RNA–Protein interactions for RNA: ENST00000563383.1

CX3CL1-202, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 5 BASIC

Gene CX3CL1, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-202ENST00000563383 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
CX3CL1-202ENST00000563383 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
CX3CL1-202ENST00000563383 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
CX3CL1-202ENST00000563383 RCAN3Q9UKA8 241 aa13.61□□□□□ -0.23
CX3CL1-202ENST00000563383 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
CX3CL1-202ENST00000563383 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
CX3CL1-202ENST00000563383 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
CX3CL1-202ENST00000563383 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
CX3CL1-202ENST00000563383 ANKRD30BQ9BXX2 1392 aa13.59□□□□□ -0.23
CX3CL1-202ENST00000563383 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
CX3CL1-202ENST00000563383 CHD1O14646 1710 aa13.58□□□□□ -0.23
CX3CL1-202ENST00000563383 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
CX3CL1-202ENST00000563383 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
CX3CL1-202ENST00000563383 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
CX3CL1-202ENST00000563383 KIF3BO15066 747 aa13.57□□□□□ -0.24
CX3CL1-202ENST00000563383 DENND4BO75064 1496 aaPredicted RBP13.56□□□□□ -0.24
CX3CL1-202ENST00000563383 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
CX3CL1-202ENST00000563383 RGS3P49796 1198 aa13.56□□□□□ -0.24
CX3CL1-202ENST00000563383 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
CX3CL1-202ENST00000563383 GGT6Q6P531 493 aa13.56□□□□□ -0.24
CX3CL1-202ENST00000563383 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
CX3CL1-202ENST00000563383 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
CX3CL1-202ENST00000563383 NBPF1Q3BBV0 1214 aa13.54□□□□□ -0.24
CX3CL1-202ENST00000563383 NUTM2DQ5VT03 806 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-202ENST00000563383 PPM1GO15355 546 aaPredicted RBP13.54□□□□□ -0.24
CX3CL1-202ENST00000563383 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
CX3CL1-202ENST00000563383 PLPPR3Q6T4P5 718 aa13.54□□□□□ -0.24
CX3CL1-202ENST00000563383 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
CX3CL1-202ENST00000563383 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
CX3CL1-202ENST00000563383 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
CX3CL1-202ENST00000563383 DNMT1P26358 1616 aaKnown RBP13.51□□□□□ -0.25
CX3CL1-202ENST00000563383 USP47Q96K76 1375 aa13.51□□□□□ -0.25
CX3CL1-202ENST00000563383 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
CX3CL1-202ENST00000563383 BACH2Q9BYV9 841 aa13.5□□□□□ -0.25
CX3CL1-202ENST00000563383 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
CX3CL1-202ENST00000563383 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
CX3CL1-202ENST00000563383 PZPP20742 1482 aa13.49□□□□□ -0.25
CX3CL1-202ENST00000563383 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
CX3CL1-202ENST00000563383 ABCA8O94911 1581 aa13.49□□□□□ -0.25
CX3CL1-202ENST00000563383 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
CX3CL1-202ENST00000563383 GSE1Q14687 1217 aa13.47□□□□□ -0.25
CX3CL1-202ENST00000563383 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
CX3CL1-202ENST00000563383 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
CX3CL1-202ENST00000563383 RPRD2Q5VT52 1461 aaKnown RBP13.46□□□□□ -0.25
CX3CL1-202ENST00000563383 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.25
CX3CL1-202ENST00000563383 RAPGEF3O95398 923 aa13.46□□□□□ -0.26
CX3CL1-202ENST00000563383 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.26
CX3CL1-202ENST00000563383 ZMYND15Q9H091 742 aa13.46□□□□□ -0.26
CX3CL1-202ENST00000563383 ABCC10Q5T3U5 1492 aa13.45□□□□□ -0.26
CX3CL1-202ENST00000563383 GCC2Q8IWJ2 1684 aa13.45□□□□□ -0.26
CX3CL1-202ENST00000563383 SCAPERQ9BY12 1400 aa13.45□□□□□ -0.26
CX3CL1-202ENST00000563383 C20orf194Q5TEA3 1177 aa13.45□□□□□ -0.26
CX3CL1-202ENST00000563383 CCDC141Q6ZP82 1450 aa13.45□□□□□ -0.26
CX3CL1-202ENST00000563383 MLECQ14165 292 aa13.44□□□□□ -0.26
CX3CL1-202ENST00000563383 TRAPPC8Q9Y2L5 1435 aa13.44□□□□□ -0.26
CX3CL1-202ENST00000563383 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
CX3CL1-202ENST00000563383 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
CX3CL1-202ENST00000563383 TTC37Q6PGP7 1564 aa13.43□□□□□ -0.26
CX3CL1-202ENST00000563383 RSPH4AQ5TD94 716 aa13.42□□□□□ -0.26
CX3CL1-202ENST00000563383 RSPH6AQ9H0K4 717 aa13.42□□□□□ -0.26
CX3CL1-202ENST00000563383 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
CX3CL1-202ENST00000563383 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
CX3CL1-202ENST00000563383 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
CX3CL1-202ENST00000563383 SAFB2Q14151 953 aaKnown RBP eCLIP13.42□□□□□ -0.26
CX3CL1-202ENST00000563383 KDM5BQ9UGL1 1544 aa13.4□□□□□ -0.26
CX3CL1-202ENST00000563383 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
CX3CL1-202ENST00000563383 DHX29Q7Z478 1369 aaKnown RBP13.4□□□□□ -0.26
CX3CL1-202ENST00000563383 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
CX3CL1-202ENST00000563383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.4□□□□□ -0.26
CX3CL1-202ENST00000563383 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
CX3CL1-202ENST00000563383 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
CX3CL1-202ENST00000563383 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
CX3CL1-202ENST00000563383 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
CX3CL1-202ENST00000563383 RALBP1Q15311 655 aa13.39□□□□□ -0.27
CX3CL1-202ENST00000563383 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
CX3CL1-202ENST00000563383 TEX14Q8IWB6 1497 aa13.38□□□□□ -0.27
CX3CL1-202ENST00000563383 MS4A1P11836 297 aa13.38□□□□□ -0.27
CX3CL1-202ENST00000563383 CANXP27824 592 aaKnown RBP13.37□□□□□ -0.27
CX3CL1-202ENST00000563383 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
CX3CL1-202ENST00000563383 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
CX3CL1-202ENST00000563383 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
CX3CL1-202ENST00000563383 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
CX3CL1-202ENST00000563383 PANK3Q9H999 370 aa13.35□□□□□ -0.27
CX3CL1-202ENST00000563383 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
CX3CL1-202ENST00000563383 CFAP65Q6ZU64 1925 aaKnown RBP13.34□□□□□ -0.27
CX3CL1-202ENST00000563383 PLCH2O75038 1416 aa13.34□□□□□ -0.27
CX3CL1-202ENST00000563383 NEUROD2Q15784 382 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 CDC42BPBQ9Y5S2 1711 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
CX3CL1-202ENST00000563383 FANCAO15360 1455 aa13.32□□□□□ -0.28
CX3CL1-202ENST00000563383 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
CX3CL1-202ENST00000563383 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
CX3CL1-202ENST00000563383 STK26Q9P289 416 aa13.32□□□□□ -0.28
CX3CL1-202ENST00000563383 ADGRL2O95490 1459 aa13.32□□□□□ -0.28
CX3CL1-202ENST00000563383 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms