RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 WASHC2AQ641Q2 1341 aa8.89□□□□□ -0.99
KARS-211ENST00000569298 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
KARS-211ENST00000569298 IL27Q8NEV9 243 aa8.88□□□□□ -0.99
KARS-211ENST00000569298 CENPJQ9HC77 1338 aaPredicted RBP8.86□□□□□ -0.99
KARS-211ENST00000569298 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
KARS-211ENST00000569298 DSG2Q14126 1118 aa8.85□□□□□ -0.99
KARS-211ENST00000569298 PLPP6Q8IY26 295 aa8.85□□□□□ -0.99
KARS-211ENST00000569298 KHSRPQ92945 711 aaKnown RBP eCLIP8.85□□□□□ -0.99
KARS-211ENST00000569298 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
KARS-211ENST00000569298 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
KARS-211ENST00000569298 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
KARS-211ENST00000569298 BCCIPQ9P287 314 aaKnown RBP eCLIP8.85□□□□□ -0.99
KARS-211ENST00000569298 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
KARS-211ENST00000569298 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
KARS-211ENST00000569298 NOP58Q9Y2X3 529 aaKnown RBP8.84□□□□□ -0.99
KARS-211ENST00000569298 NCLP19338 710 aaKnown RBP8.83□□□□□ -1
KARS-211ENST00000569298 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
KARS-211ENST00000569298 NCKAP5LQ9HCH0 1330 aa8.81□□□□□ -1
KARS-211ENST00000569298 NUDT7P0C024 238 aa8.81□□□□□ -1
KARS-211ENST00000569298 PDE4AP27815 886 aa8.81□□□□□ -1
KARS-211ENST00000569298 CALD1Q05682 793 aaKnown RBP8.81□□□□□ -1
KARS-211ENST00000569298 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
KARS-211ENST00000569298 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
KARS-211ENST00000569298 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
KARS-211ENST00000569298 A0A0U1RQG5 324 aaPredicted RBP8.79□□□□□ -1
KARS-211ENST00000569298 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
KARS-211ENST00000569298 TULP1O00294 542 aaPredicted RBP8.79□□□□□ -1
KARS-211ENST00000569298 P3H3Q8IVL6 736 aa8.79□□□□□ -1
KARS-211ENST00000569298 NAP1L5Q96NT1 182 aaPredicted RBP8.79□□□□□ -1
KARS-211ENST00000569298 WDR70Q9NW82 654 aa8.79□□□□□ -1
KARS-211ENST00000569298 HSP90AA2PQ14568 343 aaPredicted RBP8.78□□□□□ -1
KARS-211ENST00000569298 PPP1R15BQ5SWA1 713 aa8.78□□□□□ -1
KARS-211ENST00000569298 IPO4Q8TEX9 1081 aaKnown RBP8.78□□□□□ -1
KARS-211ENST00000569298 HSP90B1P14625 803 aaKnown RBP8.77□□□□□ -1.01
KARS-211ENST00000569298 LHX6Q9UPM6 363 aa8.77□□□□□ -1.01
KARS-211ENST00000569298 TBC1D12O60347 775 aa8.76□□□□□ -1.01
KARS-211ENST00000569298 LOC105371045A0A1W2PR82 267 aa8.75□□□□□ -1.01
KARS-211ENST00000569298 MFSD10Q14728 455 aa8.75□□□□□ -1.01
KARS-211ENST00000569298 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
KARS-211ENST00000569298 CHMP4AQ9BY43 222 aa8.75□□□□□ -1.01
KARS-211ENST00000569298 RB1CC1Q8TDY2 1594 aa8.74□□□□□ -1.01
KARS-211ENST00000569298 MMRN1Q13201 1228 aa8.74□□□□□ -1.01
KARS-211ENST00000569298 CADPS2Q86UW7 1296 aa8.74□□□□□ -1.01
KARS-211ENST00000569298 LARP6Q9BRS8 491 aaKnown RBP8.74□□□□□ -1.01
KARS-211ENST00000569298 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
KARS-211ENST00000569298 ARID3AQ99856 593 aa8.73□□□□□ -1.01
KARS-211ENST00000569298 NAP1L2Q9ULW6 460 aaPredicted RBP8.73□□□□□ -1.01
KARS-211ENST00000569298 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
KARS-211ENST00000569298 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
KARS-211ENST00000569298 PPM1GO15355 546 aaPredicted RBP8.71□□□□□ -1.02
KARS-211ENST00000569298 TEX2Q8IWB9 1127 aa8.71□□□□□ -1.02
KARS-211ENST00000569298 PRDM4Q9UKN5 801 aa8.71□□□□□ -1.02
KARS-211ENST00000569298 ARID4BQ4LE39 1312 aaPredicted RBP8.71□□□□□ -1.02
KARS-211ENST00000569298 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
KARS-211ENST00000569298 PBX2P40425 430 aa8.69□□□□□ -1.02
KARS-211ENST00000569298 UPF1Q92900 1129 aaKnown RBP eCLIP8.69□□□□□ -1.02
KARS-211ENST00000569298 IPO9Q96P70 1041 aaKnown RBP8.69□□□□□ -1.02
KARS-211ENST00000569298 NACADO15069 1562 aa8.69□□□□□ -1.02
KARS-211ENST00000569298 KCNV2Q8TDN2 545 aa8.68□□□□□ -1.02
KARS-211ENST00000569298 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
KARS-211ENST00000569298 CNGB1Q14028 1251 aaPredicted RBP8.67□□□□□ -1.02
KARS-211ENST00000569298 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
KARS-211ENST00000569298 CDK11BP21127 795 aaKnown RBP8.66□□□□□ -1.02
KARS-211ENST00000569298 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
KARS-211ENST00000569298 FTSJ3Q8IY81 847 aaKnown RBP8.66□□□□□ -1.02
KARS-211ENST00000569298 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
KARS-211ENST00000569298 HMGB1P09429 215 aaKnown RBP8.64□□□□□ -1.03
KARS-211ENST00000569298 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
KARS-211ENST00000569298 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
KARS-211ENST00000569298 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
KARS-211ENST00000569298 ARHGAP33O14559 1287 aa8.63□□□□□ -1.03
KARS-211ENST00000569298 NEFMP07197 916 aa8.63□□□□□ -1.03
KARS-211ENST00000569298 ANP32AP39687 249 aaKnown RBP8.63□□□□□ -1.03
KARS-211ENST00000569298 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
KARS-211ENST00000569298 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
KARS-211ENST00000569298 EVI5O60447 810 aa8.62□□□□□ -1.03
KARS-211ENST00000569298 GTF2E1P29083 439 aaPredicted RBP8.62□□□□□ -1.03
KARS-211ENST00000569298 PTGER2P43116 358 aa8.62□□□□□ -1.03
KARS-211ENST00000569298 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
KARS-211ENST00000569298 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
KARS-211ENST00000569298 MAP7D2Q96T17 732 aa8.62□□□□□ -1.03
KARS-211ENST00000569298 ANP32BQ92688 251 aaKnown RBP8.61□□□□□ -1.03
KARS-211ENST00000569298 E2F4Q16254 413 aa8.6□□□□□ -1.03
KARS-211ENST00000569298 STAC3Q96MF2 364 aa8.6□□□□□ -1.03
KARS-211ENST00000569298 FOSBP53539 338 aa8.59□□□□□ -1.03
KARS-211ENST00000569298 UTP14CQ5TAP6 766 aaKnown RBP8.59□□□□□ -1.03
KARS-211ENST00000569298 DHX37Q8IY37 1157 aaKnown RBP8.59□□□□□ -1.03
KARS-211ENST00000569298 SMAP1Q8IYB5 467 aaPredicted RBP8.59□□□□□ -1.03
KARS-211ENST00000569298 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
KARS-211ENST00000569298 PPP4R2Q9NY27 417 aa8.59□□□□□ -1.03
KARS-211ENST00000569298 TPM2P07951 284 aa8.58□□□□□ -1.04
KARS-211ENST00000569298 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
KARS-211ENST00000569298 PSEN2P49810 448 aa8.57□□□□□ -1.04
KARS-211ENST00000569298 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
KARS-211ENST00000569298 JPH4Q96JJ6 628 aa8.57□□□□□ -1.04
KARS-211ENST00000569298 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
KARS-211ENST00000569298 TK2O00142 265 aa8.56□□□□□ -1.04
KARS-211ENST00000569298 CLCN1P35523 988 aa8.56□□□□□ -1.04
KARS-211ENST00000569298 TAF3Q5VWG9 929 aa8.56□□□□□ -1.04
KARS-211ENST00000569298 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms