RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 KIF15Q9NS87 1388 aa29.55■■■□□ 2.32
CBFB-204ENST00000563939 SHANK2Q9UPX8 1470 aa29.54■■■□□ 2.32
CBFB-204ENST00000563939 ANKRD30AQ9BXX3 1397 aa29.52■■■□□ 2.32
CBFB-204ENST00000563939 DNMT1P26358 1616 aaKnown RBP29.51■■■□□ 2.31
CBFB-204ENST00000563939 PTPRKQ15262 1439 aa29.51■■■□□ 2.31
CBFB-204ENST00000563939 DUOX2Q9NRD8 1548 aa29.5■■■□□ 2.31
CBFB-204ENST00000563939 FBXO31Q5XUX0 539 aaPredicted RBP29.5■■■□□ 2.31
CBFB-204ENST00000563939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.48■■■□□ 2.311e-6■■■□□ 17.3
CBFB-204ENST00000563939 KDM5DQ9BY66 1539 aa29.47■■■□□ 2.31
CBFB-204ENST00000563939 CROCC2H7BZ55 1655 aa29.46■■■□□ 2.31
CBFB-204ENST00000563939 DMRT2Q9Y5R5 561 aa29.44■■■□□ 2.3
CBFB-204ENST00000563939 NCOA1Q15788 1441 aa29.43■■■□□ 2.3
CBFB-204ENST00000563939 ITGAEP38570 1179 aa29.42■■■□□ 2.3
CBFB-204ENST00000563939 FAM135AQ9P2D6 1515 aa29.41■■■□□ 2.3
CBFB-204ENST00000563939 ERBINQ96RT1 1412 aa29.41■■■□□ 2.3
CBFB-204ENST00000563939 EIF2AK4Q9P2K8 1649 aaKnown RBP29.41■■■□□ 2.3
CBFB-204ENST00000563939 TNRQ92752 1358 aa29.39■■■□□ 2.29
CBFB-204ENST00000563939 RNF17Q9BXT8 1623 aaKnown RBP29.38■■■□□ 2.29
CBFB-204ENST00000563939 PZPP20742 1482 aa29.38■■■□□ 2.29
CBFB-204ENST00000563939 KANK1Q14678 1352 aa29.35■■■□□ 2.29
CBFB-204ENST00000563939 ABCC3O15438 1527 aa29.35■■■□□ 2.29
CBFB-204ENST00000563939 ADGRL2O95490 1459 aa29.33■■■□□ 2.29
CBFB-204ENST00000563939 NCKAP5LQ9HCH0 1330 aa29.31■■■□□ 2.28
CBFB-204ENST00000563939 ILDR1Q86SU0 546 aaPredicted RBP29.31■■■□□ 2.28
CBFB-204ENST00000563939 MROH1Q8NDA8 1641 aa29.31■■■□□ 2.28
CBFB-204ENST00000563939 MYO3AQ8NEV4 1616 aa29.3■■■□□ 2.28
CBFB-204ENST00000563939 CAMSAP1Q5T5Y3 1602 aa29.29■■■□□ 2.28
CBFB-204ENST00000563939 STRCQ7RTU9 1775 aa29.29■■■□□ 2.28
CBFB-204ENST00000563939 CEP170BQ9Y4F5 1589 aaPredicted RBP29.28■■■□□ 2.28
CBFB-204ENST00000563939 A2ML1A8K2U0 1454 aa29.28■■■□□ 2.28
CBFB-204ENST00000563939 ANKRD50Q9ULJ7 1429 aa29.28■■■□□ 2.28
CBFB-204ENST00000563939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.26■■■□□ 2.27
CBFB-204ENST00000563939 ZC3H13Q5T200 1668 aaKnown RBP29.25■■■□□ 2.27
CBFB-204ENST00000563939 PKD2Q13563 968 aa29.25■■■□□ 2.27
CBFB-204ENST00000563939 THEMISQ8N1K5 641 aaPredicted RBP29.24■■■□□ 2.27
CBFB-204ENST00000563939 PTPRTO14522 1441 aa29.23■■■□□ 2.27
CBFB-204ENST00000563939 PRDM15P57071 1507 aaPredicted RBP29.23■■■□□ 2.27
CBFB-204ENST00000563939 ROCK1Q13464 1354 aa29.22■■■□□ 2.27
CBFB-204ENST00000563939 CEP152O94986 1710 aa29.22■■■□□ 2.27
CBFB-204ENST00000563939 NLRP1Q9C000 1473 aa29.2■■■□□ 2.26
CBFB-204ENST00000563939 ZNF142P52746 1687 aaPredicted RBP29.2■■■□□ 2.26
CBFB-204ENST00000563939 ERVK-7P63135 1459 aa29.19■■■□□ 2.26
CBFB-204ENST00000563939 CERKQ8TCT0 537 aa29.19■■■□□ 2.26
CBFB-204ENST00000563939 ARHGAP31Q2M1Z3 1444 aa29.18■■■□□ 2.26
CBFB-204ENST00000563939 PLA2R1Q13018 1463 aa29.17■■■□□ 2.26
CBFB-204ENST00000563939 DEPDC5O75140 1603 aa29.17■■■□□ 2.26
CBFB-204ENST00000563939 ANKLE2Q86XL3 938 aa29.16■■■□□ 2.26
CBFB-204ENST00000563939 SPATA31D1Q6ZQQ2 1576 aa29.15■■■□□ 2.26
CBFB-204ENST00000563939 RRBP1Q9P2E9 1410 aaKnown RBP29.15■■■□□ 2.26
CBFB-204ENST00000563939 FBXO41Q8TF61 875 aa29.15■■■□□ 2.26
CBFB-204ENST00000563939 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.26
CBFB-204ENST00000563939 UGGT1Q9NYU2 1555 aa29.13■■■□□ 2.25
CBFB-204ENST00000563939 LMTK2Q8IWU2 1503 aa29.1■■■□□ 2.25
CBFB-204ENST00000563939 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
CBFB-204ENST00000563939 STAG3Q9UJ98 1225 aa29.09■■■□□ 2.25
CBFB-204ENST00000563939 NUP155O75694 1391 aa29.04■■■□□ 2.24
CBFB-204ENST00000563939 IDI1Q13907 227 aa29.04■■■□□ 2.24
CBFB-204ENST00000563939 ZNF335Q9H4Z2 1342 aaPredicted RBP29.02■■■□□ 2.24
CBFB-204ENST00000563939 EFCAB6Q5THR3 1501 aa29■■■□□ 2.23
CBFB-204ENST00000563939 TXNDC2Q86VQ3 553 aa28.99■■■□□ 2.23
CBFB-204ENST00000563939 SLC52A1Q9NWF4 448 aa28.99■■■□□ 2.23
CBFB-204ENST00000563939 EID1Q9Y6B2 187 aa28.97■■■□□ 2.23
CBFB-204ENST00000563939 NOS1P29475 1434 aa28.96■■■□□ 2.23
CBFB-204ENST00000563939 UNC13BO14795 1591 aa28.96■■■□□ 2.23
CBFB-204ENST00000563939 RPRD2Q5VT52 1461 aaKnown RBP28.95■■■□□ 2.22
CBFB-204ENST00000563939 NPHP4O75161 1426 aaPredicted RBP28.94■■■□□ 2.22
CBFB-204ENST00000563939 LTKP29376 864 aa28.93■■■□□ 2.22
CBFB-204ENST00000563939 LTBP4Q8N2S1 1624 aa28.92■■■□□ 2.22
CBFB-204ENST00000563939 TET3O43151 1660 aa28.92■■■□□ 2.22
CBFB-204ENST00000563939 NEURL4Q96JN8 1562 aa28.92■■■□□ 2.22
CBFB-204ENST00000563939 UBR1Q8IWV7 1749 aa28.91■■■□□ 2.22
CBFB-204ENST00000563939 NAIPQ13075 1403 aa28.91■■■□□ 2.22
CBFB-204ENST00000563939 POLR1AO95602 1720 aaPredicted RBP28.91■■■□□ 2.22
CBFB-204ENST00000563939 SYNMO15061 1565 aa28.9■■■□□ 2.22
CBFB-204ENST00000563939 TRIM52Q96A61 297 aa28.9■■■□□ 2.22
CBFB-204ENST00000563939 PIK3C2BO00750 1634 aa28.9■■■□□ 2.22
CBFB-204ENST00000563939 CHGAP10645 457 aaKnown RBP28.89■■■□□ 2.22
CBFB-204ENST00000563939 MED14O60244 1454 aa28.89■■■□□ 2.22
CBFB-204ENST00000563939 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
CBFB-204ENST00000563939 SCAF11Q99590 1463 aaKnown RBP28.86■■■□□ 2.21
CBFB-204ENST00000563939 IQGAP3Q86VI3 1631 aa28.86■■■□□ 2.21
CBFB-204ENST00000563939 ARHGAP23Q9P227 1491 aa28.85■■■□□ 2.21
CBFB-204ENST00000563939 GCC2Q8IWJ2 1684 aa28.84■■■□□ 2.21
CBFB-204ENST00000563939 SLIT1O75093 1534 aa28.84■■■□□ 2.21
CBFB-204ENST00000563939 HFM1A2PYH4 1435 aa28.83■■■□□ 2.21
CBFB-204ENST00000563939 BCANQ96GW7 911 aa28.81■■■□□ 2.2
CBFB-204ENST00000563939 E9PCH4 1651 aa28.8■■■□□ 2.2
CBFB-204ENST00000563939 HDGFP51858 240 aaKnown RBP28.79■■■□□ 2.2
CBFB-204ENST00000563939 IQGAP1P46940 1657 aa28.79■■■□□ 2.2
CBFB-204ENST00000563939 SENP3Q9H4L4 574 aaPredicted RBP28.77■■■□□ 2.2
CBFB-204ENST00000563939 ADGRB3O60242 1522 aa28.77■■■□□ 2.2
CBFB-204ENST00000563939 IQSEC2Q5JU85 1478 aa28.75■■■□□ 2.19
CBFB-204ENST00000563939 UBAP1LF5GYI3 381 aa28.75■■■□□ 2.19
CBFB-204ENST00000563939 PPP1R15AO75807 674 aaPredicted RBP28.75■■■□□ 2.19
CBFB-204ENST00000563939 KDM5AP29375 1690 aaKnown RBP28.74■■■□□ 2.19
CBFB-204ENST00000563939 SLC4A1APQ9BWU0 796 aaKnown RBP28.74■■■□□ 2.19
CBFB-204ENST00000563939 SLC26A8Q96RN1 970 aa28.73■■■□□ 2.19
CBFB-204ENST00000563939 CPS1P31327 1500 aa28.71■■■□□ 2.19
CBFB-204ENST00000563939 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
CBFB-204ENST00000563939 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms