RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 FGD6Q6ZV73 1430 aa14.11□□□□□ -0.15
SNX29-208ENST00000569801 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
SNX29-208ENST00000569801 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
SNX29-208ENST00000569801 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
SNX29-208ENST00000569801 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
SNX29-208ENST00000569801 DIP2CQ9Y2E4 1556 aa14.08□□□□□ -0.16
SNX29-208ENST00000569801 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
SNX29-208ENST00000569801 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
SNX29-208ENST00000569801 NWD1Q149M9 1564 aa14.07□□□□□ -0.16
SNX29-208ENST00000569801 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
SNX29-208ENST00000569801 THEMISQ8N1K5 641 aaPredicted RBP14.06□□□□□ -0.16
SNX29-208ENST00000569801 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
SNX29-208ENST00000569801 EP400Q96L91 3159 aa14.06□□□□□ -0.16
SNX29-208ENST00000569801 MROH2AA6NES4 1674 aa14.05□□□□□ -0.16
SNX29-208ENST00000569801 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
SNX29-208ENST00000569801 GIGYF1O75420 1035 aaPredicted RBP14.05□□□□□ -0.16
SNX29-208ENST00000569801 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
SNX29-208ENST00000569801 PLCH2O75038 1416 aa14.05□□□□□ -0.16
SNX29-208ENST00000569801 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
SNX29-208ENST00000569801 GOLGA3Q08378 1498 aa14.03□□□□□ -0.16
SNX29-208ENST00000569801 ZNF518AQ6AHZ1 1483 aa14.03□□□□□ -0.16
SNX29-208ENST00000569801 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
SNX29-208ENST00000569801 ABCC1P33527 1531 aa14.02□□□□□ -0.16
SNX29-208ENST00000569801 KDM5DQ9BY66 1539 aa14.02□□□□□ -0.16
SNX29-208ENST00000569801 LRRC9Q6ZRR7 1453 aa14.02□□□□□ -0.16
SNX29-208ENST00000569801 SF3B2Q13435 895 aaKnown RBP14.02□□□□□ -0.17
SNX29-208ENST00000569801 COL16A1Q07092 1604 aaPredicted RBP14.01□□□□□ -0.17
SNX29-208ENST00000569801 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
SNX29-208ENST00000569801 COL13A1Q5TAT6 717 aaPredicted RBP14□□□□□ -0.17
SNX29-208ENST00000569801 EFCAB2Q5VUJ9 269 aa14□□□□□ -0.17
SNX29-208ENST00000569801 IQGAP1P46940 1657 aa13.97□□□□□ -0.17
SNX29-208ENST00000569801 DEPDC5O75140 1603 aa13.97□□□□□ -0.17
SNX29-208ENST00000569801 KDM5CP41229 1560 aa13.96□□□□□ -0.17
SNX29-208ENST00000569801 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
SNX29-208ENST00000569801 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
SNX29-208ENST00000569801 P3H3Q8IVL6 736 aa13.95□□□□□ -0.18
SNX29-208ENST00000569801 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
SNX29-208ENST00000569801 TNRQ92752 1358 aa13.95□□□□□ -0.18
SNX29-208ENST00000569801 FBXO31Q5XUX0 539 aaPredicted RBP13.94□□□□□ -0.18
SNX29-208ENST00000569801 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
SNX29-208ENST00000569801 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
SNX29-208ENST00000569801 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
SNX29-208ENST00000569801 RTEL1-TNFRSF6BF6WH68 1400 aa13.92□□□□□ -0.18
SNX29-208ENST00000569801 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
SNX29-208ENST00000569801 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
SNX29-208ENST00000569801 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
SNX29-208ENST00000569801 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
SNX29-208ENST00000569801 CLTCQ00610 1675 aaKnown RBP13.89□□□□□ -0.19
SNX29-208ENST00000569801 SHPRHQ149N8 1683 aa13.89□□□□□ -0.19
SNX29-208ENST00000569801 GGT6Q6P531 493 aa13.89□□□□□ -0.19
SNX29-208ENST00000569801 USP21Q9UK80 565 aa13.89□□□□□ -0.19
SNX29-208ENST00000569801 NINLQ9Y2I6 1382 aa13.87□□□□□ -0.19
SNX29-208ENST00000569801 EEA1Q15075 1411 aa13.87□□□□□ -0.19
SNX29-208ENST00000569801 MSH6P52701 1360 aa13.86□□□□□ -0.19
SNX29-208ENST00000569801 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
SNX29-208ENST00000569801 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
SNX29-208ENST00000569801 ADAMTS2O95450 1211 aa13.85□□□□□ -0.19
SNX29-208ENST00000569801 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
SNX29-208ENST00000569801 HSPA6P17066 643 aa13.84□□□□□ -0.19
SNX29-208ENST00000569801 BAG6P46379 1132 aa13.84□□□□□ -0.19
SNX29-208ENST00000569801 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
SNX29-208ENST00000569801 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
SNX29-208ENST00000569801 NUP153P49790 1475 aaKnown RBP13.82□□□□□ -0.2
SNX29-208ENST00000569801 KCNA6P17658 529 aa13.8□□□□□ -0.2
SNX29-208ENST00000569801 ATRNO75882 1429 aa13.8□□□□□ -0.2
SNX29-208ENST00000569801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNX29-208ENST00000569801 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
SNX29-208ENST00000569801 CAMTA1Q9Y6Y1 1673 aa13.78□□□□□ -0.2
SNX29-208ENST00000569801 EN1Q05925 392 aaPredicted RBP13.77□□□□□ -0.21
SNX29-208ENST00000569801 DIP2AQ14689 1571 aa13.77□□□□□ -0.21
SNX29-208ENST00000569801 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.21
SNX29-208ENST00000569801 MIA2Q96PC5 1412 aa13.77□□□□□ -0.21
SNX29-208ENST00000569801 NLRP1Q9C000 1473 aa13.76□□□□□ -0.21
SNX29-208ENST00000569801 LTKP29376 864 aa13.76□□□□□ -0.21
SNX29-208ENST00000569801 FNBP4Q8N3X1 1017 aaPredicted RBP13.76□□□□□ -0.21
SNX29-208ENST00000569801 TXNDC2Q86VQ3 553 aa13.74□□□□□ -0.21
SNX29-208ENST00000569801 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
SNX29-208ENST00000569801 GJD4Q96KN9 370 aaPredicted RBP13.73□□□□□ -0.21
SNX29-208ENST00000569801 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
SNX29-208ENST00000569801 PRDM15P57071 1507 aaPredicted RBP13.72□□□□□ -0.21
SNX29-208ENST00000569801 KIF14Q15058 1648 aa13.72□□□□□ -0.21
SNX29-208ENST00000569801 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.21
SNX29-208ENST00000569801 TIAM1Q13009 1591 aa13.71□□□□□ -0.22
SNX29-208ENST00000569801 SETD5Q9C0A6 1442 aa13.7□□□□□ -0.22
SNX29-208ENST00000569801 ABCC3O15438 1527 aa13.69□□□□□ -0.22
SNX29-208ENST00000569801 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
SNX29-208ENST00000569801 KCNQ2O43526 872 aa13.69□□□□□ -0.22
SNX29-208ENST00000569801 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
SNX29-208ENST00000569801 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
SNX29-208ENST00000569801 UTRNP46939 3433 aa13.69□□□□□ -0.22
SNX29-208ENST00000569801 UNC13BO14795 1591 aa13.68□□□□□ -0.22
SNX29-208ENST00000569801 PNPLA6Q8IY17 1366 aa13.68□□□□□ -0.22
SNX29-208ENST00000569801 KIDINS220Q9ULH0 1771 aa13.68□□□□□ -0.22
SNX29-208ENST00000569801 ARHGAP5Q13017 1502 aa13.67□□□□□ -0.22
SNX29-208ENST00000569801 PZPP20742 1482 aa13.67□□□□□ -0.22
SNX29-208ENST00000569801 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
SNX29-208ENST00000569801 DNAJC5GQ8N7S2 189 aa13.66□□□□□ -0.22
SNX29-208ENST00000569801 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
SNX29-208ENST00000569801 FAM83GA6ND36 823 aa13.64□□□□□ -0.23
SNX29-208ENST00000569801 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms