RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 RAB3GAP2Q9H2M9 1393 aa23.47■■□□□ 1.35
SPG7-218ENST00000568205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.352e-8■□□□□ 11
SPG7-218ENST00000568205 MROH1Q8NDA8 1641 aa23.45■■□□□ 1.34
SPG7-218ENST00000568205 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
SPG7-218ENST00000568205 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
SPG7-218ENST00000568205 PRDM15P57071 1507 aaPredicted RBP23.44■■□□□ 1.34
SPG7-218ENST00000568205 UNC13BO14795 1591 aa23.43■■□□□ 1.34
SPG7-218ENST00000568205 KANK1Q14678 1352 aa23.42■■□□□ 1.34
SPG7-218ENST00000568205 HRCP23327 699 aa23.41■■□□□ 1.34
SPG7-218ENST00000568205 NUP155O75694 1391 aa23.4■■□□□ 1.34
SPG7-218ENST00000568205 FAM135AQ9P2D6 1515 aa23.4■■□□□ 1.34
SPG7-218ENST00000568205 ESF1Q9H501 851 aaKnown RBP23.4■■□□□ 1.34
SPG7-218ENST00000568205 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
SPG7-218ENST00000568205 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
SPG7-218ENST00000568205 WASHC2CQ9Y4E1 1318 aa23.39■■□□□ 1.34
SPG7-218ENST00000568205 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
SPG7-218ENST00000568205 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
SPG7-218ENST00000568205 ADAMTSL3P82987 1691 aa23.38■■□□□ 1.33
SPG7-218ENST00000568205 ABCC3O15438 1527 aa23.38■■□□□ 1.33
SPG7-218ENST00000568205 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
SPG7-218ENST00000568205 MADDQ8WXG6 1647 aa23.36■■□□□ 1.33
SPG7-218ENST00000568205 LMTK2Q8IWU2 1503 aa23.34■■□□□ 1.33
SPG7-218ENST00000568205 KDM4FA0A1W2PPD8 638 aa23.33■■□□□ 1.33
SPG7-218ENST00000568205 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
SPG7-218ENST00000568205 ZC3H13Q5T200 1668 aaKnown RBP23.32■■□□□ 1.32
SPG7-218ENST00000568205 PZPP20742 1482 aa23.31■■□□□ 1.32
SPG7-218ENST00000568205 FER1L4A9Z1Z3 1794 aa23.31■■□□□ 1.32
SPG7-218ENST00000568205 CLTCQ00610 1675 aaKnown RBP23.29■■□□□ 1.32
SPG7-218ENST00000568205 ZMYM3Q14202 1370 aa23.28■■□□□ 1.32
SPG7-218ENST00000568205 SLC4A1APQ9BWU0 796 aaKnown RBP23.28■■□□□ 1.32
SPG7-218ENST00000568205 RIMS1Q86UR5 1692 aaKnown RBP23.28■■□□□ 1.32
SPG7-218ENST00000568205 CEP152O94986 1710 aa23.28■■□□□ 1.32
SPG7-218ENST00000568205 EFCAB6Q5THR3 1501 aa23.26■■□□□ 1.31
SPG7-218ENST00000568205 TET3O43151 1660 aa23.25■■□□□ 1.31
SPG7-218ENST00000568205 ARHGAP31Q2M1Z3 1444 aa23.25■■□□□ 1.31
SPG7-218ENST00000568205 PTPRMP28827 1452 aa23.25■■□□□ 1.31
SPG7-218ENST00000568205 MPHOSPH9Q99550 1183 aa23.25■■□□□ 1.31
SPG7-218ENST00000568205 CAMSAP1Q5T5Y3 1602 aa23.25■■□□□ 1.31
SPG7-218ENST00000568205 MROH2AA6NES4 1674 aa23.25■■□□□ 1.31
SPG7-218ENST00000568205 NPATQ14207 1427 aa23.24■■□□□ 1.31
SPG7-218ENST00000568205 CEBPAP49715 358 aaPredicted RBP23.22■■□□□ 1.31
SPG7-218ENST00000568205 PKD2Q13563 968 aa23.22■■□□□ 1.31
SPG7-218ENST00000568205 RPRD2Q5VT52 1461 aaKnown RBP23.2■■□□□ 1.3
SPG7-218ENST00000568205 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
SPG7-218ENST00000568205 FBXO31Q5XUX0 539 aaPredicted RBP23.18■■□□□ 1.3
SPG7-218ENST00000568205 C3P01024 1663 aa23.17■■□□□ 1.3
SPG7-218ENST00000568205 ERVK-7P63135 1459 aa23.17■■□□□ 1.3
SPG7-218ENST00000568205 E9PCH4 1651 aa23.16■■□□□ 1.3
SPG7-218ENST00000568205 FOXD1Q16676 465 aa23.14■■□□□ 1.29
SPG7-218ENST00000568205 NOS1P29475 1434 aa23.14■■□□□ 1.29
SPG7-218ENST00000568205 DHX57Q6P158 1386 aaKnown RBP23.14■■□□□ 1.29
SPG7-218ENST00000568205 SPATA31D1Q6ZQQ2 1576 aa23.13■■□□□ 1.29
SPG7-218ENST00000568205 TNRQ92752 1358 aa23.12■■□□□ 1.29
SPG7-218ENST00000568205 PTPRTO14522 1441 aa23.11■■□□□ 1.29
SPG7-218ENST00000568205 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
SPG7-218ENST00000568205 PLA2R1Q13018 1463 aa23.08■■□□□ 1.29
SPG7-218ENST00000568205 SYNMO15061 1565 aa23.06■■□□□ 1.28
SPG7-218ENST00000568205 TRPM2O94759 1503 aa23.05■■□□□ 1.28
SPG7-218ENST00000568205 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
SPG7-218ENST00000568205 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
SPG7-218ENST00000568205 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
SPG7-218ENST00000568205 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
SPG7-218ENST00000568205 IDI1Q13907 227 aa23■■□□□ 1.27
SPG7-218ENST00000568205 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
SPG7-218ENST00000568205 CFAP65Q6ZU64 1925 aaKnown RBP22.99■■□□□ 1.27
SPG7-218ENST00000568205 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
SPG7-218ENST00000568205 UHRF1BP1Q6BDS2 1440 aa22.99■■□□□ 1.27
SPG7-218ENST00000568205 MYO3AQ8NEV4 1616 aa22.98■■□□□ 1.27
SPG7-218ENST00000568205 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
SPG7-218ENST00000568205 A2ML1A8K2U0 1454 aa22.96■■□□□ 1.27
SPG7-218ENST00000568205 CLTCL1P53675 1640 aa22.96■■□□□ 1.27
SPG7-218ENST00000568205 SETD1BQ9UPS6 1966 aaKnown RBP22.94■■□□□ 1.26
SPG7-218ENST00000568205 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
SPG7-218ENST00000568205 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
SPG7-218ENST00000568205 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
SPG7-218ENST00000568205 CHGAP10645 457 aaKnown RBP22.91■■□□□ 1.26
SPG7-218ENST00000568205 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
SPG7-218ENST00000568205 ADGRB3O60242 1522 aa22.91■■□□□ 1.26
SPG7-218ENST00000568205 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
SPG7-218ENST00000568205 CLSPNQ9HAW4 1339 aa22.89■■□□□ 1.26
SPG7-218ENST00000568205 LMTK3Q96Q04 1460 aa22.89■■□□□ 1.25
SPG7-218ENST00000568205 SIN3AQ96ST3 1273 aa22.87■■□□□ 1.25
SPG7-218ENST00000568205 SPATA31E1Q6ZUB1 1445 aa22.86■■□□□ 1.25
SPG7-218ENST00000568205 THEMISQ8N1K5 641 aaPredicted RBP22.86■■□□□ 1.25
SPG7-218ENST00000568205 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
SPG7-218ENST00000568205 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
SPG7-218ENST00000568205 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
SPG7-218ENST00000568205 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
SPG7-218ENST00000568205 NEURL4Q96JN8 1562 aa22.81■■□□□ 1.24
SPG7-218ENST00000568205 TMEM2Q9UHN6 1383 aa22.81■■□□□ 1.24
SPG7-218ENST00000568205 HSPA2P54652 639 aa22.81■■□□□ 1.24
SPG7-218ENST00000568205 ZNF326Q5BKZ1 582 aaKnown RBP22.81■■□□□ 1.24
SPG7-218ENST00000568205 RGL3Q3MIN7 710 aa22.8■■□□□ 1.24
SPG7-218ENST00000568205 KIF1BO60333 1816 aa22.8■■□□□ 1.24
SPG7-218ENST00000568205 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
SPG7-218ENST00000568205 SLIT1O75093 1534 aa22.78■■□□□ 1.24
SPG7-218ENST00000568205 RIMS2Q9UQ26 1411 aa22.77■■□□□ 1.24
SPG7-218ENST00000568205 RPGRIP1LQ68CZ1 1315 aa22.77■■□□□ 1.24
SPG7-218ENST00000568205 ZFYVE9O95405 1425 aa22.76■■□□□ 1.23
SPG7-218ENST00000568205 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms