RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 FAM135AQ9P2D6 1515 aa9.72□□□□□ -0.85
SMG6-219ENST00000575663 SYNMO15061 1565 aa9.71□□□□□ -0.85
SMG6-219ENST00000575663 THEMISQ8N1K5 641 aaPredicted RBP9.71□□□□□ -0.86
SMG6-219ENST00000575663 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
SMG6-219ENST00000575663 MED14O60244 1454 aa9.71□□□□□ -0.86
SMG6-219ENST00000575663 PZPP20742 1482 aa9.71□□□□□ -0.86
SMG6-219ENST00000575663 NLRP1Q9C000 1473 aa9.71□□□□□ -0.86
SMG6-219ENST00000575663 KDM5DQ9BY66 1539 aa9.71□□□□□ -0.86
SMG6-219ENST00000575663 GPATCH8Q9UKJ3 1502 aaKnown RBP9.71□□□□□ -0.86
SMG6-219ENST00000575663 ALKQ9UM73 1620 aa9.71□□□□□ -0.86
SMG6-219ENST00000575663 LRRIQ1Q96JM4 1722 aa9.7□□□□□ -0.86
SMG6-219ENST00000575663 CFDP1Q9UEE9 299 aaPredicted RBP9.7□□□□□ -0.86
SMG6-219ENST00000575663 UGGT1Q9NYU2 1555 aa9.7□□□□□ -0.86
SMG6-219ENST00000575663 ADGBQ8N7X0 1667 aa9.7□□□□□ -0.86
SMG6-219ENST00000575663 DEPDC5O75140 1603 aa9.69□□□□□ -0.86
SMG6-219ENST00000575663 CCNB3Q8WWL7 1395 aa9.69□□□□□ -0.86
SMG6-219ENST00000575663 FYCO1Q9BQS8 1478 aa9.69□□□□□ -0.86
SMG6-219ENST00000575663 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
SMG6-219ENST00000575663 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
SMG6-219ENST00000575663 FBXO31Q5XUX0 539 aaPredicted RBP9.67□□□□□ -0.86
SMG6-219ENST00000575663 RGS17Q9UGC6 210 aaPredicted RBP9.67□□□□□ -0.86
SMG6-219ENST00000575663 RTEL1-TNFRSF6BF6WH68 1400 aa9.66□□□□□ -0.86
SMG6-219ENST00000575663 MIA2Q96PC5 1412 aa9.66□□□□□ -0.86
SMG6-219ENST00000575663 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
SMG6-219ENST00000575663 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
SMG6-219ENST00000575663 KIF3BO15066 747 aa9.64□□□□□ -0.87
SMG6-219ENST00000575663 MTUS2Q5JR59 1369 aa9.63□□□□□ -0.87
SMG6-219ENST00000575663 POTEAQ6S8J7 498 aa9.62□□□□□ -0.87
SMG6-219ENST00000575663 CCDC141Q6ZP82 1450 aa9.61□□□□□ -0.87
SMG6-219ENST00000575663 MBD5Q9P267 1494 aa9.61□□□□□ -0.87
SMG6-219ENST00000575663 FAM135BQ49AJ0 1406 aa9.61□□□□□ -0.87
SMG6-219ENST00000575663 SCAF11Q99590 1463 aaKnown RBP9.6□□□□□ -0.87
SMG6-219ENST00000575663 TIAM1Q13009 1591 aa9.59□□□□□ -0.87
SMG6-219ENST00000575663 STRCP1A6NGW2 1772 aa9.59□□□□□ -0.87
SMG6-219ENST00000575663 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
SMG6-219ENST00000575663 ZNF644Q9H582 1327 aaPredicted RBP9.58□□□□□ -0.88
SMG6-219ENST00000575663 EHBP1L1Q8N3D4 1523 aa9.58□□□□□ -0.88
SMG6-219ENST00000575663 ERVK-7P63135 1459 aa9.58□□□□□ -0.88
SMG6-219ENST00000575663 ZC3H13Q5T200 1668 aaKnown RBP9.58□□□□□ -0.88
SMG6-219ENST00000575663 RSPH4AQ5TD94 716 aa9.57□□□□□ -0.88
SMG6-219ENST00000575663 CHIC1Q5VXU3 224 aa9.56□□□□□ -0.88
SMG6-219ENST00000575663 EID1Q9Y6B2 187 aa9.56□□□□□ -0.88
SMG6-219ENST00000575663 ABCC3O15438 1527 aa9.56□□□□□ -0.88
SMG6-219ENST00000575663 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
SMG6-219ENST00000575663 CAMSAP2Q08AD1 1489 aa9.55□□□□□ -0.88
SMG6-219ENST00000575663 TMEM94Q12767 1356 aa9.55□□□□□ -0.88
SMG6-219ENST00000575663 SETD1AO15047 1707 aaKnown RBP9.55□□□□□ -0.88
SMG6-219ENST00000575663 SLIT1O75093 1534 aa9.55□□□□□ -0.88
SMG6-219ENST00000575663 ARHGAP23Q9P227 1491 aa9.54□□□□□ -0.88
SMG6-219ENST00000575663 JCADQ9P266 1359 aa9.54□□□□□ -0.88
SMG6-219ENST00000575663 TSPY4P0CV99 314 aa9.54□□□□□ -0.88
SMG6-219ENST00000575663 TSPY10P0CW01 314 aa9.54□□□□□ -0.88
SMG6-219ENST00000575663 TXNDC2Q86VQ3 553 aa9.54□□□□□ -0.88
SMG6-219ENST00000575663 ROBO1Q9Y6N7 1651 aa9.53□□□□□ -0.88
SMG6-219ENST00000575663 UBR1Q8IWV7 1749 aa9.53□□□□□ -0.88
SMG6-219ENST00000575663 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
SMG6-219ENST00000575663 ZNF772Q68DY9 489 aaPredicted RBP9.52□□□□□ -0.89
SMG6-219ENST00000575663 UPF1Q92900 1129 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMG6-219ENST00000575663 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
SMG6-219ENST00000575663 MSH6P52701 1360 aa9.51□□□□□ -0.89
SMG6-219ENST00000575663 ARHGEF5Q12774 1597 aa9.51□□□□□ -0.89
SMG6-219ENST00000575663 LTKP29376 864 aa9.51□□□□□ -0.89
SMG6-219ENST00000575663 MEX3CQ5U5Q3 659 aaKnown RBP9.51□□□□□ -0.89
SMG6-219ENST00000575663 EIF2AK4Q9P2K8 1649 aaKnown RBP9.51□□□□□ -0.89
SMG6-219ENST00000575663 NKTRP30414 1462 aaKnown RBP9.51□□□□□ -0.89
SMG6-219ENST00000575663 KCNA6P17658 529 aa9.5□□□□□ -0.89
SMG6-219ENST00000575663 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
SMG6-219ENST00000575663 PRDM15P57071 1507 aaPredicted RBP9.5□□□□□ -0.89
SMG6-219ENST00000575663 SPATA31A6Q5VVP1 1343 aa9.5□□□□□ -0.89
SMG6-219ENST00000575663 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
SMG6-219ENST00000575663 PROSER2Q86WR7 435 aaPredicted RBP9.49□□□□□ -0.89
SMG6-219ENST00000575663 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
SMG6-219ENST00000575663 XIRP1Q702N8 1843 aaKnown RBP9.49□□□□□ -0.89
SMG6-219ENST00000575663 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
SMG6-219ENST00000575663 FGD6Q6ZV73 1430 aa9.48□□□□□ -0.89
SMG6-219ENST00000575663 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
SMG6-219ENST00000575663 MAST1Q9Y2H9 1570 aa9.47□□□□□ -0.89
SMG6-219ENST00000575663 MROH1Q8NDA8 1641 aa9.47□□□□□ -0.89
SMG6-219ENST00000575663 EFCAB6Q5THR3 1501 aa9.46□□□□□ -0.89
SMG6-219ENST00000575663 NWD1Q149M9 1564 aa9.46□□□□□ -0.89
SMG6-219ENST00000575663 SLAIN2Q9P270 581 aa9.46□□□□□ -0.9
SMG6-219ENST00000575663 CDK12Q9NYV4 1490 aaPredicted RBP9.46□□□□□ -0.9
SMG6-219ENST00000575663 LRP6O75581 1613 aa9.45□□□□□ -0.9
SMG6-219ENST00000575663 RXRBP28702 533 aa9.45□□□□□ -0.9
SMG6-219ENST00000575663 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
SMG6-219ENST00000575663 SLC26A8Q96RN1 970 aa9.45□□□□□ -0.9
SMG6-219ENST00000575663 DUOX2Q9NRD8 1548 aa9.45□□□□□ -0.9
SMG6-219ENST00000575663 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
SMG6-219ENST00000575663 CEP152O94986 1710 aa9.45□□□□□ -0.9
SMG6-219ENST00000575663 BCANQ96GW7 911 aa9.44□□□□□ -0.9
SMG6-219ENST00000575663 PIK3C2BO00750 1634 aa9.44□□□□□ -0.9
SMG6-219ENST00000575663 KDM5AP29375 1690 aaKnown RBP9.43□□□□□ -0.9
SMG6-219ENST00000575663 ERBINQ96RT1 1412 aa9.43□□□□□ -0.9
SMG6-219ENST00000575663 KANK1Q14678 1352 aa9.43□□□□□ -0.9
SMG6-219ENST00000575663 FOXD1Q16676 465 aa9.43□□□□□ -0.9
SMG6-219ENST00000575663 TET3O43151 1660 aa9.42□□□□□ -0.9
SMG6-219ENST00000575663 ADGRB3O60242 1522 aa9.41□□□□□ -0.9
SMG6-219ENST00000575663 NCOA3Q9Y6Q9 1424 aa9.41□□□□□ -0.9
SMG6-219ENST00000575663 KIF15Q9NS87 1388 aa9.41□□□□□ -0.9
SMG6-219ENST00000575663 C14orf37Q86TY3 774 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms