RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
SPG7-206ENST00000562775 TIMELESSQ9UNS1 1208 aa20.43■□□□□ 0.86
SPG7-206ENST00000562775 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
SPG7-206ENST00000562775 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
SPG7-206ENST00000562775 PKD2Q13563 968 aa20.42■□□□□ 0.86
SPG7-206ENST00000562775 ANKRD30BQ9BXX2 1392 aa20.42■□□□□ 0.86
SPG7-206ENST00000562775 FOXD1Q16676 465 aa20.42■□□□□ 0.86
SPG7-206ENST00000562775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.866e-9■■■□□ 15.9
SPG7-206ENST00000562775 DEPDC5O75140 1603 aa20.41■□□□□ 0.86
SPG7-206ENST00000562775 DIP2CQ9Y2E4 1556 aa20.41■□□□□ 0.86
SPG7-206ENST00000562775 KIF3BO15066 747 aa20.4■□□□□ 0.86
SPG7-206ENST00000562775 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
SPG7-206ENST00000562775 TRHP20396 242 aaPredicted RBP20.38■□□□□ 0.85
SPG7-206ENST00000562775 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
SPG7-206ENST00000562775 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
SPG7-206ENST00000562775 PRDM15P57071 1507 aaPredicted RBP20.35■□□□□ 0.85
SPG7-206ENST00000562775 KANK1Q14678 1352 aa20.35■□□□□ 0.85
SPG7-206ENST00000562775 RNF17Q9BXT8 1623 aaKnown RBP20.34■□□□□ 0.85
SPG7-206ENST00000562775 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
SPG7-206ENST00000562775 MROH1Q8NDA8 1641 aa20.34■□□□□ 0.85
SPG7-206ENST00000562775 TONSLQ96HA7 1378 aa20.33■□□□□ 0.84
SPG7-206ENST00000562775 ATP10AO60312 1499 aa20.32■□□□□ 0.84
SPG7-206ENST00000562775 RPRD2Q5VT52 1461 aaKnown RBP20.31■□□□□ 0.84
SPG7-206ENST00000562775 REREQ9P2R6 1566 aa20.3■□□□□ 0.84
SPG7-206ENST00000562775 TET3O43151 1660 aa20.29■□□□□ 0.84
SPG7-206ENST00000562775 LMTK2Q8IWU2 1503 aa20.26■□□□□ 0.83
SPG7-206ENST00000562775 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
SPG7-206ENST00000562775 PPP1R15AO75807 674 aaPredicted RBP20.25■□□□□ 0.83
SPG7-206ENST00000562775 GGT6Q6P531 493 aa20.25■□□□□ 0.83
SPG7-206ENST00000562775 E9PCH4 1651 aa20.25■□□□□ 0.83
SPG7-206ENST00000562775 AGLP35573 1532 aa20.24■□□□□ 0.83
SPG7-206ENST00000562775 PLA2R1Q13018 1463 aa20.23■□□□□ 0.83
SPG7-206ENST00000562775 EFCAB6Q5THR3 1501 aa20.21■□□□□ 0.83
SPG7-206ENST00000562775 CEP152O94986 1710 aa20.21■□□□□ 0.83
SPG7-206ENST00000562775 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
SPG7-206ENST00000562775 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
SPG7-206ENST00000562775 WASHC2CQ9Y4E1 1318 aa20.19■□□□□ 0.82
SPG7-206ENST00000562775 ABCC3O15438 1527 aa20.19■□□□□ 0.82
SPG7-206ENST00000562775 PTPRTO14522 1441 aa20.19■□□□□ 0.82
SPG7-206ENST00000562775 ZC3H13Q5T200 1668 aaKnown RBP20.17■□□□□ 0.82
SPG7-206ENST00000562775 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
SPG7-206ENST00000562775 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
SPG7-206ENST00000562775 TRPM2O94759 1503 aa20.16■□□□□ 0.82
SPG7-206ENST00000562775 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
SPG7-206ENST00000562775 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
SPG7-206ENST00000562775 NPATQ14207 1427 aa20.12■□□□□ 0.81
SPG7-206ENST00000562775 ARHGAP31Q2M1Z3 1444 aa20.11■□□□□ 0.81
SPG7-206ENST00000562775 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.81
SPG7-206ENST00000562775 CLTCL1P53675 1640 aa20.08■□□□□ 0.8
SPG7-206ENST00000562775 CNTLNQ9NXG0 1405 aa20.06■□□□□ 0.8
SPG7-206ENST00000562775 NOS1P29475 1434 aa20.05■□□□□ 0.8
SPG7-206ENST00000562775 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
SPG7-206ENST00000562775 MLECQ14165 292 aa20.04■□□□□ 0.8
SPG7-206ENST00000562775 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
SPG7-206ENST00000562775 NBPF8Q3BBV2 869 aa20.03■□□□□ 0.8
SPG7-206ENST00000562775 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
SPG7-206ENST00000562775 NEURL4Q96JN8 1562 aa20.03■□□□□ 0.8
SPG7-206ENST00000562775 CFAP65Q6ZU64 1925 aaKnown RBP20.02■□□□□ 0.8
SPG7-206ENST00000562775 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
SPG7-206ENST00000562775 CLTCQ00610 1675 aaKnown RBP20.01■□□□□ 0.79
SPG7-206ENST00000562775 DCAF11Q8TEB1 546 aa20.01■□□□□ 0.79
SPG7-206ENST00000562775 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
SPG7-206ENST00000562775 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
SPG7-206ENST00000562775 KIF1BO60333 1816 aa19.99■□□□□ 0.79
SPG7-206ENST00000562775 PREX1Q8TCU6 1659 aa19.98■□□□□ 0.79
SPG7-206ENST00000562775 SYNMO15061 1565 aa19.97■□□□□ 0.79
SPG7-206ENST00000562775 STAC3Q96MF2 364 aa19.97■□□□□ 0.79
SPG7-206ENST00000562775 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
SPG7-206ENST00000562775 PIK3C2BO00750 1634 aa19.96■□□□□ 0.79
SPG7-206ENST00000562775 ERVK-7P63135 1459 aa19.95■□□□□ 0.78
SPG7-206ENST00000562775 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
SPG7-206ENST00000562775 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
SPG7-206ENST00000562775 ADGRB3O60242 1522 aa19.93■□□□□ 0.78
SPG7-206ENST00000562775 ZMYM3Q14202 1370 aa19.93■□□□□ 0.78
SPG7-206ENST00000562775 PRAG1Q86YV5 1406 aa19.93■□□□□ 0.78
SPG7-206ENST00000562775 FBXO31Q5XUX0 539 aaPredicted RBP19.92■□□□□ 0.78
SPG7-206ENST00000562775 SPATA31D1Q6ZQQ2 1576 aa19.92■□□□□ 0.78
SPG7-206ENST00000562775 RALGAPBQ86X10 1494 aa19.92■□□□□ 0.78
SPG7-206ENST00000562775 MROH2AA6NES4 1674 aa19.9■□□□□ 0.78
SPG7-206ENST00000562775 IDI1Q13907 227 aa19.9■□□□□ 0.78
SPG7-206ENST00000562775 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
SPG7-206ENST00000562775 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
SPG7-206ENST00000562775 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
SPG7-206ENST00000562775 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
SPG7-206ENST00000562775 MYOM2P54296 1465 aa19.86■□□□□ 0.77
SPG7-206ENST00000562775 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
SPG7-206ENST00000562775 MADDQ8WXG6 1647 aa19.85■□□□□ 0.77
SPG7-206ENST00000562775 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
SPG7-206ENST00000562775 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
SPG7-206ENST00000562775 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.76
SPG7-206ENST00000562775 TMEM131LA2VDJ0 1609 aa19.82■□□□□ 0.76
SPG7-206ENST00000562775 PPLO60437 1756 aa19.82■□□□□ 0.76
SPG7-206ENST00000562775 ROCK2O75116 1388 aaKnown RBP19.82■□□□□ 0.76
SPG7-206ENST00000562775 GPRASP1Q5JY77 1395 aa19.82■□□□□ 0.76
SPG7-206ENST00000562775 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
SPG7-206ENST00000562775 DIEXFQ68CQ4 756 aaKnown RBP19.8■□□□□ 0.76
SPG7-206ENST00000562775 NRXN1Q9ULB1 1477 aa19.8■□□□□ 0.76
SPG7-206ENST00000562775 TNRQ92752 1358 aa19.79■□□□□ 0.76
SPG7-206ENST00000562775 LAMC1P11047 1609 aa19.79■□□□□ 0.76
SPG7-206ENST00000562775 USP47Q96K76 1375 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms