RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 TNIKQ9UKE5 1360 aa7.9□□□□□ -1.14
CNOT1-219ENST00000569882 BCL11BQ9C0K0 894 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-219ENST00000569882 PRXQ9BXM0 1461 aa7.88□□□□□ -1.15
CNOT1-219ENST00000569882 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
CNOT1-219ENST00000569882 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
CNOT1-219ENST00000569882 KIAA0556O60303 1618 aa7.88□□□□□ -1.15
CNOT1-219ENST00000569882 PHF8Q9UPP1 1060 aa7.87□□□□□ -1.15
CNOT1-219ENST00000569882 STK24Q9Y6E0 443 aa7.87□□□□□ -1.15
CNOT1-219ENST00000569882 ADCY10Q96PN6 1610 aa7.87□□□□□ -1.15
CNOT1-219ENST00000569882 UGGT2Q9NYU1 1516 aa7.87□□□□□ -1.15
CNOT1-219ENST00000569882 STK25O00506 426 aa7.86□□□□□ -1.15
CNOT1-219ENST00000569882 PTGER2P43116 358 aa7.86□□□□□ -1.15
CNOT1-219ENST00000569882 P3H3Q8IVL6 736 aa7.86□□□□□ -1.15
CNOT1-219ENST00000569882 MS4A4AQ96JQ5 239 aa7.86□□□□□ -1.15
CNOT1-219ENST00000569882 BOLA1Q9Y3E2 137 aa7.86□□□□□ -1.15
CNOT1-219ENST00000569882 KIF21BO75037 1637 aa7.85□□□□□ -1.15
CNOT1-219ENST00000569882 DISP1Q96F81 1524 aa7.84□□□□□ -1.15
CNOT1-219ENST00000569882 FAM69CQ0P6D2 419 aa7.84□□□□□ -1.15
CNOT1-219ENST00000569882 UACAQ9BZF9 1416 aa7.84□□□□□ -1.15
CNOT1-219ENST00000569882 TSPOAP1O95153 1857 aa7.83□□□□□ -1.16
CNOT1-219ENST00000569882 SOX12O15370 315 aa7.83□□□□□ -1.16
CNOT1-219ENST00000569882 MAPKBP1O60336 1514 aa7.83□□□□□ -1.16
CNOT1-219ENST00000569882 ABCC2Q92887 1545 aa7.83□□□□□ -1.16
CNOT1-219ENST00000569882 TAOK2Q9UL54 1235 aa7.82□□□□□ -1.16
CNOT1-219ENST00000569882 KIF13AQ9H1H9 1805 aa7.82□□□□□ -1.16
CNOT1-219ENST00000569882 ARID3CA6NKF2 412 aa7.81□□□□□ -1.16
CNOT1-219ENST00000569882 G3V3G9 751 aa7.81□□□□□ -1.16
CNOT1-219ENST00000569882 HOXB1P14653 301 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-219ENST00000569882 MFRPQ9BY79 579 aa7.81□□□□□ -1.16
CNOT1-219ENST00000569882 FBXO22Q8NEZ5 403 aa7.8□□□□□ -1.16
CNOT1-219ENST00000569882 ATP1B4Q9UN42 357 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-219ENST00000569882 ZCCHC11Q5TAX3 1644 aaKnown RBP7.8□□□□□ -1.16
CNOT1-219ENST00000569882 UHRF1BP1LA0JNW5 1464 aa7.8□□□□□ -1.16
CNOT1-219ENST00000569882 PLB1Q6P1J6 1458 aa7.8□□□□□ -1.16
CNOT1-219ENST00000569882 VARS2Q5ST30 1063 aaKnown RBP7.79□□□□□ -1.16
CNOT1-219ENST00000569882 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
CNOT1-219ENST00000569882 ABCC10Q5T3U5 1492 aa7.79□□□□□ -1.16
CNOT1-219ENST00000569882 DIP2BQ9P265 1576 aa7.79□□□□□ -1.16
CNOT1-219ENST00000569882 ASXL2Q76L83 1435 aa7.78□□□□□ -1.16
CNOT1-219ENST00000569882 EFCAB5A4FU69 1503 aa7.78□□□□□ -1.16
CNOT1-219ENST00000569882 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
CNOT1-219ENST00000569882 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
CNOT1-219ENST00000569882 SAMD9Q5K651 1589 aa7.77□□□□□ -1.17
CNOT1-219ENST00000569882 NLRP6P59044 892 aa7.77□□□□□ -1.17
CNOT1-219ENST00000569882 TMEM92Q6UXU6 159 aa7.77□□□□□ -1.17
CNOT1-219ENST00000569882 KCNH8Q96L42 1107 aa7.77□□□□□ -1.17
CNOT1-219ENST00000569882 RAPGEF6Q8TEU7 1601 aa7.77□□□□□ -1.17
CNOT1-219ENST00000569882 FHOD3Q2V2M9 1422 aa7.77□□□□□ -1.17
CNOT1-219ENST00000569882 RIMBP2O15034 1052 aa7.76□□□□□ -1.17
CNOT1-219ENST00000569882 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
CNOT1-219ENST00000569882 ABCA8O94911 1581 aa7.76□□□□□ -1.17
CNOT1-219ENST00000569882 WDR7Q9Y4E6 1490 aa7.75□□□□□ -1.17
CNOT1-219ENST00000569882 KDM6BO15054 1643 aa7.74□□□□□ -1.17
CNOT1-219ENST00000569882 HOXB3P14651 431 aaPredicted RBP7.74□□□□□ -1.17
CNOT1-219ENST00000569882 TEX14Q8IWB6 1497 aa7.74□□□□□ -1.17
CNOT1-219ENST00000569882 FMN1Q68DA7 1419 aa7.73□□□□□ -1.17
CNOT1-219ENST00000569882 ANKRD13DQ6ZTN6 518 aa7.73□□□□□ -1.17
CNOT1-219ENST00000569882 CHGAP10645 457 aaKnown RBP7.72□□□□□ -1.17
CNOT1-219ENST00000569882 EPRSP07814 1512 aaKnown RBP7.72□□□□□ -1.17
CNOT1-219ENST00000569882 GLI2P10070 1586 aa7.71□□□□□ -1.17
CNOT1-219ENST00000569882 HECW1Q76N89 1606 aa7.71□□□□□ -1.17
CNOT1-219ENST00000569882 PLEKHD1A6NEE1 506 aa7.71□□□□□ -1.18
CNOT1-219ENST00000569882 PPP1R37O75864 691 aa7.71□□□□□ -1.18
CNOT1-219ENST00000569882 HS6ST3Q8IZP7 471 aa7.71□□□□□ -1.18
CNOT1-219ENST00000569882 ZNF687Q8N1G0 1237 aa7.71□□□□□ -1.18
CNOT1-219ENST00000569882 CFAP43Q8NDM7 1665 aa7.7□□□□□ -1.18
CNOT1-219ENST00000569882 CDK11AQ9UQ88 783 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-219ENST00000569882 MAP3K4Q9Y6R4 1608 aa7.7□□□□□ -1.18
CNOT1-219ENST00000569882 CD109Q6YHK3 1445 aa7.69□□□□□ -1.18
CNOT1-219ENST00000569882 ATP10BO94823 1461 aa7.69□□□□□ -1.18
CNOT1-219ENST00000569882 CLIP1P30622 1438 aa7.69□□□□□ -1.18
CNOT1-219ENST00000569882 NUP153P49790 1475 aaKnown RBP7.68□□□□□ -1.18
CNOT1-219ENST00000569882 ARHGAP35Q9NRY4 1499 aa7.68□□□□□ -1.18
CNOT1-219ENST00000569882 NKX1-1Q15270 411 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-219ENST00000569882 CDK13Q14004 1512 aaKnown RBP7.66□□□□□ -1.18
CNOT1-219ENST00000569882 PPRC1Q5VV67 1664 aaKnown RBP7.66□□□□□ -1.18
CNOT1-219ENST00000569882 PCF11O94913 1555 aaKnown RBP7.65□□□□□ -1.18
CNOT1-219ENST00000569882 KIF14Q15058 1648 aa7.64□□□□□ -1.19
CNOT1-219ENST00000569882 ABCA9Q8IUA7 1624 aa7.64□□□□□ -1.19
CNOT1-219ENST00000569882 CFAP74Q9C0B2 1584 aa7.64□□□□□ -1.19
CNOT1-219ENST00000569882 CCDC18Q5T9S5 1454 aa7.64□□□□□ -1.19
CNOT1-219ENST00000569882 HCSTQ9UBK5 93 aa7.64□□□□□ -1.19
CNOT1-219ENST00000569882 MAGI3Q5TCQ9 1506 aa7.63□□□□□ -1.19
CNOT1-219ENST00000569882 CEP162Q5TB80 1403 aa7.63□□□□□ -1.19
CNOT1-219ENST00000569882 C2orf72A6NCS6 295 aa7.63□□□□□ -1.19
CNOT1-219ENST00000569882 MYO5CQ9NQX4 1742 aa7.63□□□□□ -1.19
CNOT1-219ENST00000569882 FYCO1Q9BQS8 1478 aa7.62□□□□□ -1.19
CNOT1-219ENST00000569882 KIF3CO14782 793 aa7.62□□□□□ -1.19
CNOT1-219ENST00000569882 CASKIN1Q8WXD9 1431 aa7.61□□□□□ -1.19
CNOT1-219ENST00000569882 FANCAO15360 1455 aa7.61□□□□□ -1.19
CNOT1-219ENST00000569882 PHLDB1Q86UU1 1377 aa7.6□□□□□ -1.19
CNOT1-219ENST00000569882 TTC37Q6PGP7 1564 aa7.6□□□□□ -1.19
CNOT1-219ENST00000569882 LOC105371045A0A1W2PR82 267 aa7.6□□□□□ -1.19
CNOT1-219ENST00000569882 IRX2Q9BZI1 471 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-219ENST00000569882 ZSWIM6Q9HCJ5 1215 aa7.6□□□□□ -1.19
CNOT1-219ENST00000569882 ARHGAP5Q13017 1502 aa7.6□□□□□ -1.19
CNOT1-219ENST00000569882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.6□□□□□ -1.19
CNOT1-219ENST00000569882 TROQ12816 1431 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-219ENST00000569882 MTUS2Q5JR59 1369 aa7.59□□□□□ -1.19
CNOT1-219ENST00000569882 ARID4BQ4LE39 1312 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms