RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
VAC14-211ENST00000568886 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
VAC14-211ENST00000568886 KIF3BO15066 747 aa22.74■■□□□ 1.23
VAC14-211ENST00000568886 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
VAC14-211ENST00000568886 ARID4BQ4LE39 1312 aaPredicted RBP22.73■■□□□ 1.23
VAC14-211ENST00000568886 PRDM15P57071 1507 aaPredicted RBP22.73■■□□□ 1.23
VAC14-211ENST00000568886 UNC13BO14795 1591 aa22.73■■□□□ 1.23
VAC14-211ENST00000568886 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
VAC14-211ENST00000568886 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
VAC14-211ENST00000568886 KDM5DQ9BY66 1539 aa22.7■■□□□ 1.22
VAC14-211ENST00000568886 VWDEQ8N2E2 1590 aa22.68■■□□□ 1.22
VAC14-211ENST00000568886 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
VAC14-211ENST00000568886 ADAMTSL3P82987 1691 aa22.66■■□□□ 1.22
VAC14-211ENST00000568886 ZC3H13Q5T200 1668 aaKnown RBP22.65■■□□□ 1.22
VAC14-211ENST00000568886 KANK1Q14678 1352 aa22.65■■□□□ 1.22
VAC14-211ENST00000568886 GGT6Q6P531 493 aa22.65■■□□□ 1.22
VAC14-211ENST00000568886 CNTLNQ9NXG0 1405 aa22.64■■□□□ 1.22
VAC14-211ENST00000568886 LMTK2Q8IWU2 1503 aa22.64■■□□□ 1.21
VAC14-211ENST00000568886 IQGAP3Q86VI3 1631 aa22.62■■□□□ 1.21
VAC14-211ENST00000568886 ABCC3O15438 1527 aa22.61■■□□□ 1.21
VAC14-211ENST00000568886 MLECQ14165 292 aa22.6■■□□□ 1.21
VAC14-211ENST00000568886 DIEXFQ68CQ4 756 aaKnown RBP22.6■■□□□ 1.21
VAC14-211ENST00000568886 FER1L4A9Z1Z3 1794 aa22.6■■□□□ 1.21
VAC14-211ENST00000568886 MROH2AA6NES4 1674 aa22.59■■□□□ 1.21
VAC14-211ENST00000568886 NUP155O75694 1391 aa22.59■■□□□ 1.21
VAC14-211ENST00000568886 MADDQ8WXG6 1647 aa22.58■■□□□ 1.21
VAC14-211ENST00000568886 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
VAC14-211ENST00000568886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.56■■□□□ 1.22e-6■■□□□ 11.6
VAC14-211ENST00000568886 ESF1Q9H501 851 aaKnown RBP22.56■■□□□ 1.2
VAC14-211ENST00000568886 TET3O43151 1660 aa22.55■■□□□ 1.2
VAC14-211ENST00000568886 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
VAC14-211ENST00000568886 ARHGAP31Q2M1Z3 1444 aa22.54■■□□□ 1.2
VAC14-211ENST00000568886 CEP152O94986 1710 aa22.54■■□□□ 1.2
VAC14-211ENST00000568886 PZPP20742 1482 aa22.53■■□□□ 1.2
VAC14-211ENST00000568886 CAMSAP1Q5T5Y3 1602 aa22.53■■□□□ 1.2
VAC14-211ENST00000568886 EFCAB6Q5THR3 1501 aa22.53■■□□□ 1.2
VAC14-211ENST00000568886 TRIM52Q96A61 297 aa22.52■■□□□ 1.2
VAC14-211ENST00000568886 RIMS1Q86UR5 1692 aaKnown RBP22.51■■□□□ 1.19
VAC14-211ENST00000568886 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
VAC14-211ENST00000568886 RPRD2Q5VT52 1461 aaKnown RBP22.5■■□□□ 1.19
VAC14-211ENST00000568886 ZMYM3Q14202 1370 aa22.49■■□□□ 1.19
VAC14-211ENST00000568886 KDM4FA0A1W2PPD8 638 aa22.49■■□□□ 1.19
VAC14-211ENST00000568886 PTPRMP28827 1452 aa22.47■■□□□ 1.19
VAC14-211ENST00000568886 NPATQ14207 1427 aa22.46■■□□□ 1.19
VAC14-211ENST00000568886 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
VAC14-211ENST00000568886 C3P01024 1663 aa22.45■■□□□ 1.19
VAC14-211ENST00000568886 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.18
VAC14-211ENST00000568886 MPHOSPH9Q99550 1183 aa22.45■■□□□ 1.18
VAC14-211ENST00000568886 E9PCH4 1651 aa22.44■■□□□ 1.18
VAC14-211ENST00000568886 NEUROD1Q13562 356 aa22.42■■□□□ 1.18
VAC14-211ENST00000568886 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
VAC14-211ENST00000568886 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
VAC14-211ENST00000568886 ERVK-7P63135 1459 aa22.4■■□□□ 1.18
VAC14-211ENST00000568886 PKD2Q13563 968 aa22.39■■□□□ 1.18
VAC14-211ENST00000568886 NOS1P29475 1434 aa22.39■■□□□ 1.17
VAC14-211ENST00000568886 PREX1Q8TCU6 1659 aa22.39■■□□□ 1.17
VAC14-211ENST00000568886 PTPRTO14522 1441 aa22.38■■□□□ 1.17
VAC14-211ENST00000568886 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
VAC14-211ENST00000568886 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
VAC14-211ENST00000568886 CEBPAP49715 358 aaPredicted RBP22.33■■□□□ 1.17
VAC14-211ENST00000568886 TRPM2O94759 1503 aa22.33■■□□□ 1.17
VAC14-211ENST00000568886 TNRQ92752 1358 aa22.32■■□□□ 1.16
VAC14-211ENST00000568886 FBXO31Q5XUX0 539 aaPredicted RBP22.32■■□□□ 1.16
VAC14-211ENST00000568886 SYNMO15061 1565 aa22.31■■□□□ 1.16
VAC14-211ENST00000568886 PLA2R1Q13018 1463 aa22.3■■□□□ 1.16
VAC14-211ENST00000568886 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
VAC14-211ENST00000568886 SETD1BQ9UPS6 1966 aaKnown RBP22.29■■□□□ 1.16
VAC14-211ENST00000568886 PIK3C2BO00750 1634 aa22.28■■□□□ 1.16
VAC14-211ENST00000568886 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
VAC14-211ENST00000568886 ANKRD30BQ9BXX2 1392 aa22.28■■□□□ 1.16
VAC14-211ENST00000568886 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
VAC14-211ENST00000568886 FOXD1Q16676 465 aa22.25■■□□□ 1.15
VAC14-211ENST00000568886 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
VAC14-211ENST00000568886 CFAP65Q6ZU64 1925 aaKnown RBP22.25■■□□□ 1.15
VAC14-211ENST00000568886 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
VAC14-211ENST00000568886 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
VAC14-211ENST00000568886 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
VAC14-211ENST00000568886 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
VAC14-211ENST00000568886 UHRF1BP1Q6BDS2 1440 aa22.21■■□□□ 1.15
VAC14-211ENST00000568886 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
VAC14-211ENST00000568886 CLTCL1P53675 1640 aa22.21■■□□□ 1.15
VAC14-211ENST00000568886 NEURL4Q96JN8 1562 aa22.2■■□□□ 1.14
VAC14-211ENST00000568886 CEP170BQ9Y4F5 1589 aaPredicted RBP22.19■■□□□ 1.14
VAC14-211ENST00000568886 UGGT1Q9NYU2 1555 aa22.19■■□□□ 1.14
VAC14-211ENST00000568886 IDI1Q13907 227 aa22.19■■□□□ 1.14
VAC14-211ENST00000568886 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
VAC14-211ENST00000568886 ADGRB3O60242 1522 aa22.18■■□□□ 1.14
VAC14-211ENST00000568886 TMEM131LA2VDJ0 1609 aa22.15■■□□□ 1.14
VAC14-211ENST00000568886 UBR1Q8IWV7 1749 aa22.14■■□□□ 1.13
VAC14-211ENST00000568886 KIF1BO60333 1816 aa22.13■■□□□ 1.13
VAC14-211ENST00000568886 LMTK3Q96Q04 1460 aa22.12■■□□□ 1.13
VAC14-211ENST00000568886 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
VAC14-211ENST00000568886 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
VAC14-211ENST00000568886 SLIT1O75093 1534 aa22.08■■□□□ 1.13
VAC14-211ENST00000568886 MIER1Q8N108 512 aa22.08■■□□□ 1.12
VAC14-211ENST00000568886 STAG3Q9UJ98 1225 aa22.08■■□□□ 1.12
VAC14-211ENST00000568886 ARHGAP23Q9P227 1491 aa22.07■■□□□ 1.12
VAC14-211ENST00000568886 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
VAC14-211ENST00000568886 RPGRIP1LQ68CZ1 1315 aa22.05■■□□□ 1.12
VAC14-211ENST00000568886 TMEM2Q9UHN6 1383 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms