RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 MROH2AA6NES4 1674 aa19.03■□□□□ 0.64
RNF40-211ENST00000567365 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
RNF40-211ENST00000567365 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
RNF40-211ENST00000567365 KIF3BO15066 747 aa19.02■□□□□ 0.64
RNF40-211ENST00000567365 RRP7BPQ9NSQ0 103 aa19.02■□□□□ 0.64
RNF40-211ENST00000567365 DEPDC5O75140 1603 aa19.01■□□□□ 0.63
RNF40-211ENST00000567365 C3P01024 1663 aa19.01■□□□□ 0.63
RNF40-211ENST00000567365 LMTK3Q96Q04 1460 aa19■□□□□ 0.63
RNF40-211ENST00000567365 CLTCQ00610 1675 aaKnown RBP18.99■□□□□ 0.63
RNF40-211ENST00000567365 KDM5DQ9BY66 1539 aa18.99■□□□□ 0.63
RNF40-211ENST00000567365 GGT6Q6P531 493 aa18.98■□□□□ 0.63
RNF40-211ENST00000567365 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
RNF40-211ENST00000567365 HSPA2P54652 639 aa18.96■□□□□ 0.63
RNF40-211ENST00000567365 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
RNF40-211ENST00000567365 ANKRD50Q9ULJ7 1429 aa18.95■□□□□ 0.62
RNF40-211ENST00000567365 ABCC3O15438 1527 aa18.95■□□□□ 0.62
RNF40-211ENST00000567365 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
RNF40-211ENST00000567365 VWDEQ8N2E2 1590 aa18.94■□□□□ 0.62
RNF40-211ENST00000567365 CEBPAP49715 358 aaPredicted RBP18.94■□□□□ 0.62
RNF40-211ENST00000567365 ZC3H13Q5T200 1668 aaKnown RBP18.94■□□□□ 0.62
RNF40-211ENST00000567365 ITGAEP38570 1179 aa18.92■□□□□ 0.62
RNF40-211ENST00000567365 SETD1BQ9UPS6 1966 aaKnown RBP18.91■□□□□ 0.62
RNF40-211ENST00000567365 NPATQ14207 1427 aa18.91■□□□□ 0.62
RNF40-211ENST00000567365 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
RNF40-211ENST00000567365 UNC13BO14795 1591 aa18.89■□□□□ 0.62
RNF40-211ENST00000567365 CEP152O94986 1710 aa18.89■□□□□ 0.61
RNF40-211ENST00000567365 NAIPQ13075 1403 aa18.89■□□□□ 0.61
RNF40-211ENST00000567365 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
RNF40-211ENST00000567365 WASHC2CQ9Y4E1 1318 aa18.88■□□□□ 0.61
RNF40-211ENST00000567365 PZPP20742 1482 aa18.88■□□□□ 0.61
RNF40-211ENST00000567365 GCC2Q8IWJ2 1684 aa18.88■□□□□ 0.61
RNF40-211ENST00000567365 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
RNF40-211ENST00000567365 PREX1Q8TCU6 1659 aa18.87■□□□□ 0.61
RNF40-211ENST00000567365 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
RNF40-211ENST00000567365 ARHGAP31Q2M1Z3 1444 aa18.85■□□□□ 0.61
RNF40-211ENST00000567365 SPATA31D1Q6ZQQ2 1576 aa18.82■□□□□ 0.6
RNF40-211ENST00000567365 IQGAP3Q86VI3 1631 aa18.81■□□□□ 0.6
RNF40-211ENST00000567365 KANK1Q14678 1352 aa18.81■□□□□ 0.6
RNF40-211ENST00000567365 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
RNF40-211ENST00000567365 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
RNF40-211ENST00000567365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.62e-10■■□□□ 13
RNF40-211ENST00000567365 MYO3AQ8NEV4 1616 aa18.79■□□□□ 0.6
RNF40-211ENST00000567365 UHRF1BP1Q6BDS2 1440 aa18.79■□□□□ 0.6
RNF40-211ENST00000567365 TET3O43151 1660 aa18.79■□□□□ 0.6
RNF40-211ENST00000567365 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
RNF40-211ENST00000567365 ZNF142P52746 1687 aaPredicted RBP18.78■□□□□ 0.6
RNF40-211ENST00000567365 CERKQ8TCT0 537 aa18.77■□□□□ 0.6
RNF40-211ENST00000567365 TNRQ92752 1358 aa18.75■□□□□ 0.59
RNF40-211ENST00000567365 CEP170BQ9Y4F5 1589 aaPredicted RBP18.75■□□□□ 0.59
RNF40-211ENST00000567365 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
RNF40-211ENST00000567365 NOS1P29475 1434 aa18.74■□□□□ 0.59
RNF40-211ENST00000567365 NUP155O75694 1391 aa18.73■□□□□ 0.59
RNF40-211ENST00000567365 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
RNF40-211ENST00000567365 E9PCH4 1651 aa18.73■□□□□ 0.59
RNF40-211ENST00000567365 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
RNF40-211ENST00000567365 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
RNF40-211ENST00000567365 SYNMO15061 1565 aa18.71■□□□□ 0.59
RNF40-211ENST00000567365 SETD5Q9C0A6 1442 aa18.68■□□□□ 0.58
RNF40-211ENST00000567365 STRCQ7RTU9 1775 aa18.68■□□□□ 0.58
RNF40-211ENST00000567365 PLA2R1Q13018 1463 aa18.65■□□□□ 0.58
RNF40-211ENST00000567365 PIK3C2BO00750 1634 aa18.64■□□□□ 0.57
RNF40-211ENST00000567365 UBR1Q8IWV7 1749 aa18.64■□□□□ 0.57
RNF40-211ENST00000567365 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
RNF40-211ENST00000567365 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
RNF40-211ENST00000567365 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
RNF40-211ENST00000567365 PTPRTO14522 1441 aa18.62■□□□□ 0.57
RNF40-211ENST00000567365 IDI1Q13907 227 aa18.6■□□□□ 0.57
RNF40-211ENST00000567365 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
RNF40-211ENST00000567365 SLC52A1Q9NWF4 448 aa18.59■□□□□ 0.57
RNF40-211ENST00000567365 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.57
RNF40-211ENST00000567365 HRCP23327 699 aa18.58■□□□□ 0.56
RNF40-211ENST00000567365 ARHGAP23Q9P227 1491 aa18.58■□□□□ 0.56
RNF40-211ENST00000567365 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
RNF40-211ENST00000567365 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
RNF40-211ENST00000567365 SLIT1O75093 1534 aa18.56■□□□□ 0.56
RNF40-211ENST00000567365 THEMISQ8N1K5 641 aaPredicted RBP18.56■□□□□ 0.56
RNF40-211ENST00000567365 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
RNF40-211ENST00000567365 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
RNF40-211ENST00000567365 TRPM2O94759 1503 aa18.55■□□□□ 0.56
RNF40-211ENST00000567365 TMEM131LA2VDJ0 1609 aa18.55■□□□□ 0.56
RNF40-211ENST00000567365 PKD2Q13563 968 aa18.54■□□□□ 0.56
RNF40-211ENST00000567365 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
RNF40-211ENST00000567365 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
RNF40-211ENST00000567365 MED14O60244 1454 aa18.52■□□□□ 0.56
RNF40-211ENST00000567365 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.56
RNF40-211ENST00000567365 ILDR2Q71H61 639 aa18.52■□□□□ 0.56
RNF40-211ENST00000567365 MPHOSPH9Q99550 1183 aa18.52■□□□□ 0.56
RNF40-211ENST00000567365 CLTCL1P53675 1640 aa18.51■□□□□ 0.55
RNF40-211ENST00000567365 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
RNF40-211ENST00000567365 NCKAP5LQ9HCH0 1330 aa18.5■□□□□ 0.55
RNF40-211ENST00000567365 ZFYVE9O95405 1425 aa18.48■□□□□ 0.55
RNF40-211ENST00000567365 LTKP29376 864 aa18.47■□□□□ 0.55
RNF40-211ENST00000567365 TRIM26Q12899 539 aaPredicted RBP18.47■□□□□ 0.55
RNF40-211ENST00000567365 ANKLE2Q86XL3 938 aa18.47■□□□□ 0.55
RNF40-211ENST00000567365 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
RNF40-211ENST00000567365 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
RNF40-211ENST00000567365 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
RNF40-211ENST00000567365 FOXD1Q16676 465 aa18.45■□□□□ 0.54
RNF40-211ENST00000567365 IQGAP1P46940 1657 aa18.44■□□□□ 0.54
RNF40-211ENST00000567365 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms