RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
TOM1L1-221ENST00000575882 PTPRGP23470 1445 aa23.19■■□□□ 1.3
TOM1L1-221ENST00000575882 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
TOM1L1-221ENST00000575882 RALBP1Q15311 655 aa23.17■■□□□ 1.3
TOM1L1-221ENST00000575882 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
TOM1L1-221ENST00000575882 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
TOM1L1-221ENST00000575882 E9PCH4 1651 aa23.15■■□□□ 1.3
TOM1L1-221ENST00000575882 NOP58Q9Y2X3 529 aaKnown RBP23.14■■□□□ 1.3
TOM1L1-221ENST00000575882 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
TOM1L1-221ENST00000575882 FAM135AQ9P2D6 1515 aa23.1■■□□□ 1.29
TOM1L1-221ENST00000575882 MYT1LQ9UL68 1186 aa23.1■■□□□ 1.29
TOM1L1-221ENST00000575882 CCDC141Q6ZP82 1450 aa23.07■■□□□ 1.28
TOM1L1-221ENST00000575882 PAK3O75914 559 aaPredicted RBP23.07■■□□□ 1.28
TOM1L1-221ENST00000575882 PRAG1Q86YV5 1406 aa23.06■■□□□ 1.28
TOM1L1-221ENST00000575882 RRP1P56182 461 aaKnown RBP23.06■■□□□ 1.28
TOM1L1-221ENST00000575882 TRPM1Q7Z4N2 1603 aa23.06■■□□□ 1.28
TOM1L1-221ENST00000575882 SAMD9LQ8IVG5 1584 aa23.05■■□□□ 1.28
TOM1L1-221ENST00000575882 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
TOM1L1-221ENST00000575882 CCDC144AA2RUR9 1427 aa23.05■■□□□ 1.28
TOM1L1-221ENST00000575882 PARD3Q8TEW0 1356 aa23.05■■□□□ 1.28
TOM1L1-221ENST00000575882 ANP32AP39687 249 aaKnown RBP23.05■■□□□ 1.28
TOM1L1-221ENST00000575882 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
TOM1L1-221ENST00000575882 RCAN3Q9UKA8 241 aa23.02■■□□□ 1.27
TOM1L1-221ENST00000575882 RGL3Q3MIN7 710 aa23.01■■□□□ 1.27
TOM1L1-221ENST00000575882 PREX2Q70Z35 1606 aa23.01■■□□□ 1.27
TOM1L1-221ENST00000575882 NBPF1Q3BBV0 1214 aa23.01■■□□□ 1.27
TOM1L1-221ENST00000575882 IPO9Q96P70 1041 aaKnown RBP23.01■■□□□ 1.27
TOM1L1-221ENST00000575882 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
TOM1L1-221ENST00000575882 EXOC6Q8TAG9 804 aa23■■□□□ 1.27
TOM1L1-221ENST00000575882 RSPH4AQ5TD94 716 aa22.99■■□□□ 1.27
TOM1L1-221ENST00000575882 PER1O15534 1290 aaPredicted RBP22.98■■□□□ 1.27
TOM1L1-221ENST00000575882 PDE3BQ13370 1112 aa22.98■■□□□ 1.27
TOM1L1-221ENST00000575882 GPRASP1Q5JY77 1395 aa22.97■■□□□ 1.27
TOM1L1-221ENST00000575882 NBR1Q14596 966 aa22.97■■□□□ 1.27
TOM1L1-221ENST00000575882 DEKP35659 375 aaKnown RBP22.97■■□□□ 1.27
TOM1L1-221ENST00000575882 A2MP01023 1474 aa22.96■■□□□ 1.27
TOM1L1-221ENST00000575882 PLA2R1Q13018 1463 aa22.96■■□□□ 1.27
TOM1L1-221ENST00000575882 COL17A1Q9UMD9 1497 aaPredicted RBP22.95■■□□□ 1.27
TOM1L1-221ENST00000575882 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
TOM1L1-221ENST00000575882 UNC13BO14795 1591 aa22.95■■□□□ 1.26
TOM1L1-221ENST00000575882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.264e-8■■□□□ 13.9
TOM1L1-221ENST00000575882 DISP3Q9P2K9 1392 aa22.93■■□□□ 1.26
TOM1L1-221ENST00000575882 PRDM15P57071 1507 aaPredicted RBP22.93■■□□□ 1.26
TOM1L1-221ENST00000575882 LAMC1P11047 1609 aa22.92■■□□□ 1.26
TOM1L1-221ENST00000575882 CC2D1BQ5T0F9 858 aaKnown RBP22.92■■□□□ 1.26
TOM1L1-221ENST00000575882 ZBTB47Q9UFB7 747 aaPredicted RBP22.92■■□□□ 1.26
TOM1L1-221ENST00000575882 CDCA7LQ96GN5 454 aa22.91■■□□□ 1.26
TOM1L1-221ENST00000575882 TESK2Q96S53 571 aa22.91■■□□□ 1.26
TOM1L1-221ENST00000575882 MAST1Q9Y2H9 1570 aa22.91■■□□□ 1.26
TOM1L1-221ENST00000575882 WASHC2CQ9Y4E1 1318 aa22.91■■□□□ 1.26
TOM1L1-221ENST00000575882 ARHGAP5Q13017 1502 aa22.89■■□□□ 1.26
TOM1L1-221ENST00000575882 TCERG1O14776 1098 aaKnown RBP22.89■■□□□ 1.25
TOM1L1-221ENST00000575882 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
TOM1L1-221ENST00000575882 PANK3Q9H999 370 aa22.88■■□□□ 1.25
TOM1L1-221ENST00000575882 TTC37Q6PGP7 1564 aa22.87■■□□□ 1.25
TOM1L1-221ENST00000575882 BLMP54132 1417 aaPredicted RBP22.87■■□□□ 1.25
TOM1L1-221ENST00000575882 IQGAP3Q86VI3 1631 aa22.87■■□□□ 1.25
TOM1L1-221ENST00000575882 MYO5CQ9NQX4 1742 aa22.87■■□□□ 1.25
TOM1L1-221ENST00000575882 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
TOM1L1-221ENST00000575882 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
TOM1L1-221ENST00000575882 INSRP06213 1382 aa22.85■■□□□ 1.25
TOM1L1-221ENST00000575882 ZMYM4Q5VZL5 1548 aa22.84■■□□□ 1.25
TOM1L1-221ENST00000575882 TMF1P82094 1093 aa22.84■■□□□ 1.25
TOM1L1-221ENST00000575882 PLXNC1O60486 1568 aa22.84■■□□□ 1.25
TOM1L1-221ENST00000575882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.84■■□□□ 1.25
TOM1L1-221ENST00000575882 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
TOM1L1-221ENST00000575882 PDE4AP27815 886 aa22.81■■□□□ 1.24
TOM1L1-221ENST00000575882 PLIN1O60240 522 aa22.81■■□□□ 1.24
TOM1L1-221ENST00000575882 ATP10AO60312 1499 aa22.8■■□□□ 1.24
TOM1L1-221ENST00000575882 DUOX2Q9NRD8 1548 aa22.79■■□□□ 1.24
TOM1L1-221ENST00000575882 MS4A1P11836 297 aa22.79■■□□□ 1.24
TOM1L1-221ENST00000575882 RTL5Q5HYW3 569 aaPredicted RBP22.78■■□□□ 1.24
TOM1L1-221ENST00000575882 BACH2Q9BYV9 841 aa22.78■■□□□ 1.24
TOM1L1-221ENST00000575882 MAGI2Q86UL8 1455 aa22.77■■□□□ 1.24
TOM1L1-221ENST00000575882 RNF17Q9BXT8 1623 aaKnown RBP22.76■■□□□ 1.23
TOM1L1-221ENST00000575882 CRBNQ96SW2 442 aa22.76■■□□□ 1.23
TOM1L1-221ENST00000575882 ADAMTS8Q9UP79 889 aa22.72■■□□□ 1.23
TOM1L1-221ENST00000575882 WDR7Q9Y4E6 1490 aa22.71■■□□□ 1.23
TOM1L1-221ENST00000575882 KNSTRNQ9Y448 316 aa22.69■■□□□ 1.22
TOM1L1-221ENST00000575882 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
TOM1L1-221ENST00000575882 CHD1O14646 1710 aa22.67■■□□□ 1.22
TOM1L1-221ENST00000575882 PPP2R1AP30153 589 aa22.67■■□□□ 1.22
TOM1L1-221ENST00000575882 SKAP1Q86WV1 359 aa22.67■■□□□ 1.22
TOM1L1-221ENST00000575882 C20orf194Q5TEA3 1177 aa22.67■■□□□ 1.22
TOM1L1-221ENST00000575882 MADDQ8WXG6 1647 aa22.67■■□□□ 1.22
TOM1L1-221ENST00000575882 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
TOM1L1-221ENST00000575882 WDR43Q15061 677 aaKnown RBP eCLIP22.66■■□□□ 1.22
TOM1L1-221ENST00000575882 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
TOM1L1-221ENST00000575882 PLEKHH1Q9ULM0 1364 aa22.65■■□□□ 1.22
TOM1L1-221ENST00000575882 PLCH2O75038 1416 aa22.64■■□□□ 1.21
TOM1L1-221ENST00000575882 AMER1Q5JTC6 1135 aaPredicted RBP22.64■■□□□ 1.21
TOM1L1-221ENST00000575882 LAS1LQ9Y4W2 734 aaKnown RBP22.63■■□□□ 1.21
TOM1L1-221ENST00000575882 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
TOM1L1-221ENST00000575882 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
TOM1L1-221ENST00000575882 DUSP27Q5VZP5 1158 aa22.62■■□□□ 1.21
TOM1L1-221ENST00000575882 SYNMO15061 1565 aa22.61■■□□□ 1.21
TOM1L1-221ENST00000575882 TRAPPC8Q9Y2L5 1435 aa22.61■■□□□ 1.21
TOM1L1-221ENST00000575882 ABCC1P33527 1531 aa22.61■■□□□ 1.21
TOM1L1-221ENST00000575882 PRKCSHP14314 528 aaPredicted RBP22.61■■□□□ 1.21
TOM1L1-221ENST00000575882 CDCA8Q53HL2 280 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms