RNA–Protein interactions for RNA: ENST00000565154.5

PKM-215, Transcript of pyruvate kinase M1/2, human

APPRIS ALT1 TSL 2 BASIC

Gene PKM, Length 2,004 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-215	ENST00000565154	NEO1	Q92859	1461 aa		28.83	■■■□□ 2.21
PKM-215	ENST00000565154	CCDC144A	A2RUR9	1427 aa		28.83	■■■□□ 2.21
PKM-215	ENST00000565154	PLA2R1	Q13018	1463 aa		28.83	■■■□□ 2.21
PKM-215	ENST00000565154		E9PCH4	1651 aa		28.83	■■■□□ 2.21
PKM-215	ENST00000565154	UHRF1BP1	Q6BDS2	1440 aa		28.83	■■■□□ 2.21
PKM-215	ENST00000565154	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.82	■■■□□ 2.2
PKM-215	ENST00000565154	TET3	O43151	1660 aa		28.81	■■■□□ 2.2
PKM-215	ENST00000565154	VWDE	Q8N2E2	1590 aa		28.81	■■■□□ 2.2
PKM-215	ENST00000565154	HSPA5	P11021	654 aa	Known RBP	28.81	■■■□□ 2.2
PKM-215	ENST00000565154	DDX10	Q13206	875 aa	Known RBP	28.81	■■■□□ 2.2
PKM-215	ENST00000565154	POLR1A	O95602	1720 aa	Predicted RBP	28.81	■■■□□ 2.2
PKM-215	ENST00000565154	GLI2	P10070	1586 aa		28.81	■■■□□ 2.2
PKM-215	ENST00000565154	HECW2	Q9P2P5	1572 aa		28.81	■■■□□ 2.2
PKM-215	ENST00000565154	PRDM15	P57071	1507 aa	Predicted RBP	28.81	■■■□□ 2.2
PKM-215	ENST00000565154	CYB5RL	Q6IPT4	315 aa		28.79	■■■□□ 2.2
PKM-215	ENST00000565154	MROH1	Q8NDA8	1641 aa		28.78	■■■□□ 2.2
PKM-215	ENST00000565154	DHX29	Q7Z478	1369 aa	Known RBP	28.78	■■■□□ 2.2
PKM-215	ENST00000565154	SPHKAP	Q2M3C7	1700 aa		28.76	■■■□□ 2.19
PKM-215	ENST00000565154	RALGAPB	Q86X10	1494 aa		28.76	■■■□□ 2.19
PKM-215	ENST00000565154	MLH3	Q9UHC1	1453 aa		28.76	■■■□□ 2.19
PKM-215	ENST00000565154	SPATA31E1	Q6ZUB1	1445 aa		28.74	■■■□□ 2.19
PKM-215	ENST00000565154	RNF17	Q9BXT8	1623 aa	Known RBP	28.73	■■■□□ 2.19
PKM-215	ENST00000565154	CENPB	P07199	599 aa	Predicted RBP	28.73	■■■□□ 2.19
PKM-215	ENST00000565154	MYT1L	Q9UL68	1186 aa		28.73	■■■□□ 2.19
PKM-215	ENST00000565154	RICTOR	Q6R327	1708 aa		28.71	■■■□□ 2.19
PKM-215	ENST00000565154	TRPM2	O94759	1503 aa		28.71	■■■□□ 2.19
PKM-215	ENST00000565154	BCORL1	Q5H9F3	1711 aa		28.7	■■■□□ 2.19
PKM-215	ENST00000565154	ABCA6	Q8N139	1617 aa		28.7	■■■□□ 2.19
PKM-215	ENST00000565154	DIP2B	Q9P265	1576 aa		28.7	■■■□□ 2.19
PKM-215	ENST00000565154	A2M	P01023	1474 aa		28.7	■■■□□ 2.18
PKM-215	ENST00000565154	KANK1	Q14678	1352 aa		28.7	■■■□□ 2.18
PKM-215	ENST00000565154	CEP152	O94986	1710 aa		28.69	■■■□□ 2.18
PKM-215	ENST00000565154	FRMPD1	Q5SYB0	1578 aa		28.69	■■■□□ 2.18
PKM-215	ENST00000565154	TRPM1	Q7Z4N2	1603 aa		28.66	■■■□□ 2.18
PKM-215	ENST00000565154	WASHC2A	Q641Q2	1341 aa		28.66	■■■□□ 2.18
PKM-215	ENST00000565154	ZNF326	Q5BKZ1	582 aa	Known RBP	28.65	■■■□□ 2.18
PKM-215	ENST00000565154	YTHDC1	Q96MU7	727 aa	Known RBP	28.65	■■■□□ 2.18
PKM-215	ENST00000565154	KIF3B	O15066	747 aa		28.65	■■■□□ 2.18
PKM-215	ENST00000565154	PTPRT	O14522	1441 aa		28.64	■■■□□ 2.17
PKM-215	ENST00000565154	EFCAB6	Q5THR3	1501 aa		28.63	■■■□□ 2.17
PKM-215	ENST00000565154	DCAF11	Q8TEB1	546 aa		28.62	■■■□□ 2.17
PKM-215	ENST00000565154	USP47	Q96K76	1375 aa		28.61	■■■□□ 2.17
PKM-215	ENST00000565154	LMTK2	Q8IWU2	1503 aa		28.61	■■■□□ 2.17
PKM-215	ENST00000565154	CLTCL1	P53675	1640 aa		28.61	■■■□□ 2.17
PKM-215	ENST00000565154	PRAG1	Q86YV5	1406 aa		28.61	■■■□□ 2.17
PKM-215	ENST00000565154	PPRC1	Q5VV67	1664 aa	Known RBP	28.6	■■■□□ 2.17
PKM-215	ENST00000565154	DIP2C	Q9Y2E4	1556 aa		28.59	■■■□□ 2.17
PKM-215	ENST00000565154	CCDC7	Q96M83	1385 aa		28.58	■■■□□ 2.17
PKM-215	ENST00000565154	KDM2A	Q9Y2K7	1162 aa		28.57	■■■□□ 2.16
PKM-215	ENST00000565154	LAMC1	P11047	1609 aa		28.56	■■■□□ 2.16
PKM-215	ENST00000565154	CNTLN	Q9NXG0	1405 aa		28.54	■■■□□ 2.16
PKM-215	ENST00000565154	NEURL4	Q96JN8	1562 aa		28.53	■■■□□ 2.16
PKM-215	ENST00000565154	ANP32C	O43423	234 aa		28.53	■■■□□ 2.16
PKM-215	ENST00000565154	TSPOAP1	O95153	1857 aa		28.53	■■■□□ 2.16
PKM-215	ENST00000565154	C11orf95	C9JLR9	678 aa	Predicted RBP	28.52	■■■□□ 2.16
PKM-215	ENST00000565154	RGL3	Q3MIN7	710 aa		28.52	■■■□□ 2.16
PKM-215	ENST00000565154	RAPGEF3	O95398	923 aa		28.51	■■■□□ 2.15
PKM-215	ENST00000565154	ZMYM4	Q5VZL5	1548 aa		28.51	■■■□□ 2.15
PKM-215	ENST00000565154	CARD11	Q9BXL7	1154 aa		28.49	■■■□□ 2.15
PKM-215	ENST00000565154	ROCK2	O75116	1388 aa	Known RBP	28.49	■■■□□ 2.15
PKM-215	ENST00000565154	KIF1B	O60333	1816 aa		28.48	■■■□□ 2.15
PKM-215	ENST00000565154	FAM69C	Q0P6D2	419 aa		28.48	■■■□□ 2.15
PKM-215	ENST00000565154	KIF7	Q2M1P5	1343 aa		28.48	■■■□□ 2.15
PKM-215	ENST00000565154	MADD	Q8WXG6	1647 aa		28.47	■■■□□ 2.15
PKM-215	ENST00000565154	KIF13A	Q9H1H9	1805 aa		28.46	■■■□□ 2.15
PKM-215	ENST00000565154	GPRASP1	Q5JY77	1395 aa		28.46	■■■□□ 2.15
PKM-215	ENST00000565154	CCER2	I3L3R5	266 aa		28.45	■■■□□ 2.14
PKM-215	ENST00000565154	ABCC3	O15438	1527 aa		28.44	■■■□□ 2.14
PKM-215	ENST00000565154	CAMSAP1	Q5T5Y3	1602 aa		28.44	■■■□□ 2.14
PKM-215	ENST00000565154	ZC3H13	Q5T200	1668 aa	Known RBP	28.43	■■■□□ 2.14
PKM-215	ENST00000565154	UGGT1	Q9NYU2	1555 aa		28.41	■■■□□ 2.14
PKM-215	ENST00000565154	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.4	■■■□□ 2.14
PKM-215	ENST00000565154	YEATS2	Q9ULM3	1422 aa		28.4	■■■□□ 2.14
PKM-215	ENST00000565154	IFT172	Q9UG01	1749 aa		28.39	■■■□□ 2.14
PKM-215	ENST00000565154	MROH2A	A6NES4	1674 aa		28.38	■■■□□ 2.13
PKM-215	ENST00000565154	NPAT	Q14207	1427 aa		28.37	■■■□□ 2.13
PKM-215	ENST00000565154	SCAF1	Q9H7N4	1312 aa	Known RBP	28.35	■■■□□ 2.13
PKM-215	ENST00000565154	STAC3	Q96MF2	364 aa		28.35	■■■□□ 2.13
PKM-215	ENST00000565154	KIAA1210	Q9ULL0	1709 aa		28.35	■■■□□ 2.13
PKM-215	ENST00000565154	GGT6	Q6P531	493 aa		28.35	■■■□□ 2.13
PKM-215	ENST00000565154	CFAP65	Q6ZU64	1925 aa	Known RBP	28.33	■■■□□ 2.13
PKM-215	ENST00000565154	ADGRB3	O60242	1522 aa		28.32	■■■□□ 2.12
PKM-215	ENST00000565154	IQGAP1	P46940	1657 aa		28.32	■■■□□ 2.12
PKM-215	ENST00000565154	RERE	Q9P2R6	1566 aa		28.32	■■■□□ 2.12
PKM-215	ENST00000565154	SIGLEC1	Q9BZZ2	1709 aa		28.32	■■■□□ 2.12
PKM-215	ENST00000565154	ST20-MTHFS	A0A0A6YYL1	179 aa		28.31	■■■□□ 2.12
PKM-215	ENST00000565154	NBPF1	Q3BBV0	1214 aa		28.31	■■■□□ 2.12
PKM-215	ENST00000565154	MYOM2	P54296	1465 aa		28.31	■■■□□ 2.12
PKM-215	ENST00000565154	WASHC2C	Q9Y4E1	1318 aa		28.29	■■■□□ 2.12
PKM-215	ENST00000565154	PIK3C2B	O00750	1634 aa		28.26	■■■□□ 2.11
PKM-215	ENST00000565154	ARHGAP31	Q2M1Z3	1444 aa		28.25	■■■□□ 2.11
PKM-215	ENST00000565154	NOS1	P29475	1434 aa		28.24	■■■□□ 2.11
PKM-215	ENST00000565154	PPL	O60437	1756 aa		28.24	■■■□□ 2.11
PKM-215	ENST00000565154	SYNM	O15061	1565 aa		28.22	■■■□□ 2.11
PKM-215	ENST00000565154	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.21	■■■□□ 2.11
PKM-215	ENST00000565154	AGL	P35573	1532 aa		28.21	■■■□□ 2.11
PKM-215	ENST00000565154	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.19	■■■□□ 2.1
PKM-215	ENST00000565154	NRXN1	Q9ULB1	1477 aa		28.19	■■■□□ 2.1
PKM-215	ENST00000565154	ARHGEF40	Q8TER5	1519 aa		28.18	■■■□□ 2.1
PKM-215	ENST00000565154	PREX1	Q8TCU6	1659 aa		28.18	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms