RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 CEBPAP49715 358 aaPredicted RBP32.34■■■□□ 2.77
ABR-221ENST00000573559 ITGAEP38570 1179 aa32.33■■■□□ 2.77
ABR-221ENST00000573559 RNF17Q9BXT8 1623 aaKnown RBP32.33■■■□□ 2.77
ABR-221ENST00000573559 NCOA1Q15788 1441 aa32.32■■■□□ 2.76
ABR-221ENST00000573559 ERBINQ96RT1 1412 aa32.32■■■□□ 2.76
ABR-221ENST00000573559 PTPRKQ15262 1439 aa32.31■■■□□ 2.76
ABR-221ENST00000573559 KDM5DQ9BY66 1539 aa32.28■■■□□ 2.76
ABR-221ENST00000573559 PPP6R1Q9UPN7 881 aa32.28■■■□□ 2.76
ABR-221ENST00000573559 FAM135AQ9P2D6 1515 aa32.25■■■□□ 2.75
ABR-221ENST00000573559 ZMYM3Q14202 1370 aa32.24■■■□□ 2.75
ABR-221ENST00000573559 MROH1Q8NDA8 1641 aa32.22■■■□□ 2.75
ABR-221ENST00000573559 WASHC2CQ9Y4E1 1318 aa32.22■■■□□ 2.75
ABR-221ENST00000573559 ROCK1Q13464 1354 aa32.19■■■□□ 2.74
ABR-221ENST00000573559 ZC3H13Q5T200 1668 aaKnown RBP32.19■■■□□ 2.74
ABR-221ENST00000573559 PREX1Q8TCU6 1659 aa32.19■■■□□ 2.74
ABR-221ENST00000573559 CEP152O94986 1710 aa32.17■■■□□ 2.74
ABR-221ENST00000573559 PRDM15P57071 1507 aaPredicted RBP32.17■■■□□ 2.74
ABR-221ENST00000573559 DEPDC5O75140 1603 aa32.17■■■□□ 2.74
ABR-221ENST00000573559 ANKRD50Q9ULJ7 1429 aa32.17■■■□□ 2.74
ABR-221ENST00000573559 LMTK3Q96Q04 1460 aa32.16■■■□□ 2.74
ABR-221ENST00000573559 ABCC3O15438 1527 aa32.16■■■□□ 2.74
ABR-221ENST00000573559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.14■■■□□ 2.74
ABR-221ENST00000573559 SETD1BQ9UPS6 1966 aaKnown RBP32.13■■■□□ 2.73
ABR-221ENST00000573559 NPATQ14207 1427 aa32.11■■■□□ 2.73
ABR-221ENST00000573559 UHRF1BP1Q6BDS2 1440 aa32.1■■■□□ 2.73
ABR-221ENST00000573559 KANK1Q14678 1352 aa32.09■■■□□ 2.73
ABR-221ENST00000573559 CAMSAP1Q5T5Y3 1602 aa32.09■■■□□ 2.73
ABR-221ENST00000573559 PZPP20742 1482 aa32.08■■■□□ 2.73
ABR-221ENST00000573559 MYO3AQ8NEV4 1616 aa32.03■■■□□ 2.72
ABR-221ENST00000573559 HSPA2P54652 639 aa32.02■■■□□ 2.72
ABR-221ENST00000573559 UNC13BO14795 1591 aa32.01■■■□□ 2.71
ABR-221ENST00000573559 VWDEQ8N2E2 1590 aa32.01■■■□□ 2.71
ABR-221ENST00000573559 GCC2Q8IWJ2 1684 aa32■■■□□ 2.71
ABR-221ENST00000573559 FBXO31Q5XUX0 539 aaPredicted RBP32■■■□□ 2.71
ABR-221ENST00000573559 CFAP65Q6ZU64 1925 aaKnown RBP31.97■■■□□ 2.71
ABR-221ENST00000573559 TNRQ92752 1358 aa31.96■■■□□ 2.71
ABR-221ENST00000573559 LMTK2Q8IWU2 1503 aa31.96■■■□□ 2.71
ABR-221ENST00000573559 ZNF142P52746 1687 aaPredicted RBP31.95■■■□□ 2.7
ABR-221ENST00000573559 NAIPQ13075 1403 aa31.94■■■□□ 2.7
ABR-221ENST00000573559 ERVK-7P63135 1459 aa31.92■■■□□ 2.7
ABR-221ENST00000573559 CEP170BQ9Y4F5 1589 aaPredicted RBP31.92■■■□□ 2.7
ABR-221ENST00000573559 SPATA31D1Q6ZQQ2 1576 aa31.91■■■□□ 2.7
ABR-221ENST00000573559 ARHGAP31Q2M1Z3 1444 aa31.91■■■□□ 2.7
ABR-221ENST00000573559 EFCAB6Q5THR3 1501 aa31.9■■■□□ 2.7
ABR-221ENST00000573559 HFM1A2PYH4 1435 aa31.9■■■□□ 2.7
ABR-221ENST00000573559 IQGAP3Q86VI3 1631 aa31.88■■■□□ 2.69
ABR-221ENST00000573559 TET3O43151 1660 aa31.88■■■□□ 2.69
ABR-221ENST00000573559 A2ML1A8K2U0 1454 aa31.85■■■□□ 2.69
ABR-221ENST00000573559 NUP155O75694 1391 aa31.84■■■□□ 2.69
ABR-221ENST00000573559 NLRP1Q9C000 1473 aa31.84■■■□□ 2.69
ABR-221ENST00000573559 STRCQ7RTU9 1775 aa31.77■■■□□ 2.68
ABR-221ENST00000573559 RPRD2Q5VT52 1461 aaKnown RBP31.77■■■□□ 2.68
ABR-221ENST00000573559 E9PCH4 1651 aa31.76■■■□□ 2.68
ABR-221ENST00000573559 UGGT1Q9NYU2 1555 aa31.75■■■□□ 2.67
ABR-221ENST00000573559 SYNMO15061 1565 aa31.73■■■□□ 2.67
ABR-221ENST00000573559 TRIM52Q96A61 297 aa31.72■■■□□ 2.67
ABR-221ENST00000573559 NOS1P29475 1434 aa31.71■■■□□ 2.67
ABR-221ENST00000573559 PLA2R1Q13018 1463 aa31.7■■■□□ 2.66
ABR-221ENST00000573559 PIK3C2BO00750 1634 aa31.67■■■□□ 2.66
ABR-221ENST00000573559 UBR1Q8IWV7 1749 aa31.67■■■□□ 2.66
ABR-221ENST00000573559 THEMISQ8N1K5 641 aaPredicted RBP31.65■■■□□ 2.66
ABR-221ENST00000573559 NCKAP5LQ9HCH0 1330 aa31.64■■■□□ 2.66
ABR-221ENST00000573559 SETD5Q9C0A6 1442 aa31.63■■■□□ 2.65
ABR-221ENST00000573559 POLR1AO95602 1720 aaPredicted RBP31.63■■■□□ 2.65
ABR-221ENST00000573559 STAG3Q9UJ98 1225 aa31.61■■■□□ 2.65
ABR-221ENST00000573559 DMRT2Q9Y5R5 561 aa31.61■■■□□ 2.65
ABR-221ENST00000573559 SPHKAPQ2M3C7 1700 aa31.59■■■□□ 2.65
ABR-221ENST00000573559 IDI1Q13907 227 aa31.59■■■□□ 2.65
ABR-221ENST00000573559 PKD2Q13563 968 aa31.58■■■□□ 2.65
ABR-221ENST00000573559 SLC52A1Q9NWF4 448 aa31.57■■■□□ 2.64
ABR-221ENST00000573559 ADGRB3O60242 1522 aa31.57■■■□□ 2.64
ABR-221ENST00000573559 PTPRTO14522 1441 aa31.57■■■□□ 2.64
ABR-221ENST00000573559 SLC4A1APQ9BWU0 796 aaKnown RBP31.56■■■□□ 2.64
ABR-221ENST00000573559 KDM5AP29375 1690 aaKnown RBP31.56■■■□□ 2.64
ABR-221ENST00000573559 RAB3GAP2Q9H2M9 1393 aa31.55■■■□□ 2.64
ABR-221ENST00000573559 ANKLE2Q86XL3 938 aa31.53■■■□□ 2.64
ABR-221ENST00000573559 NEURL4Q96JN8 1562 aa31.52■■■□□ 2.64
ABR-221ENST00000573559 MYO5BQ9ULV0 1848 aa31.49■■■□□ 2.63
ABR-221ENST00000573559 SLIT1O75093 1534 aa31.49■■■□□ 2.63
ABR-221ENST00000573559 CHGAP10645 457 aaKnown RBP31.47■■■□□ 2.63
ABR-221ENST00000573559 ARHGAP23Q9P227 1491 aa31.46■■■□□ 2.63
ABR-221ENST00000573559 ACIN1Q9UKV3 1341 aaKnown RBP31.46■■■□□ 2.63
ABR-221ENST00000573559 TMEM131LA2VDJ0 1609 aa31.46■■■□□ 2.63
ABR-221ENST00000573559 TRPM2O94759 1503 aa31.45■■■□□ 2.63
ABR-221ENST00000573559 SCAF11Q99590 1463 aaKnown RBP31.45■■■□□ 2.62
ABR-221ENST00000573559 TMEM2Q9UHN6 1383 aa31.44■■■□□ 2.62
ABR-221ENST00000573559 IQGAP1P46940 1657 aa31.43■■■□□ 2.62
ABR-221ENST00000573559 NPHP4O75161 1426 aaPredicted RBP31.42■■■□□ 2.62
ABR-221ENST00000573559 MPHOSPH9Q99550 1183 aa31.42■■■□□ 2.62
ABR-221ENST00000573559 EID1Q9Y6B2 187 aa31.42■■■□□ 2.62
ABR-221ENST00000573559 CLTCL1P53675 1640 aa31.42■■■□□ 2.62
ABR-221ENST00000573559 MED14O60244 1454 aa31.41■■■□□ 2.62
ABR-221ENST00000573559 TXNDC2Q86VQ3 553 aa31.41■■■□□ 2.62
ABR-221ENST00000573559 FOXD1Q16676 465 aa31.4■■■□□ 2.62
ABR-221ENST00000573559 LTKP29376 864 aa31.39■■■□□ 2.62
ABR-221ENST00000573559 KIF1BO60333 1816 aa31.34■■■□□ 2.61
ABR-221ENST00000573559 RIMS2Q9UQ26 1411 aa31.33■■■□□ 2.61
ABR-221ENST00000573559 ZFYVE9O95405 1425 aa31.31■■■□□ 2.6
ABR-221ENST00000573559 ZNF335Q9H4Z2 1342 aaPredicted RBP31.3■■■□□ 2.6
ABR-221ENST00000573559 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms