RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 UPF2Q9HAU5 1272 aaKnown RBP15.11■□□□□ 0.01
CDH1-210ENST00000566612 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
CDH1-210ENST00000566612 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
CDH1-210ENST00000566612 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
CDH1-210ENST00000566612 CAMSAP2Q08AD1 1489 aa15.08■□□□□ 0
CDH1-210ENST00000566612 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
CDH1-210ENST00000566612 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
CDH1-210ENST00000566612 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
CDH1-210ENST00000566612 GOLGA2Q08379 1002 aa15.06■□□□□ 0
CDH1-210ENST00000566612 AKNAQ7Z591 1439 aa15.06■□□□□ 0
CDH1-210ENST00000566612 PDE3BQ13370 1112 aa15.06■□□□□ 0
CDH1-210ENST00000566612 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
CDH1-210ENST00000566612 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
CDH1-210ENST00000566612 PLEKHG5O94827 1062 aa15.05■□□□□ 0
CDH1-210ENST00000566612 RRP1P56182 461 aaKnown RBP15.05■□□□□ 0
CDH1-210ENST00000566612 MAPK8IP3Q9UPT6 1336 aa15.05■□□□□ -0
CDH1-210ENST00000566612 FTSJ3Q8IY81 847 aaKnown RBP15.05■□□□□ -0
CDH1-210ENST00000566612 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
CDH1-210ENST00000566612 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
CDH1-210ENST00000566612 RRP7AQ9Y3A4 280 aaKnown RBP15.04■□□□□ -0
CDH1-210ENST00000566612 CTTNBP2Q8WZ74 1663 aa15.03■□□□□ -0
CDH1-210ENST00000566612 MAGI1Q96QZ7 1491 aaPredicted RBP15.03■□□□□ -0
CDH1-210ENST00000566612 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
CDH1-210ENST00000566612 RPRD2Q5VT52 1461 aaKnown RBP15.02■□□□□ -0
CDH1-210ENST00000566612 NUP153P49790 1475 aaKnown RBP15.02■□□□□ -0
CDH1-210ENST00000566612 CFAP70Q5T0N1 1121 aa15.02□□□□□ -0.01
CDH1-210ENST00000566612 EIF3AQ14152 1382 aaKnown RBP15.02□□□□□ -0.01
CDH1-210ENST00000566612 APAF1O14727 1248 aa15.02□□□□□ -0.01
CDH1-210ENST00000566612 ARXQ96QS3 562 aa15.01□□□□□ -0.01
CDH1-210ENST00000566612 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
CDH1-210ENST00000566612 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
CDH1-210ENST00000566612 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
CDH1-210ENST00000566612 CRBNQ96SW2 442 aa15□□□□□ -0.01
CDH1-210ENST00000566612 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
CDH1-210ENST00000566612 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
CDH1-210ENST00000566612 TMEM132EQ6IEE7 984 aa14.98□□□□□ -0.01
CDH1-210ENST00000566612 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
CDH1-210ENST00000566612 SOX12O15370 315 aa14.98□□□□□ -0.01
CDH1-210ENST00000566612 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
CDH1-210ENST00000566612 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
CDH1-210ENST00000566612 CYB5RLQ6IPT4 315 aa14.96□□□□□ -0.02
CDH1-210ENST00000566612 BCL2L13Q9BXK5 485 aa14.95□□□□□ -0.02
CDH1-210ENST00000566612 C14orf37Q86TY3 774 aa14.95□□□□□ -0.02
CDH1-210ENST00000566612 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
CDH1-210ENST00000566612 IPO9Q96P70 1041 aaKnown RBP14.94□□□□□ -0.02
CDH1-210ENST00000566612 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
CDH1-210ENST00000566612 SCAPERQ9BY12 1400 aa14.93□□□□□ -0.02
CDH1-210ENST00000566612 ZBTB7CA1YPR0 619 aa14.93□□□□□ -0.02
CDH1-210ENST00000566612 ATP10BO94823 1461 aa14.93□□□□□ -0.02
CDH1-210ENST00000566612 PDE4AP27815 886 aa14.92□□□□□ -0.02
CDH1-210ENST00000566612 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
CDH1-210ENST00000566612 CCDC141Q6ZP82 1450 aa14.92□□□□□ -0.02
CDH1-210ENST00000566612 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
CDH1-210ENST00000566612 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
CDH1-210ENST00000566612 WDR62O43379 1518 aa14.91□□□□□ -0.02
CDH1-210ENST00000566612 RAPGEF6Q8TEU7 1601 aa14.91□□□□□ -0.02
CDH1-210ENST00000566612 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
CDH1-210ENST00000566612 DEKP35659 375 aaKnown RBP14.91□□□□□ -0.02
CDH1-210ENST00000566612 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
CDH1-210ENST00000566612 HDGFL2Q7Z4V5 671 aaPredicted RBP14.9□□□□□ -0.02
CDH1-210ENST00000566612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.9□□□□□ -0.02
CDH1-210ENST00000566612 MINK1Q8N4C8 1332 aaPredicted RBP14.9□□□□□ -0.02
CDH1-210ENST00000566612 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
CDH1-210ENST00000566612 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
CDH1-210ENST00000566612 BECN1Q14457 450 aa14.89□□□□□ -0.03
CDH1-210ENST00000566612 MYH16Q9H6N6 1097 aa14.89□□□□□ -0.03
CDH1-210ENST00000566612 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
CDH1-210ENST00000566612 PLEKHH2Q8IVE3 1493 aa14.88□□□□□ -0.03
CDH1-210ENST00000566612 NUTM2FA1L443 756 aa14.88□□□□□ -0.03
CDH1-210ENST00000566612 COG6Q9Y2V7 657 aa14.88□□□□□ -0.03
CDH1-210ENST00000566612 SAMD9Q5K651 1589 aa14.87□□□□□ -0.03
CDH1-210ENST00000566612 KIF14Q15058 1648 aa14.87□□□□□ -0.03
CDH1-210ENST00000566612 SLC4A3P48751 1232 aa14.87□□□□□ -0.03
CDH1-210ENST00000566612 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
CDH1-210ENST00000566612 KIAA0556O60303 1618 aa14.87□□□□□ -0.03
CDH1-210ENST00000566612 ERBINQ96RT1 1412 aa14.86□□□□□ -0.03
CDH1-210ENST00000566612 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
CDH1-210ENST00000566612 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
CDH1-210ENST00000566612 E9PSI1 815 aa14.85□□□□□ -0.03
CDH1-210ENST00000566612 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
CDH1-210ENST00000566612 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
CDH1-210ENST00000566612 CGNL1Q0VF96 1302 aa14.85□□□□□ -0.03
CDH1-210ENST00000566612 SPRYD3Q8NCJ5 442 aa14.85□□□□□ -0.03
CDH1-210ENST00000566612 SMC4Q9NTJ3 1288 aa14.85□□□□□ -0.03
CDH1-210ENST00000566612 EVC2Q86UK5 1308 aa14.84□□□□□ -0.03
CDH1-210ENST00000566612 STAC3Q96MF2 364 aa14.84□□□□□ -0.03
CDH1-210ENST00000566612 ITPRIPQ8IWB1 547 aa14.84□□□□□ -0.03
CDH1-210ENST00000566612 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
CDH1-210ENST00000566612 GGNBP2Q9H3C7 697 aa14.82□□□□□ -0.04
CDH1-210ENST00000566612 MTHFSP49914 203 aa14.82□□□□□ -0.04
CDH1-210ENST00000566612 MS4A1P11836 297 aa14.81□□□□□ -0.04
CDH1-210ENST00000566612 CENPQQ7L2Z9 268 aaPredicted RBP14.81□□□□□ -0.04
CDH1-210ENST00000566612 ELL2O00472 640 aaPredicted RBP14.81□□□□□ -0.04
CDH1-210ENST00000566612 RTN4Q9NQC3 1192 aaKnown RBP14.81□□□□□ -0.04
CDH1-210ENST00000566612 PZPP20742 1482 aa14.8□□□□□ -0.04
CDH1-210ENST00000566612 TARBP1Q13395 1621 aaKnown RBP14.8□□□□□ -0.04
CDH1-210ENST00000566612 SKAP1Q86WV1 359 aa14.8□□□□□ -0.04
CDH1-210ENST00000566612 RWDD1Q9H446 243 aaPredicted RBP14.79□□□□□ -0.04
CDH1-210ENST00000566612 DISP3Q9P2K9 1392 aa14.79□□□□□ -0.04
CDH1-210ENST00000566612 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms