RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.32
SCAMP2-207ENST00000566480 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
SCAMP2-207ENST00000566480 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
SCAMP2-207ENST00000566480 CCDC184Q52MB2 194 aa17.01■□□□□ 0.31
SCAMP2-207ENST00000566480 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
SCAMP2-207ENST00000566480 COL17A1Q9UMD9 1497 aaPredicted RBP17■□□□□ 0.31
SCAMP2-207ENST00000566480 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
SCAMP2-207ENST00000566480 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 RGL3Q3MIN7 710 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 USP47Q96K76 1375 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 PLCH2O75038 1416 aa16.99■□□□□ 0.31
SCAMP2-207ENST00000566480 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
SCAMP2-207ENST00000566480 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
SCAMP2-207ENST00000566480 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
SCAMP2-207ENST00000566480 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
SCAMP2-207ENST00000566480 HNRNPUQ00839 825 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCAMP2-207ENST00000566480 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
SCAMP2-207ENST00000566480 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
SCAMP2-207ENST00000566480 BCANQ96GW7 911 aa16.92■□□□□ 0.3
SCAMP2-207ENST00000566480 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
SCAMP2-207ENST00000566480 ABCC1P33527 1531 aa16.9■□□□□ 0.3
SCAMP2-207ENST00000566480 PLA2R1Q13018 1463 aa16.9■□□□□ 0.3
SCAMP2-207ENST00000566480 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
SCAMP2-207ENST00000566480 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
SCAMP2-207ENST00000566480 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
SCAMP2-207ENST00000566480 KDM5CP41229 1560 aa16.89■□□□□ 0.29
SCAMP2-207ENST00000566480 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
SCAMP2-207ENST00000566480 PLXNC1O60486 1568 aa16.89■□□□□ 0.29
SCAMP2-207ENST00000566480 SPAG9O60271 1321 aaKnown RBP16.89■□□□□ 0.29
SCAMP2-207ENST00000566480 FKBP8Q14318 412 aa16.89■□□□□ 0.29
SCAMP2-207ENST00000566480 UNC13BO14795 1591 aa16.89■□□□□ 0.29
SCAMP2-207ENST00000566480 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
SCAMP2-207ENST00000566480 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
SCAMP2-207ENST00000566480 FRMPD1Q5SYB0 1578 aa16.88■□□□□ 0.29
SCAMP2-207ENST00000566480 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
SCAMP2-207ENST00000566480 FANCAO15360 1455 aa16.87■□□□□ 0.29
SCAMP2-207ENST00000566480 POLR1AO95602 1720 aaPredicted RBP16.87■□□□□ 0.29
SCAMP2-207ENST00000566480 KCNA4P22459 653 aa16.87■□□□□ 0.29
SCAMP2-207ENST00000566480 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
SCAMP2-207ENST00000566480 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
SCAMP2-207ENST00000566480 RAPGEF3O95398 923 aa16.86■□□□□ 0.29
SCAMP2-207ENST00000566480 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
SCAMP2-207ENST00000566480 ERBINQ96RT1 1412 aa16.84■□□□□ 0.29
SCAMP2-207ENST00000566480 RICTORQ6R327 1708 aa16.83■□□□□ 0.28
SCAMP2-207ENST00000566480 A2MP01023 1474 aa16.81■□□□□ 0.28
SCAMP2-207ENST00000566480 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
SCAMP2-207ENST00000566480 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
SCAMP2-207ENST00000566480 SIGLEC1Q9BZZ2 1709 aa16.8■□□□□ 0.28
SCAMP2-207ENST00000566480 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
SCAMP2-207ENST00000566480 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
SCAMP2-207ENST00000566480 ZFYVE16Q7Z3T8 1539 aa16.8■□□□□ 0.28
SCAMP2-207ENST00000566480 ADGRL1O94910 1474 aa16.79■□□□□ 0.28
SCAMP2-207ENST00000566480 KIF3BO15066 747 aa16.78■□□□□ 0.28
SCAMP2-207ENST00000566480 MAGI2Q86UL8 1455 aa16.78■□□□□ 0.28
SCAMP2-207ENST00000566480 TRPM1Q7Z4N2 1603 aa16.76■□□□□ 0.27
SCAMP2-207ENST00000566480 NEFLP07196 543 aa16.76■□□□□ 0.27
SCAMP2-207ENST00000566480 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
SCAMP2-207ENST00000566480 NEO1Q92859 1461 aa16.75■□□□□ 0.27
SCAMP2-207ENST00000566480 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
SCAMP2-207ENST00000566480 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
SCAMP2-207ENST00000566480 RTEL1-TNFRSF6BF6WH68 1400 aa16.75■□□□□ 0.27
SCAMP2-207ENST00000566480 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
SCAMP2-207ENST00000566480 ATP7AQ04656 1500 aa16.74■□□□□ 0.27
SCAMP2-207ENST00000566480 E9PCH4 1651 aa16.74■□□□□ 0.27
SCAMP2-207ENST00000566480 ARID4BQ4LE39 1312 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-207ENST00000566480 YEATS2Q9ULM3 1422 aa16.73■□□□□ 0.27
SCAMP2-207ENST00000566480 ATP10AO60312 1499 aa16.71■□□□□ 0.27
SCAMP2-207ENST00000566480 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
SCAMP2-207ENST00000566480 INO80Q9ULG1 1556 aaPredicted RBP16.69■□□□□ 0.26
SCAMP2-207ENST00000566480 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
SCAMP2-207ENST00000566480 DISP3Q9P2K9 1392 aa16.68■□□□□ 0.26
SCAMP2-207ENST00000566480 TESK2Q96S53 571 aa16.67■□□□□ 0.26
SCAMP2-207ENST00000566480 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
SCAMP2-207ENST00000566480 GPRASP1Q5JY77 1395 aa16.67■□□□□ 0.26
SCAMP2-207ENST00000566480 KANK1Q14678 1352 aa16.66■□□□□ 0.26
SCAMP2-207ENST00000566480 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
SCAMP2-207ENST00000566480 DEPDC5O75140 1603 aa16.64■□□□□ 0.26
SCAMP2-207ENST00000566480 CLTCL1P53675 1640 aa16.64■□□□□ 0.26
SCAMP2-207ENST00000566480 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
SCAMP2-207ENST00000566480 SPHKAPQ2M3C7 1700 aa16.64■□□□□ 0.25
SCAMP2-207ENST00000566480 PRDM15P57071 1507 aaPredicted RBP16.64■□□□□ 0.25
SCAMP2-207ENST00000566480 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
SCAMP2-207ENST00000566480 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
SCAMP2-207ENST00000566480 TRPM2O94759 1503 aa16.63■□□□□ 0.25
SCAMP2-207ENST00000566480 ARHGEF40Q8TER5 1519 aa16.63■□□□□ 0.25
SCAMP2-207ENST00000566480 ZMYM4Q5VZL5 1548 aa16.63■□□□□ 0.25
SCAMP2-207ENST00000566480 GGT6Q6P531 493 aa16.62■□□□□ 0.25
SCAMP2-207ENST00000566480 PTPRTO14522 1441 aa16.62■□□□□ 0.25
SCAMP2-207ENST00000566480 TET3O43151 1660 aa16.61■□□□□ 0.25
SCAMP2-207ENST00000566480 DIP2CQ9Y2E4 1556 aa16.61■□□□□ 0.25
SCAMP2-207ENST00000566480 CC2D1BQ5T0F9 858 aaKnown RBP16.61■□□□□ 0.25
SCAMP2-207ENST00000566480 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
SCAMP2-207ENST00000566480 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
SCAMP2-207ENST00000566480 EIF2AK4Q9P2K8 1649 aaKnown RBP16.61■□□□□ 0.25
SCAMP2-207ENST00000566480 MROH1Q8NDA8 1641 aa16.6■□□□□ 0.25
SCAMP2-207ENST00000566480 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
SCAMP2-207ENST00000566480 PANK3Q9H999 370 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms