RNA–Protein interactions for RNA: ENST00000568841.5

SNAP23-220, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-220ENST00000568841 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
SNAP23-220ENST00000568841 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
SNAP23-220ENST00000568841 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
SNAP23-220ENST00000568841 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.31
SNAP23-220ENST00000568841 POTEB3A0JP26 581 aa13.07□□□□□ -0.32
SNAP23-220ENST00000568841 FAM69CQ0P6D2 419 aa13.07□□□□□ -0.32
SNAP23-220ENST00000568841 POTEBQ6S5H4 581 aa13.07□□□□□ -0.32
SNAP23-220ENST00000568841 UHRF1BP1LA0JNW5 1464 aa13.06□□□□□ -0.32
SNAP23-220ENST00000568841 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
SNAP23-220ENST00000568841 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
SNAP23-220ENST00000568841 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
SNAP23-220ENST00000568841 EMP3P54852 163 aa13.02□□□□□ -0.33
SNAP23-220ENST00000568841 UACAQ9BZF9 1416 aa13.02□□□□□ -0.33
SNAP23-220ENST00000568841 KDM5BQ9UGL1 1544 aa13.01□□□□□ -0.33
SNAP23-220ENST00000568841 KIAA0556O60303 1618 aa13□□□□□ -0.33
SNAP23-220ENST00000568841 HOXB1P14653 301 aaPredicted RBP13□□□□□ -0.33
SNAP23-220ENST00000568841 ASXL2Q76L83 1435 aa12.99□□□□□ -0.33
SNAP23-220ENST00000568841 GLI2P10070 1586 aa12.98□□□□□ -0.33
SNAP23-220ENST00000568841 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
SNAP23-220ENST00000568841 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
SNAP23-220ENST00000568841 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
SNAP23-220ENST00000568841 KIF3CO14782 793 aa12.97□□□□□ -0.33
SNAP23-220ENST00000568841 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
SNAP23-220ENST00000568841 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
SNAP23-220ENST00000568841 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
SNAP23-220ENST00000568841 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
SNAP23-220ENST00000568841 PPP1R37O75864 691 aa12.94□□□□□ -0.34
SNAP23-220ENST00000568841 HS6ST3Q8IZP7 471 aa12.94□□□□□ -0.34
SNAP23-220ENST00000568841 KRTAP3-3Q9BYR6 98 aa12.94□□□□□ -0.34
SNAP23-220ENST00000568841 KRTAP3-2Q9BYR7 98 aa12.94□□□□□ -0.34
SNAP23-220ENST00000568841 EPRSP07814 1512 aaKnown RBP12.93□□□□□ -0.34
SNAP23-220ENST00000568841 ABCA8O94911 1581 aa12.93□□□□□ -0.34
SNAP23-220ENST00000568841 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
SNAP23-220ENST00000568841 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
SNAP23-220ENST00000568841 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
SNAP23-220ENST00000568841 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
SNAP23-220ENST00000568841 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
SNAP23-220ENST00000568841 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
SNAP23-220ENST00000568841 KDM6BO15054 1643 aa12.9□□□□□ -0.34
SNAP23-220ENST00000568841 MAP3K4Q9Y6R4 1608 aa12.9□□□□□ -0.34
SNAP23-220ENST00000568841 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
SNAP23-220ENST00000568841 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
SNAP23-220ENST00000568841 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
SNAP23-220ENST00000568841 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
SNAP23-220ENST00000568841 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
SNAP23-220ENST00000568841 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
SNAP23-220ENST00000568841 SAMD9Q5K651 1589 aa12.85□□□□□ -0.35
SNAP23-220ENST00000568841 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
SNAP23-220ENST00000568841 EEA1Q15075 1411 aa12.82□□□□□ -0.36
SNAP23-220ENST00000568841 MMRN1Q13201 1228 aa12.82□□□□□ -0.36
SNAP23-220ENST00000568841 ATP10BO94823 1461 aa12.82□□□□□ -0.36
SNAP23-220ENST00000568841 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
SNAP23-220ENST00000568841 MAGI3Q5TCQ9 1506 aa12.81□□□□□ -0.36
SNAP23-220ENST00000568841 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
SNAP23-220ENST00000568841 ERBB3P21860 1342 aa12.8□□□□□ -0.36
SNAP23-220ENST00000568841 KHSRPQ92945 711 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■□□□□ 9.1
SNAP23-220ENST00000568841 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
SNAP23-220ENST00000568841 VARS2Q5ST30 1063 aaKnown RBP12.78□□□□□ -0.36
SNAP23-220ENST00000568841 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
SNAP23-220ENST00000568841 CD109Q6YHK3 1445 aa12.77□□□□□ -0.37
SNAP23-220ENST00000568841 CFAP43Q8NDM7 1665 aa12.77□□□□□ -0.37
SNAP23-220ENST00000568841 KIF21BO75037 1637 aa12.74□□□□□ -0.37
SNAP23-220ENST00000568841 NUP153P49790 1475 aaKnown RBP12.74□□□□□ -0.37
SNAP23-220ENST00000568841 SLC34A2O95436 690 aa12.74□□□□□ -0.37
SNAP23-220ENST00000568841 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
SNAP23-220ENST00000568841 RAPGEF6Q8TEU7 1601 aa12.73□□□□□ -0.37
SNAP23-220ENST00000568841 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
SNAP23-220ENST00000568841 ABCA9Q8IUA7 1624 aa12.72□□□□□ -0.37
SNAP23-220ENST00000568841 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.37
SNAP23-220ENST00000568841 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
SNAP23-220ENST00000568841 ARAP3Q8WWN8 1544 aa12.71□□□□□ -0.38
SNAP23-220ENST00000568841 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
SNAP23-220ENST00000568841 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
SNAP23-220ENST00000568841 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
SNAP23-220ENST00000568841 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
SNAP23-220ENST00000568841 PCDHGA4Q9Y5G9 962 aa12.68□□□□□ -0.38
SNAP23-220ENST00000568841 FOXK1P85037 733 aa12.67□□□□□ -0.38
SNAP23-220ENST00000568841 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
SNAP23-220ENST00000568841 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
SNAP23-220ENST00000568841 NUDT7P0C024 238 aa12.65□□□□□ -0.38
SNAP23-220ENST00000568841 PHLDB1Q86UU1 1377 aa12.65□□□□□ -0.38
SNAP23-220ENST00000568841 NEO1Q92859 1461 aa12.64□□□□□ -0.39
SNAP23-220ENST00000568841 FRMPD1Q5SYB0 1578 aa12.62□□□□□ -0.39
SNAP23-220ENST00000568841 ARHGAP35Q9NRY4 1499 aa12.62□□□□□ -0.39
SNAP23-220ENST00000568841 DSG2Q14126 1118 aa12.62□□□□□ -0.39
SNAP23-220ENST00000568841 GTPBP6O43824 516 aaPredicted RBP12.61□□□□□ -0.39
SNAP23-220ENST00000568841 RANGAP1P46060 587 aaPredicted RBP12.61□□□□□ -0.39
SNAP23-220ENST00000568841 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
SNAP23-220ENST00000568841 PTCD2Q8WV60 388 aaKnown RBP12.61□□□□□ -0.39
SNAP23-220ENST00000568841 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
SNAP23-220ENST00000568841 RAPGEF3O95398 923 aa12.6□□□□□ -0.39
SNAP23-220ENST00000568841 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
SNAP23-220ENST00000568841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNAP23-220ENST00000568841 CRISPLD2Q9H0B8 497 aa12.59□□□□□ -0.39
SNAP23-220ENST00000568841 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
SNAP23-220ENST00000568841 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
SNAP23-220ENST00000568841 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
SNAP23-220ENST00000568841 TTC37Q6PGP7 1564 aa12.56□□□□□ -0.4
SNAP23-220ENST00000568841 AKNAQ7Z591 1439 aa12.55□□□□□ -0.4
SNAP23-220ENST00000568841 RICTORQ6R327 1708 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms