RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
VAC14-211ENST00000568886 CCDC180Q9P1Z9 1646 aa31.95■■■□□ 2.71
VAC14-211ENST00000568886 ABCC9O60706 1549 aa30.66■■■□□ 2.5
VAC14-211ENST00000568886 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
VAC14-211ENST00000568886 DCAF1Q9Y4B6 1507 aa30■■■□□ 2.39
VAC14-211ENST00000568886 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
VAC14-211ENST00000568886 NACADO15069 1562 aa29.93■■■□□ 2.38
VAC14-211ENST00000568886 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
VAC14-211ENST00000568886 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
VAC14-211ENST00000568886 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
VAC14-211ENST00000568886 SCRIBQ14160 1630 aa29.06■■■□□ 2.24
VAC14-211ENST00000568886 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
VAC14-211ENST00000568886 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
VAC14-211ENST00000568886 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
VAC14-211ENST00000568886 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
VAC14-211ENST00000568886 CECR2Q9BXF3 1484 aa28.01■■■□□ 2.07
VAC14-211ENST00000568886 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
VAC14-211ENST00000568886 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
VAC14-211ENST00000568886 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
VAC14-211ENST00000568886 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
VAC14-211ENST00000568886 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.03
VAC14-211ENST00000568886 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
VAC14-211ENST00000568886 SMARCA2P51531 1590 aa27.67■■■□□ 2.02
VAC14-211ENST00000568886 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
VAC14-211ENST00000568886 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.02
VAC14-211ENST00000568886 NCAPD3P42695 1498 aa27.6■■■□□ 2.01
VAC14-211ENST00000568886 HMGXB3Q12766 1538 aa27.52■■■□□ 2
VAC14-211ENST00000568886 WIZO95785 1651 aa27.49■■□□□ 1.99
VAC14-211ENST00000568886 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
VAC14-211ENST00000568886 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
VAC14-211ENST00000568886 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
VAC14-211ENST00000568886 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
VAC14-211ENST00000568886 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
VAC14-211ENST00000568886 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
VAC14-211ENST00000568886 CFTRP13569 1480 aa26.74■■□□□ 1.87
VAC14-211ENST00000568886 NESP48681 1621 aa26.67■■□□□ 1.86
VAC14-211ENST00000568886 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
VAC14-211ENST00000568886 PDS5BQ9NTI5 1447 aa26.58■■□□□ 1.85
VAC14-211ENST00000568886 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
VAC14-211ENST00000568886 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
VAC14-211ENST00000568886 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
VAC14-211ENST00000568886 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
VAC14-211ENST00000568886 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
VAC14-211ENST00000568886 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
VAC14-211ENST00000568886 WDR62O43379 1518 aa26.19■■□□□ 1.78
VAC14-211ENST00000568886 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
VAC14-211ENST00000568886 URB2Q14146 1524 aaKnown RBP26.16■■□□□ 1.78
VAC14-211ENST00000568886 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
VAC14-211ENST00000568886 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
VAC14-211ENST00000568886 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
VAC14-211ENST00000568886 CUX2O14529 1486 aa26.07■■□□□ 1.76
VAC14-211ENST00000568886 CUX1P39880 1505 aa26.06■■□□□ 1.76
VAC14-211ENST00000568886 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
VAC14-211ENST00000568886 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
VAC14-211ENST00000568886 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
VAC14-211ENST00000568886 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
VAC14-211ENST00000568886 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
VAC14-211ENST00000568886 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
VAC14-211ENST00000568886 TARBP1Q13395 1621 aaKnown RBP25.78■■□□□ 1.72
VAC14-211ENST00000568886 SOGA1O94964 1423 aa25.78■■□□□ 1.72
VAC14-211ENST00000568886 RAD54L2Q9Y4B4 1467 aa25.73■■□□□ 1.71
VAC14-211ENST00000568886 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
VAC14-211ENST00000568886 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
VAC14-211ENST00000568886 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
VAC14-211ENST00000568886 WDR97A6NE52 1622 aa25.71■■□□□ 1.71
VAC14-211ENST00000568886 ZNF608Q9ULD9 1512 aaPredicted RBP25.6■■□□□ 1.69
VAC14-211ENST00000568886 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
VAC14-211ENST00000568886 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
VAC14-211ENST00000568886 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
VAC14-211ENST00000568886 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.68
VAC14-211ENST00000568886 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
VAC14-211ENST00000568886 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
VAC14-211ENST00000568886 GRIN2BQ13224 1484 aa25.46■■□□□ 1.67
VAC14-211ENST00000568886 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
VAC14-211ENST00000568886 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
VAC14-211ENST00000568886 EEA1Q15075 1411 aa25.39■■□□□ 1.65
VAC14-211ENST00000568886 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
VAC14-211ENST00000568886 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.64
VAC14-211ENST00000568886 IGF1RP08069 1367 aa25.33■■□□□ 1.64
VAC14-211ENST00000568886 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
VAC14-211ENST00000568886 CUL7Q14999 1698 aa25.28■■□□□ 1.64
VAC14-211ENST00000568886 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
VAC14-211ENST00000568886 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
VAC14-211ENST00000568886 SYNJ2O15056 1496 aa25.24■■□□□ 1.63
VAC14-211ENST00000568886 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
VAC14-211ENST00000568886 CARMIL1Q5VZK9 1371 aa25.18■■□□□ 1.62
VAC14-211ENST00000568886 PRXQ9BXM0 1461 aa25.15■■□□□ 1.62
VAC14-211ENST00000568886 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
VAC14-211ENST00000568886 CHD1O14646 1710 aa25.13■■□□□ 1.61
VAC14-211ENST00000568886 CHMP7Q8WUX9 453 aaPredicted RBP25.12■■□□□ 1.61
VAC14-211ENST00000568886 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
VAC14-211ENST00000568886 FAM9AQ8IZU1 332 aaPredicted RBP25.06■■□□□ 1.6
VAC14-211ENST00000568886 KIF21BO75037 1637 aa25.05■■□□□ 1.6
VAC14-211ENST00000568886 FBLN2P98095 1184 aa25.05■■□□□ 1.6
VAC14-211ENST00000568886 NUP160Q12769 1436 aa25.03■■□□□ 1.6
VAC14-211ENST00000568886 OSCARQ8IYS5 282 aa25■■□□□ 1.59
VAC14-211ENST00000568886 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
VAC14-211ENST00000568886 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
VAC14-211ENST00000568886 GOLGA3Q08378 1498 aa24.92■■□□□ 1.58
VAC14-211ENST00000568886 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms