RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 A2MP01023 1474 aa32.05■■■□□ 2.72
LINC01960-201ENST00000563759 FAM135AQ9P2D6 1515 aa32.05■■■□□ 2.72
LINC01960-201ENST00000563759 DHX29Q7Z478 1369 aaKnown RBP32.04■■■□□ 2.72
LINC01960-201ENST00000563759 TRHP20396 242 aaPredicted RBP32.03■■■□□ 2.72
LINC01960-201ENST00000563759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.99■■■□□ 2.71
LINC01960-201ENST00000563759 BCORL1Q5H9F3 1711 aa31.97■■■□□ 2.71
LINC01960-201ENST00000563759 YEATS2Q9ULM3 1422 aa31.96■■■□□ 2.71
LINC01960-201ENST00000563759 FOXD1Q16676 465 aa31.96■■■□□ 2.71
LINC01960-201ENST00000563759 SIN3AQ96ST3 1273 aa31.96■■■□□ 2.71
LINC01960-201ENST00000563759 RNF17Q9BXT8 1623 aaKnown RBP31.95■■■□□ 2.7
LINC01960-201ENST00000563759 PRDM15P57071 1507 aaPredicted RBP31.95■■■□□ 2.7
LINC01960-201ENST00000563759 COL17A1Q9UMD9 1497 aaPredicted RBP31.94■■■□□ 2.7
LINC01960-201ENST00000563759 NEUROD1Q13562 356 aa31.94■■■□□ 2.7
LINC01960-201ENST00000563759 KIF3BO15066 747 aa31.93■■■□□ 2.7
LINC01960-201ENST00000563759 PKD2Q13563 968 aa31.93■■■□□ 2.7
LINC01960-201ENST00000563759 MROH1Q8NDA8 1641 aa31.92■■■□□ 2.7
LINC01960-201ENST00000563759 ANKRD30BQ9BXX2 1392 aa31.89■■■□□ 2.7
LINC01960-201ENST00000563759 KANK1Q14678 1352 aa31.87■■■□□ 2.69
LINC01960-201ENST00000563759 ARHGEF40Q8TER5 1519 aa31.87■■■□□ 2.69
LINC01960-201ENST00000563759 VWDEQ8N2E2 1590 aa31.87■■■□□ 2.69
LINC01960-201ENST00000563759 TET3O43151 1660 aa31.86■■■□□ 2.69
LINC01960-201ENST00000563759 CEP152O94986 1710 aa31.84■■■□□ 2.69
LINC01960-201ENST00000563759 ATP10AO60312 1499 aa31.83■■■□□ 2.69
LINC01960-201ENST00000563759 REREQ9P2R6 1566 aa31.83■■■□□ 2.69
LINC01960-201ENST00000563759 E9PCH4 1651 aa31.81■■■□□ 2.68
LINC01960-201ENST00000563759 TONSLQ96HA7 1378 aa31.8■■■□□ 2.68
LINC01960-201ENST00000563759 TIMELESSQ9UNS1 1208 aa31.78■■■□□ 2.68
LINC01960-201ENST00000563759 RPRD2Q5VT52 1461 aaKnown RBP31.78■■■□□ 2.68
LINC01960-201ENST00000563759 GGT6Q6P531 493 aa31.73■■■□□ 2.67
LINC01960-201ENST00000563759 EFCAB6Q5THR3 1501 aa31.72■■■□□ 2.67
LINC01960-201ENST00000563759 SPHKAPQ2M3C7 1700 aa31.72■■■□□ 2.67
LINC01960-201ENST00000563759 ZC3H13Q5T200 1668 aaKnown RBP31.72■■■□□ 2.67
LINC01960-201ENST00000563759 LMTK2Q8IWU2 1503 aa31.72■■■□□ 2.67
LINC01960-201ENST00000563759 SIGLEC1Q9BZZ2 1709 aa31.71■■■□□ 2.67
LINC01960-201ENST00000563759 AGLP35573 1532 aa31.7■■■□□ 2.67
LINC01960-201ENST00000563759 ABCC3O15438 1527 aa31.67■■■□□ 2.66
LINC01960-201ENST00000563759 CAMSAP1Q5T5Y3 1602 aa31.67■■■□□ 2.66
LINC01960-201ENST00000563759 CCDC144AA2RUR9 1427 aa31.64■■■□□ 2.66
LINC01960-201ENST00000563759 PLA2R1Q13018 1463 aa31.62■■■□□ 2.65
LINC01960-201ENST00000563759 WASHC2CQ9Y4E1 1318 aa31.62■■■□□ 2.65
LINC01960-201ENST00000563759 TRPM2O94759 1503 aa31.61■■■□□ 2.65
LINC01960-201ENST00000563759 CFAP65Q6ZU64 1925 aaKnown RBP31.61■■■□□ 2.65
LINC01960-201ENST00000563759 PPP1R15AO75807 674 aaPredicted RBP31.55■■■□□ 2.64
LINC01960-201ENST00000563759 PTPRTO14522 1441 aa31.55■■■□□ 2.64
LINC01960-201ENST00000563759 NPATQ14207 1427 aa31.53■■■□□ 2.64
LINC01960-201ENST00000563759 L3MBTL2Q969R5 705 aa31.52■■■□□ 2.64
LINC01960-201ENST00000563759 CLTCQ00610 1675 aaKnown RBP31.52■■■□□ 2.64
LINC01960-201ENST00000563759 CLTCL1P53675 1640 aa31.52■■■□□ 2.64
LINC01960-201ENST00000563759 KIF1BO60333 1816 aa31.46■■■□□ 2.63
LINC01960-201ENST00000563759 ARID4BQ4LE39 1312 aaPredicted RBP31.46■■■□□ 2.63
LINC01960-201ENST00000563759 MLECQ14165 292 aa31.45■■■□□ 2.63
LINC01960-201ENST00000563759 ARHGAP31Q2M1Z3 1444 aa31.45■■■□□ 2.63
LINC01960-201ENST00000563759 PPP6R1Q9UPN7 881 aa31.44■■■□□ 2.62
LINC01960-201ENST00000563759 PREX1Q8TCU6 1659 aa31.42■■■□□ 2.62
LINC01960-201ENST00000563759 UGGT1Q9NYU2 1555 aa31.42■■■□□ 2.62
LINC01960-201ENST00000563759 CNTLNQ9NXG0 1405 aa31.41■■■□□ 2.62
LINC01960-201ENST00000563759 SYNMO15061 1565 aa31.36■■■□□ 2.61
LINC01960-201ENST00000563759 NOS1P29475 1434 aa31.35■■■□□ 2.61
LINC01960-201ENST00000563759 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
LINC01960-201ENST00000563759 SPATA31E1Q6ZUB1 1445 aa31.35■■■□□ 2.61
LINC01960-201ENST00000563759 NEURL4Q96JN8 1562 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 PIK3C2BO00750 1634 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 RGL3Q3MIN7 710 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 MROH2AA6NES4 1674 aa31.33■■■□□ 2.61
LINC01960-201ENST00000563759 DCAF11Q8TEB1 546 aa31.31■■■□□ 2.6
LINC01960-201ENST00000563759 FER1L4A9Z1Z3 1794 aa31.3■■■□□ 2.6
LINC01960-201ENST00000563759 ZNF316A6NFI3 1004 aaPredicted RBP31.29■■■□□ 2.6
LINC01960-201ENST00000563759 ZNF326Q5BKZ1 582 aaKnown RBP31.28■■■□□ 2.6
LINC01960-201ENST00000563759 ERVK-7P63135 1459 aa31.28■■■□□ 2.6
LINC01960-201ENST00000563759 ADGRB3O60242 1522 aa31.26■■■□□ 2.6
LINC01960-201ENST00000563759 UHRF1BP1Q6BDS2 1440 aa31.26■■■□□ 2.59
LINC01960-201ENST00000563759 NBPF8Q3BBV2 869 aa31.26■■■□□ 2.59
LINC01960-201ENST00000563759 KDM2AQ9Y2K7 1162 aa31.26■■■□□ 2.59
LINC01960-201ENST00000563759 SPATA31D1Q6ZQQ2 1576 aa31.23■■■□□ 2.59
LINC01960-201ENST00000563759 IFT172Q9UG01 1749 aa31.23■■■□□ 2.59
LINC01960-201ENST00000563759 ZMYM3Q14202 1370 aa31.2■■■□□ 2.59
LINC01960-201ENST00000563759 MYO5BQ9ULV0 1848 aa31.19■■■□□ 2.58
LINC01960-201ENST00000563759 FBXO31Q5XUX0 539 aaPredicted RBP31.19■■■□□ 2.58
LINC01960-201ENST00000563759 PRAG1Q86YV5 1406 aa31.18■■■□□ 2.58
LINC01960-201ENST00000563759 TRPM1Q7Z4N2 1603 aa31.18■■■□□ 2.58
LINC01960-201ENST00000563759 RALGAPBQ86X10 1494 aa31.18■■■□□ 2.58
LINC01960-201ENST00000563759 CHGAP10645 457 aaKnown RBP31.17■■■□□ 2.58
LINC01960-201ENST00000563759 PPLO60437 1756 aa31.16■■■□□ 2.58
LINC01960-201ENST00000563759 MADDQ8WXG6 1647 aa31.16■■■□□ 2.58
LINC01960-201ENST00000563759 SLC52A1Q9NWF4 448 aa31.16■■■□□ 2.58
LINC01960-201ENST00000563759 C3P01024 1663 aa31.14■■■□□ 2.58
LINC01960-201ENST00000563759 TMEM131LA2VDJ0 1609 aa31.12■■■□□ 2.57
LINC01960-201ENST00000563759 IDI1Q13907 227 aa31.1■■■□□ 2.57
LINC01960-201ENST00000563759 MYOM2P54296 1465 aa31.1■■■□□ 2.57
LINC01960-201ENST00000563759 STAC3Q96MF2 364 aa31.09■■■□□ 2.57
LINC01960-201ENST00000563759 RIMS1Q86UR5 1692 aaKnown RBP31.08■■■□□ 2.57
LINC01960-201ENST00000563759 ROCK2O75116 1388 aaKnown RBP31.04■■■□□ 2.56
LINC01960-201ENST00000563759 ADAMTSL3P82987 1691 aa31.04■■■□□ 2.56
LINC01960-201ENST00000563759 EIF4G2P78344 907 aaKnown RBP eCLIP31.04■■■□□ 2.56
LINC01960-201ENST00000563759 KIAA1210Q9ULL0 1709 aa31.03■■■□□ 2.56
LINC01960-201ENST00000563759 NEXMIFQ5QGS0 1516 aa31.02■■■□□ 2.56
LINC01960-201ENST00000563759 TNRQ92752 1358 aa31.02■■■□□ 2.56
LINC01960-201ENST00000563759 HIRIP3Q9BW71 556 aaPredicted RBP31.01■■■□□ 2.56
LINC01960-201ENST00000563759 LAMC1P11047 1609 aa31.01■■■□□ 2.56
LINC01960-201ENST00000563759 RPGRIP1LQ68CZ1 1315 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms