RNA–Protein interactions for RNA: ENST00000570193.5

PKD1-239, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-239ENST00000570193 NPATQ14207 1427 aa23.83■■□□□ 1.4
PKD1-239ENST00000570193 KIF15Q9NS87 1388 aa23.82■■□□□ 1.4
PKD1-239ENST00000570193 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
PKD1-239ENST00000570193 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
PKD1-239ENST00000570193 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
PKD1-239ENST00000570193 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
PKD1-239ENST00000570193 PTPRKQ15262 1439 aa23.78■■□□□ 1.4
PKD1-239ENST00000570193 ANKRD30AQ9BXX3 1397 aa23.78■■□□□ 1.4
PKD1-239ENST00000570193 FAM135AQ9P2D6 1515 aa23.75■■□□□ 1.39
PKD1-239ENST00000570193 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
PKD1-239ENST00000570193 FBXO31Q5XUX0 539 aaPredicted RBP23.73■■□□□ 1.39
PKD1-239ENST00000570193 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
PKD1-239ENST00000570193 RNF17Q9BXT8 1623 aaKnown RBP23.72■■□□□ 1.39
PKD1-239ENST00000570193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.39
PKD1-239ENST00000570193 NCOA1Q15788 1441 aa23.7■■□□□ 1.38
PKD1-239ENST00000570193 DMRT2Q9Y5R5 561 aa23.7■■□□□ 1.38
PKD1-239ENST00000570193 PZPP20742 1482 aa23.69■■□□□ 1.38
PKD1-239ENST00000570193 TNRQ92752 1358 aa23.68■■□□□ 1.38
PKD1-239ENST00000570193 ABCC3O15438 1527 aa23.67■■□□□ 1.38
PKD1-239ENST00000570193 MYO3AQ8NEV4 1616 aa23.66■■□□□ 1.38
PKD1-239ENST00000570193 ITGAEP38570 1179 aa23.66■■□□□ 1.38
PKD1-239ENST00000570193 ADGRL2O95490 1459 aa23.65■■□□□ 1.38
PKD1-239ENST00000570193 KANK1Q14678 1352 aa23.65■■□□□ 1.38
PKD1-239ENST00000570193 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.38
PKD1-239ENST00000570193 ZC3H13Q5T200 1668 aaKnown RBP23.64■■□□□ 1.37
PKD1-239ENST00000570193 CEP170BQ9Y4F5 1589 aaPredicted RBP23.63■■□□□ 1.37
PKD1-239ENST00000570193 CAMSAP1Q5T5Y3 1602 aa23.62■■□□□ 1.37
PKD1-239ENST00000570193 STRCQ7RTU9 1775 aa23.62■■□□□ 1.37
PKD1-239ENST00000570193 A2ML1A8K2U0 1454 aa23.6■■□□□ 1.37
PKD1-239ENST00000570193 PRDM15P57071 1507 aaPredicted RBP23.59■■□□□ 1.37
PKD1-239ENST00000570193 CEP152O94986 1710 aa23.59■■□□□ 1.37
PKD1-239ENST00000570193 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
PKD1-239ENST00000570193 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
PKD1-239ENST00000570193 NCKAP5LQ9HCH0 1330 aa23.59■■□□□ 1.37
PKD1-239ENST00000570193 ILDR1Q86SU0 546 aaPredicted RBP23.58■■□□□ 1.37
PKD1-239ENST00000570193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
PKD1-239ENST00000570193 PTPRTO14522 1441 aa23.56■■□□□ 1.36
PKD1-239ENST00000570193 DEPDC5O75140 1603 aa23.55■■□□□ 1.36
PKD1-239ENST00000570193 ERVK-7P63135 1459 aa23.55■■□□□ 1.36
PKD1-239ENST00000570193 NLRP1Q9C000 1473 aa23.55■■□□□ 1.36
PKD1-239ENST00000570193 ROCK1Q13464 1354 aa23.54■■□□□ 1.36
PKD1-239ENST00000570193 PKD2Q13563 968 aa23.54■■□□□ 1.36
PKD1-239ENST00000570193 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
PKD1-239ENST00000570193 THEMISQ8N1K5 641 aaPredicted RBP23.53■■□□□ 1.36
PKD1-239ENST00000570193 SPATA31D1Q6ZQQ2 1576 aa23.52■■□□□ 1.36
PKD1-239ENST00000570193 ARHGAP31Q2M1Z3 1444 aa23.51■■□□□ 1.35
PKD1-239ENST00000570193 CFAP65Q6ZU64 1925 aaKnown RBP23.49■■□□□ 1.35
PKD1-239ENST00000570193 CERKQ8TCT0 537 aa23.49■■□□□ 1.35
PKD1-239ENST00000570193 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
PKD1-239ENST00000570193 UGGT1Q9NYU2 1555 aa23.48■■□□□ 1.35
PKD1-239ENST00000570193 FBXO41Q8TF61 875 aa23.47■■□□□ 1.35
PKD1-239ENST00000570193 LMTK2Q8IWU2 1503 aa23.47■■□□□ 1.35
PKD1-239ENST00000570193 ANKLE2Q86XL3 938 aa23.46■■□□□ 1.35
PKD1-239ENST00000570193 VWDEQ8N2E2 1590 aa23.46■■□□□ 1.35
PKD1-239ENST00000570193 STAG3Q9UJ98 1225 aa23.42■■□□□ 1.34
PKD1-239ENST00000570193 EFCAB6Q5THR3 1501 aa23.4■■□□□ 1.34
PKD1-239ENST00000570193 UNC13BO14795 1591 aa23.38■■□□□ 1.33
PKD1-239ENST00000570193 NUP155O75694 1391 aa23.38■■□□□ 1.33
PKD1-239ENST00000570193 ZNF335Q9H4Z2 1342 aaPredicted RBP23.36■■□□□ 1.33
PKD1-239ENST00000570193 IDI1Q13907 227 aa23.36■■□□□ 1.33
PKD1-239ENST00000570193 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
PKD1-239ENST00000570193 NOS1P29475 1434 aa23.34■■□□□ 1.33
PKD1-239ENST00000570193 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
PKD1-239ENST00000570193 TET3O43151 1660 aa23.34■■□□□ 1.33
PKD1-239ENST00000570193 NPHP4O75161 1426 aaPredicted RBP23.33■■□□□ 1.33
PKD1-239ENST00000570193 UBR1Q8IWV7 1749 aa23.33■■□□□ 1.33
PKD1-239ENST00000570193 NEURL4Q96JN8 1562 aa23.33■■□□□ 1.33
PKD1-239ENST00000570193 SLC52A1Q9NWF4 448 aa23.33■■□□□ 1.33
PKD1-239ENST00000570193 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
PKD1-239ENST00000570193 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
PKD1-239ENST00000570193 LTBP4Q8N2S1 1624 aa23.32■■□□□ 1.32
PKD1-239ENST00000570193 SYNMO15061 1565 aa23.31■■□□□ 1.32
PKD1-239ENST00000570193 PIK3C2BO00750 1634 aa23.31■■□□□ 1.32
PKD1-239ENST00000570193 NAIPQ13075 1403 aa23.29■■□□□ 1.32
PKD1-239ENST00000570193 IQGAP3Q86VI3 1631 aa23.29■■□□□ 1.32
PKD1-239ENST00000570193 MED14O60244 1454 aa23.29■■□□□ 1.32
PKD1-239ENST00000570193 GCC2Q8IWJ2 1684 aa23.28■■□□□ 1.32
PKD1-239ENST00000570193 LTKP29376 864 aa23.27■■□□□ 1.32
PKD1-239ENST00000570193 SCAF11Q99590 1463 aaKnown RBP23.27■■□□□ 1.32
PKD1-239ENST00000570193 TMEM2Q9UHN6 1383 aa23.27■■□□□ 1.31
PKD1-239ENST00000570193 ARHGAP23Q9P227 1491 aa23.25■■□□□ 1.31
PKD1-239ENST00000570193 SLIT1O75093 1534 aa23.25■■□□□ 1.31
PKD1-239ENST00000570193 CHGAP10645 457 aaKnown RBP23.25■■□□□ 1.31
PKD1-239ENST00000570193 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
PKD1-239ENST00000570193 IQGAP1P46940 1657 aa23.24■■□□□ 1.31
PKD1-239ENST00000570193 E9PCH4 1651 aa23.23■■□□□ 1.31
PKD1-239ENST00000570193 HFM1A2PYH4 1435 aa23.23■■□□□ 1.31
PKD1-239ENST00000570193 ADGRB3O60242 1522 aa23.22■■□□□ 1.31
PKD1-239ENST00000570193 KDM5AP29375 1690 aaKnown RBP23.21■■□□□ 1.31
PKD1-239ENST00000570193 IQSEC2Q5JU85 1478 aa23.2■■□□□ 1.3
PKD1-239ENST00000570193 BCANQ96GW7 911 aa23.18■■□□□ 1.3
PKD1-239ENST00000570193 HDGFP51858 240 aaKnown RBP23.17■■□□□ 1.3
PKD1-239ENST00000570193 CPS1P31327 1500 aa23.17■■□□□ 1.3
PKD1-239ENST00000570193 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
PKD1-239ENST00000570193 UBAP1LF5GYI3 381 aa23.14■■□□□ 1.29
PKD1-239ENST00000570193 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
PKD1-239ENST00000570193 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
PKD1-239ENST00000570193 SLC26A8Q96RN1 970 aa23.12■■□□□ 1.29
PKD1-239ENST00000570193 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
PKD1-239ENST00000570193 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms