576036 LMTK3Q96Q04 1460 aa23.41■■□□□ 1.34
LITAF-218ENST00000576036 TRIM52Q96A61 297 aa23.4■■□□□ 1.34
LITAF-218ENST00000576036 TNRQ92752 1358 aa23.4■■□□□ 1.34
LITAF-218ENST00000576036 HRCP23327 699 aa23.39■■□□□ 1.33
LITAF-218ENST00000576036 PIK3C2BO00750 1634 aa23.38■■□□□ 1.33
LITAF-218ENST00000576036 CEP170BQ9Y4F5 1589 aaPredicted RBP23.36■■□□□ 1.33
LITAF-218ENST00000576036 UGGT1Q9NYU2 1555 aa23.35■■□□□ 1.33
LITAF-218ENST00000576036 PLA2R1Q13018 1463 aa23.34■■□□□ 1.33
LITAF-218ENST00000576036 PTPRTO14522 1441 aa23.33■■□□□ 1.33
LITAF-218ENST00000576036 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.32
LITAF-218ENST00000576036 UBR1Q8IWV7 1749 aa23.33■■□□□ 1.32
LITAF-218ENST00000576036 UHRF1BP1Q6BDS2 1440 aa23.33■■□□□ 1.32
LITAF-218ENST00000576036 NLRP1Q9C000 1473 aa23.32■■□□□ 1.32
LITAF-218ENST00000576036 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
LITAF-218ENST00000576036 SLC4A1APQ9BWU0 796 aaKnown RBP23.32■■□□□ 1.32
LITAF-218ENST00000576036 A2ML1A8K2U0 1454 aa23.31■■□□□ 1.32
LITAF-218ENST00000576036 PKD2Q13563 968 aa23.31■■□□□ 1.32
LITAF-218ENST00000576036 TRPM2O94759 1503 aa23.31■■□□□ 1.32
LITAF-218ENST00000576036 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
LITAF-218ENST00000576036 ACIN1Q9UKV3 1341 aaKnown RBP23.3■■□□□ 1.32
LITAF-218ENST00000576036 KDM5AP29375 1690 aaKnown RBP23.28■■□□□ 1.32
LITAF-218ENST00000576036 FOXD1Q16676 465 aa23.27■■□□□ 1.32
LITAF-218ENST00000576036 PCGF6Q9BYE7 350 aa23.26■■□□□ 1.31
LITAF-218ENST00000576036 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
LITAF-218ENST00000576036 ADGRB3O60242 1522 aa23.24■■□□□ 1.31
LITAF-218ENST00000576036 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
LITAF-218ENST00000576036 IDI1Q13907 227 aa23.23■■□□□ 1.31
LITAF-218ENST00000576036 HSPA2P54652 639 aa23.21■■□□□ 1.31
LITAF-218ENST00000576036 KIF1BO60333 1816 aa23.21■■□□□ 1.31
LITAF-218ENST00000576036 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
LITAF-218ENST00000576036 POLR1AO95602 1720 aaPredicted RBP23.18■■□□□ 1.3
LITAF-218ENST00000576036 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
LITAF-218ENST00000576036 ANKRD30BQ9BXX2 1392 aa23.16■■□□□ 1.3
LITAF-218ENST00000576036 ARHGAP23Q9P227 1491 aa23.16■■□□□ 1.3
LITAF-218ENST00000576036 SLIT1O75093 1534 aa23.15■■□□□ 1.3
LITAF-218ENST00000576036 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
LITAF-218ENST00000576036 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.29
LITAF-218ENST00000576036 ZFYVE9O95405 1425 aa23.08■■□□□ 1.29
LITAF-218ENST00000576036 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
LITAF-218ENST00000576036 TMEM2Q9UHN6 1383 aa23.08■■□□□ 1.29
LITAF-218ENST00000576036 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.28
LITAF-218ENST00000576036 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
LITAF-218ENST00000576036 PPLO60437 1756 aa23.06■■□□□ 1.28
LITAF-218ENST00000576036 NEXMIFQ5QGS0 1516 aa23.06■■□□□ 1.28
LITAF-218ENST00000576036 NCKAP5LQ9HCH0 1330 aa23.04■■□□□ 1.28
LITAF-218ENST00000576036 RIMS2Q9UQ26 1411 aa23.02■■□□□ 1.28
LITAF-218ENST00000576036 CHGAP10645 457 aaKnown RBP23.02■■□□□ 1.28
LITAF-218ENST00000576036 LTKP29376 864 aa23.02■■□□□ 1.28
LITAF-218ENST00000576036 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms