RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 A2MP01023 1474 aa32.05■■■□□ 2.72
LINC01960-201ENST00000563759 FAM135AQ9P2D6 1515 aa32.05■■■□□ 2.72
LINC01960-201ENST00000563759 DHX29Q7Z478 1369 aaKnown RBP32.04■■■□□ 2.72
LINC01960-201ENST00000563759 TRHP20396 242 aaPredicted RBP32.03■■■□□ 2.72
LINC01960-201ENST00000563759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.99■■■□□ 2.71
LINC01960-201ENST00000563759 BCORL1Q5H9F3 1711 aa31.97■■■□□ 2.71
LINC01960-201ENST00000563759 YEATS2Q9ULM3 1422 aa31.96■■■□□ 2.71
LINC01960-201ENST00000563759 FOXD1Q16676 465 aa31.96■■■□□ 2.71
LINC01960-201ENST00000563759 SIN3AQ96ST3 1273 aa31.96■■■□□ 2.71
LINC01960-201ENST00000563759 RNF17Q9BXT8 1623 aaKnown RBP31.95■■■□□ 2.7
LINC01960-201ENST00000563759 PRDM15P57071 1507 aaPredicted RBP31.95■■■□□ 2.7
LINC01960-201ENST00000563759 COL17A1Q9UMD9 1497 aaPredicted RBP31.94■■■□□ 2.7
LINC01960-201ENST00000563759 NEUROD1Q13562 356 aa31.94■■■□□ 2.7
LINC01960-201ENST00000563759 KIF3BO15066 747 aa31.93■■■□□ 2.7
LINC01960-201ENST00000563759 PKD2Q13563 968 aa31.93■■■□□ 2.7
LINC01960-201ENST00000563759 MROH1Q8NDA8 1641 aa31.92■■■□□ 2.7
LINC01960-201ENST00000563759 ANKRD30BQ9BXX2 1392 aa31.89■■■□□ 2.7
LINC01960-201ENST00000563759 KANK1Q14678 1352 aa31.87■■■□□ 2.69
LINC01960-201ENST00000563759 ARHGEF40Q8TER5 1519 aa31.87■■■□□ 2.69
LINC01960-201ENST00000563759 VWDEQ8N2E2 1590 aa31.87■■■□□ 2.69
LINC01960-201ENST00000563759 TET3O43151 1660 aa31.86■■■□□ 2.69
LINC01960-201ENST00000563759 CEP152O94986 1710 aa31.84■■■□□ 2.69
LINC01960-201ENST00000563759 ATP10AO60312 1499 aa31.83■■■□□ 2.69
LINC01960-201ENST00000563759 REREQ9P2R6 1566 aa31.83■■■□□ 2.69
LINC01960-201ENST00000563759 E9PCH4 1651 aa31.81■■■□□ 2.68
LINC01960-201ENST00000563759 TONSLQ96HA7 1378 aa31.8■■■□□ 2.68
LINC01960-201ENST00000563759 TIMELESSQ9UNS1 1208 aa31.78■■■□□ 2.68
LINC01960-201ENST00000563759 RPRD2Q5VT52 1461 aaKnown RBP31.78■■■□□ 2.68
LINC01960-201ENST00000563759 GGT6Q6P531 493 aa31.73■■■□□ 2.67
LINC01960-201ENST00000563759 EFCAB6Q5THR3 1501 aa31.72■■■□□ 2.67
LINC01960-201ENST00000563759 SPHKAPQ2M3C7 1700 aa31.72■■■□□ 2.67
LINC01960-201ENST00000563759 ZC3H13Q5T200 1668 aaKnown RBP31.72■■■□□ 2.67
LINC01960-201ENST00000563759 LMTK2Q8IWU2 1503 aa31.72■■■□□ 2.67
LINC01960-201ENST00000563759 SIGLEC1Q9BZZ2 1709 aa31.71■■■□□ 2.67
LINC01960-201ENST00000563759 AGLP35573 1532 aa31.7■■■□□ 2.67
LINC01960-201ENST00000563759 ABCC3O15438 1527 aa31.67■■■□□ 2.66
LINC01960-201ENST00000563759 CAMSAP1Q5T5Y3 1602 aa31.67■■■□□ 2.66
LINC01960-201ENST00000563759 CCDC144AA2RUR9 1427 aa31.64■■■□□ 2.66
LINC01960-201ENST00000563759 PLA2R1Q13018 1463 aa31.62■■■□□ 2.65
LINC01960-201ENST00000563759 WASHC2CQ9Y4E1 1318 aa31.62■■■□□ 2.65
LINC01960-201ENST00000563759 TRPM2O94759 1503 aa31.61■■■□□ 2.65
LINC01960-201ENST00000563759 CFAP65Q6ZU64 1925 aaKnown RBP31.61■■■□□ 2.65
LINC01960-201ENST00000563759 PPP1R15AO75807 674 aaPredicted RBP31.55■■■□□ 2.64
LINC01960-201ENST00000563759 PTPRTO14522 1441 aa31.55■■■□□ 2.64
LINC01960-201ENST00000563759 NPATQ14207 1427 aa31.53■■■□□ 2.64
LINC01960-201ENST00000563759 L3MBTL2Q969R5 705 aa31.52■■■□□ 2.64
LINC01960-201ENST00000563759 CLTCQ00610 1675 aaKnown RBP31.52■■■□□ 2.64
LINC01960-201ENST00000563759 CLTCL1P53675 1640 aa31.52■■■□□ 2.64
LINC01960-201ENST00000563759 KIF1BO60333 1816 aa31.46■■■□□ 2.63
LINC01960-201ENST00000563759 ARID4BQ4LE39 1312 aaPredicted RBP31.46■■■□□ 2.63
LINC01960-201ENST00000563759 MLECQ14165 292 aa31.45■■■□□ 2.63
LINC01960-201ENST00000563759 ARHGAP31Q2M1Z3 1444 aa31.45■■■□□ 2.63
LINC01960-201ENST00000563759 PPP6R1Q9UPN7 881 aa31.44■■■□□ 2.62
LINC01960-201ENST00000563759 PREX1Q8TCU6 1659 aa31.42■■■□□ 2.62
LINC01960-201ENST00000563759 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
LINC01960-201ENST00000563759 CNTLNQ9NXG0 1405 aa31.41■■■□□ 2.62
LINC01960-201ENST00000563759 SYNMO15061 1565 aa31.36■■■□□ 2.61
LINC01960-201ENST00000563759 NOS1P29475 1434 aa31.35■■■□□ 2.61
LINC01960-201ENST00000563759 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
LINC01960-201ENST00000563759 SPATA31E1Q6ZUB1 1445 aa31.35■■■□□ 2.61
LINC01960-201ENST00000563759 NEURL4Q96JN8 1562 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 PIK3C2BO00750 1634 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 RGL3Q3MIN7 710 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 MROH2AA6NES4 1674 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 DCAF11Q8TEB1 546 aa31.31■■■□□ 2.6
LINC01960-201ENST00000563759 FER1L4A9Z1Z3 1794 aa31.3■■■□□ 2.6
LINC01960-201ENST00000563759 ZNF316A6NFI3 1004 aaPredicted RBP31.29■■■□□ 2.6
LINC01960-201ENST00000563759 ZNF326Q5BKZ1 582 aaKnown RBP31.28■■■□□ 2.6
LINC01960-201ENST00000563759 ERVK-7P63135 1459 aa31.28■■■□□ 2.6
LINC01960-201ENST00000563759 ADGRB3O60242 1522 aa31.26■■■□□ 2.6
LINC01960-201ENST00000563759 UHRF1BP1Q6BDS2 1440 aa31.26■■■□□ 2.59
LINC01960-201ENST00000563759 NBPF8Q3BBV2 869 aa31.26■■■□□ 2.59
LINC01960-201ENST00000563759 KDM2AQ9Y2K7 1162 aa31.26■■■□□ 2.59
LINC01960-201ENST00000563759 SPATA31D1Q6ZQQ2 1576 aa31.23■■■□□ 2.59
LINC01960-201ENST00000563759 IFT172Q9UG01 1749 aa31.23■■■□□ 2.59
LINC01960-201ENST00000563759 ZMYM3Q14202 1370 aa31.2■■■□□ 2.59
LINC01960-201ENST00000563759 MYO5BQ9ULV0 1848 aa31.19■■■□□ 2.58
LINC01960-201ENST00000563759 FBXO31Q5XUX0 539 aaPredicted RBP31.19■■■□□ 2.58
LINC01960-201ENST00000563759 PRAG1Q86YV5 1406 aa31.18■■■□□ 2.58
LINC01960-201ENST00000563759 TRPM1Q7Z4N2 1603 aa31.18■■■□□ 2.58
LINC01960-201ENST00000563759 RALGAPBQ86X10 1494 aa31.18■■■□□ 2.58
LINC01960-201ENST00000563759 CHGAP10645 457 aaKnown RBP31.17■■■□□ 2.58
LINC01960-201ENST00000563759 PPLO60437 1756 aa31.16■■■□□ 2.58
LINC01960-201ENST00000563759 MADDQ8WXG6 1647 aa31.16■■■□□ 2.58
LINC01960-201ENST00000563759 SLC52A1Q9NWF4 448 aa31.16■■■□□ 2.58
LINC01960-201ENST00000563759 C3P01024 1663 aa31.14■■■□□ 2.58
LINC01960-201ENST00000563759 TMEM131LA2VDJ0 1609 aa31.12■■■□□ 2.57
LINC01960-201ENST00000563759 IDI1Q13907 227 aa31.1■■■□□ 2.57
LINC01960-201ENST00000563759 MYOM2P54296 1465 aa31.1■■■□□ 2.57
LINC01960-201ENST00000563759 STAC3Q96MF2 364 aa31.09■■■□□ 2.57
LINC01960-201ENST00000563759 RIMS1Q86UR5 1692 aaKnown RBP31.08■■■□□ 2.57
LINC01960-201ENST00000563759 ROCK2O75116 1388 aaKnown RBP31.04■■■□□ 2.56
LINC01960-201ENST00000563759 ADAMTSL3P82987 1691 aa31.04■■■□□ 2.56
LINC01960-201ENST00000563759 EIF4G2P78344 907 aaKnown RBP eCLIP31.04■■■□□ 2.56
LINC01960-201ENST00000563759 KIAA1210Q9ULL0 1709 aa31.03■■■□□ 2.56
LINC01960-201ENST00000563759 NEXMIFQ5QGS0 1516 aa31.02■■■□□ 2.56
LINC01960-201ENST00000563759 TNRQ92752 1358 aa31.02■■■□□ 2.56
LINC01960-201ENST00000563759 HIRIP3Q9BW71 556 aaPredicted RBP31.01■■■□□ 2.56
LINC01960-201ENST00000563759 LAMC1P11047 1609 aa31.01■■■□□ 2.56
LINC01960-201ENST00000563759 RPGRIP1LQ68CZ1 1315 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms