RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 NCOA1Q15788 1441 aa28.48■■■□□ 2.15
PKD1-229ENST00000564890 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.48■■■□□ 2.15
PKD1-229ENST00000564890 ERBINQ96RT1 1412 aa28.46■■■□□ 2.15
PKD1-229ENST00000564890 ZMYM3Q14202 1370 aa28.46■■■□□ 2.15
PKD1-229ENST00000564890 PTPRKQ15262 1439 aa28.45■■■□□ 2.15
PKD1-229ENST00000564890 RRBP1Q9P2E9 1410 aaKnown RBP28.45■■■□□ 2.15
PKD1-229ENST00000564890 RNF17Q9BXT8 1623 aaKnown RBP28.45■■■□□ 2.14
PKD1-229ENST00000564890 ITGAEP38570 1179 aa28.42■■■□□ 2.14
PKD1-229ENST00000564890 KDM5DQ9BY66 1539 aa28.42■■■□□ 2.14
PKD1-229ENST00000564890 FAM135AQ9P2D6 1515 aa28.42■■■□□ 2.14
PKD1-229ENST00000564890 WASHC2CQ9Y4E1 1318 aa28.41■■■□□ 2.14
PKD1-229ENST00000564890 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
PKD1-229ENST00000564890 MROH1Q8NDA8 1641 aa28.37■■■□□ 2.13
PKD1-229ENST00000564890 ROCK1Q13464 1354 aa28.36■■■□□ 2.13
PKD1-229ENST00000564890 PREX1Q8TCU6 1659 aa28.35■■■□□ 2.13
PKD1-229ENST00000564890 SETD1BQ9UPS6 1966 aaKnown RBP28.35■■■□□ 2.13
PKD1-229ENST00000564890 NPATQ14207 1427 aa28.35■■■□□ 2.13
PKD1-229ENST00000564890 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
PKD1-229ENST00000564890 ABCC3O15438 1527 aa28.33■■■□□ 2.13
PKD1-229ENST00000564890 UHRF1BP1Q6BDS2 1440 aa28.32■■■□□ 2.12
PKD1-229ENST00000564890 PRDM15P57071 1507 aaPredicted RBP28.32■■■□□ 2.12
PKD1-229ENST00000564890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.12
PKD1-229ENST00000564890 ZC3H13Q5T200 1668 aaKnown RBP28.31■■■□□ 2.12
PKD1-229ENST00000564890 DEPDC5O75140 1603 aa28.3■■■□□ 2.12
PKD1-229ENST00000564890 HSPA2P54652 639 aa28.29■■■□□ 2.12
PKD1-229ENST00000564890 PZPP20742 1482 aa28.28■■■□□ 2.12
PKD1-229ENST00000564890 CEP152O94986 1710 aa28.26■■■□□ 2.12
PKD1-229ENST00000564890 KANK1Q14678 1352 aa28.26■■■□□ 2.12
PKD1-229ENST00000564890 FBXO31Q5XUX0 539 aaPredicted RBP28.25■■■□□ 2.11
PKD1-229ENST00000564890 CAMSAP1Q5T5Y3 1602 aa28.22■■■□□ 2.11
PKD1-229ENST00000564890 VWDEQ8N2E2 1590 aa28.2■■■□□ 2.1
PKD1-229ENST00000564890 MYO3AQ8NEV4 1616 aa28.19■■■□□ 2.1
PKD1-229ENST00000564890 TNRQ92752 1358 aa28.19■■■□□ 2.1
PKD1-229ENST00000564890 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
PKD1-229ENST00000564890 ARHGAP31Q2M1Z3 1444 aa28.15■■■□□ 2.1
PKD1-229ENST00000564890 UNC13BO14795 1591 aa28.14■■■□□ 2.1
PKD1-229ENST00000564890 ERVK-7P63135 1459 aa28.14■■■□□ 2.09
PKD1-229ENST00000564890 ZNF142P52746 1687 aaPredicted RBP28.13■■■□□ 2.09
PKD1-229ENST00000564890 SPATA31D1Q6ZQQ2 1576 aa28.12■■■□□ 2.09
PKD1-229ENST00000564890 CEP170BQ9Y4F5 1589 aaPredicted RBP28.12■■■□□ 2.09
PKD1-229ENST00000564890 NAIPQ13075 1403 aa28.1■■■□□ 2.09
PKD1-229ENST00000564890 A2ML1A8K2U0 1454 aa28.1■■■□□ 2.09
PKD1-229ENST00000564890 CFAP65Q6ZU64 1925 aaKnown RBP28.09■■■□□ 2.09
PKD1-229ENST00000564890 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.08
PKD1-229ENST00000564890 GCC2Q8IWJ2 1684 aa28.07■■■□□ 2.08
PKD1-229ENST00000564890 HFM1A2PYH4 1435 aa28.07■■■□□ 2.08
PKD1-229ENST00000564890 NLRP1Q9C000 1473 aa28.07■■■□□ 2.08
PKD1-229ENST00000564890 NUP155O75694 1391 aa28.04■■■□□ 2.08
PKD1-229ENST00000564890 TET3O43151 1660 aa28.03■■■□□ 2.08
PKD1-229ENST00000564890 IQGAP3Q86VI3 1631 aa28.03■■■□□ 2.08
PKD1-229ENST00000564890 STRCQ7RTU9 1775 aa28.02■■■□□ 2.08
PKD1-229ENST00000564890 RPRD2Q5VT52 1461 aaKnown RBP27.98■■■□□ 2.07
PKD1-229ENST00000564890 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
PKD1-229ENST00000564890 PLA2R1Q13018 1463 aa27.97■■■□□ 2.07
PKD1-229ENST00000564890 NOS1P29475 1434 aa27.96■■■□□ 2.07
PKD1-229ENST00000564890 DMRT2Q9Y5R5 561 aa27.95■■■□□ 2.06
PKD1-229ENST00000564890 THEMISQ8N1K5 641 aaPredicted RBP27.94■■■□□ 2.06
PKD1-229ENST00000564890 SYNMO15061 1565 aa27.94■■■□□ 2.06
PKD1-229ENST00000564890 NCKAP5LQ9HCH0 1330 aa27.93■■■□□ 2.06
PKD1-229ENST00000564890 E9PCH4 1651 aa27.92■■■□□ 2.06
PKD1-229ENST00000564890 PKD2Q13563 968 aa27.91■■■□□ 2.06
PKD1-229ENST00000564890 TRIM52Q96A61 297 aa27.9■■■□□ 2.06
PKD1-229ENST00000564890 PTPRTO14522 1441 aa27.89■■■□□ 2.06
PKD1-229ENST00000564890 IDI1Q13907 227 aa27.88■■■□□ 2.05
PKD1-229ENST00000564890 UBR1Q8IWV7 1749 aa27.88■■■□□ 2.05
PKD1-229ENST00000564890 PIK3C2BO00750 1634 aa27.87■■■□□ 2.05
PKD1-229ENST00000564890 SLC52A1Q9NWF4 448 aa27.85■■■□□ 2.05
PKD1-229ENST00000564890 STAG3Q9UJ98 1225 aa27.85■■■□□ 2.05
PKD1-229ENST00000564890 ANKLE2Q86XL3 938 aa27.84■■■□□ 2.05
PKD1-229ENST00000564890 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
PKD1-229ENST00000564890 SETD5Q9C0A6 1442 aa27.82■■■□□ 2.04
PKD1-229ENST00000564890 NEURL4Q96JN8 1562 aa27.79■■■□□ 2.04
PKD1-229ENST00000564890 KDM5AP29375 1690 aaKnown RBP27.78■■■□□ 2.04
PKD1-229ENST00000564890 ADGRB3O60242 1522 aa27.78■■■□□ 2.04
PKD1-229ENST00000564890 SLC4A1APQ9BWU0 796 aaKnown RBP27.77■■■□□ 2.04
PKD1-229ENST00000564890 SLIT1O75093 1534 aa27.77■■■□□ 2.04
PKD1-229ENST00000564890 ARHGAP23Q9P227 1491 aa27.76■■■□□ 2.04
PKD1-229ENST00000564890 SPHKAPQ2M3C7 1700 aa27.75■■■□□ 2.03
PKD1-229ENST00000564890 TMEM2Q9UHN6 1383 aa27.74■■■□□ 2.03
PKD1-229ENST00000564890 MED14O60244 1454 aa27.73■■■□□ 2.03
PKD1-229ENST00000564890 NPHP4O75161 1426 aaPredicted RBP27.73■■■□□ 2.03
PKD1-229ENST00000564890 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
PKD1-229ENST00000564890 SCAF11Q99590 1463 aaKnown RBP27.72■■■□□ 2.03
PKD1-229ENST00000564890 TXNDC2Q86VQ3 553 aa27.72■■■□□ 2.03
PKD1-229ENST00000564890 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
PKD1-229ENST00000564890 LTKP29376 864 aa27.71■■■□□ 2.03
PKD1-229ENST00000564890 EID1Q9Y6B2 187 aa27.71■■■□□ 2.03
PKD1-229ENST00000564890 ACIN1Q9UKV3 1341 aaKnown RBP27.7■■■□□ 2.03
PKD1-229ENST00000564890 TMEM131LA2VDJ0 1609 aa27.7■■■□□ 2.02
PKD1-229ENST00000564890 IQGAP1P46940 1657 aa27.68■■■□□ 2.02
PKD1-229ENST00000564890 MYO5BQ9ULV0 1848 aa27.67■■■□□ 2.02
PKD1-229ENST00000564890 MPHOSPH9Q99550 1183 aa27.67■■■□□ 2.02
PKD1-229ENST00000564890 TRPM2O94759 1503 aa27.67■■■□□ 2.02
PKD1-229ENST00000564890 ZNF335Q9H4Z2 1342 aaPredicted RBP27.66■■■□□ 2.02
PKD1-229ENST00000564890 FOXD1Q16676 465 aa27.64■■■□□ 2.02
PKD1-229ENST00000564890 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
PKD1-229ENST00000564890 CERKQ8TCT0 537 aa27.62■■■□□ 2.01
PKD1-229ENST00000564890 LTBP4Q8N2S1 1624 aa27.62■■■□□ 2.01
PKD1-229ENST00000564890 ZFYVE9O95405 1425 aa27.61■■■□□ 2.01
PKD1-229ENST00000564890 RIMS2Q9UQ26 1411 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms