RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 SETD5Q9C0A6 1442 aa17.37■□□□□ 0.37
HERC1-214ENST00000561400 EIF2AK4Q9P2K8 1649 aaKnown RBP17.35■□□□□ 0.37
HERC1-214ENST00000561400 BCORL1Q5H9F3 1711 aa17.34■□□□□ 0.37
HERC1-214ENST00000561400 AGLP35573 1532 aa17.34■□□□□ 0.37
HERC1-214ENST00000561400 KIF3BO15066 747 aa17.33■□□□□ 0.37
HERC1-214ENST00000561400 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.37
HERC1-214ENST00000561400 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
HERC1-214ENST00000561400 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
HERC1-214ENST00000561400 RNF17Q9BXT8 1623 aaKnown RBP17.3■□□□□ 0.36
HERC1-214ENST00000561400 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
HERC1-214ENST00000561400 GGT6Q6P531 493 aa17.28■□□□□ 0.36
HERC1-214ENST00000561400 UNC13BO14795 1591 aa17.28■□□□□ 0.36
HERC1-214ENST00000561400 MLECQ14165 292 aa17.27■□□□□ 0.35
HERC1-214ENST00000561400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.352e-7■■□□□ 13.7
HERC1-214ENST00000561400 PRDM15P57071 1507 aaPredicted RBP17.25■□□□□ 0.35
HERC1-214ENST00000561400 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
HERC1-214ENST00000561400 NUP155O75694 1391 aa17.23■□□□□ 0.35
HERC1-214ENST00000561400 VWDEQ8N2E2 1590 aa17.22■□□□□ 0.35
HERC1-214ENST00000561400 CEP152O94986 1710 aa17.22■□□□□ 0.35
HERC1-214ENST00000561400 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
HERC1-214ENST00000561400 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
HERC1-214ENST00000561400 PZPP20742 1482 aa17.19■□□□□ 0.34
HERC1-214ENST00000561400 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
HERC1-214ENST00000561400 KANK1Q14678 1352 aa17.19■□□□□ 0.34
HERC1-214ENST00000561400 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
HERC1-214ENST00000561400 WASHC2CQ9Y4E1 1318 aa17.18■□□□□ 0.34
HERC1-214ENST00000561400 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
HERC1-214ENST00000561400 FER1L4A9Z1Z3 1794 aa17.18■□□□□ 0.34
HERC1-214ENST00000561400 ABCC3O15438 1527 aa17.18■□□□□ 0.34
HERC1-214ENST00000561400 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
HERC1-214ENST00000561400 ZC3H13Q5T200 1668 aaKnown RBP17.17■□□□□ 0.34
HERC1-214ENST00000561400 ACIN1Q9UKV3 1341 aaKnown RBP17.17■□□□□ 0.34
HERC1-214ENST00000561400 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
HERC1-214ENST00000561400 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
HERC1-214ENST00000561400 TET3O43151 1660 aa17.15■□□□□ 0.34
HERC1-214ENST00000561400 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
HERC1-214ENST00000561400 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
HERC1-214ENST00000561400 SLC4A1APQ9BWU0 796 aaKnown RBP17.14■□□□□ 0.33
HERC1-214ENST00000561400 CFAP65Q6ZU64 1925 aaKnown RBP17.14■□□□□ 0.33
HERC1-214ENST00000561400 E9PCH4 1651 aa17.12■□□□□ 0.33
HERC1-214ENST00000561400 RIMS1Q86UR5 1692 aaKnown RBP17.12■□□□□ 0.33
HERC1-214ENST00000561400 ESF1Q9H501 851 aaKnown RBP17.12■□□□□ 0.33
HERC1-214ENST00000561400 EFCAB6Q5THR3 1501 aa17.12■□□□□ 0.33
HERC1-214ENST00000561400 MROH2AA6NES4 1674 aa17.12■□□□□ 0.33
HERC1-214ENST00000561400 CNTLNQ9NXG0 1405 aa17.11■□□□□ 0.33
HERC1-214ENST00000561400 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
HERC1-214ENST00000561400 PKD2Q13563 968 aa17.1■□□□□ 0.33
HERC1-214ENST00000561400 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
HERC1-214ENST00000561400 FOXD1Q16676 465 aa17.09■□□□□ 0.33
HERC1-214ENST00000561400 NPATQ14207 1427 aa17.09■□□□□ 0.33
HERC1-214ENST00000561400 C3P01024 1663 aa17.09■□□□□ 0.33
HERC1-214ENST00000561400 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.33
HERC1-214ENST00000561400 ARHGAP31Q2M1Z3 1444 aa17.08■□□□□ 0.32
HERC1-214ENST00000561400 CEBPAP49715 358 aaPredicted RBP17.06■□□□□ 0.32
HERC1-214ENST00000561400 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
HERC1-214ENST00000561400 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
HERC1-214ENST00000561400 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
HERC1-214ENST00000561400 SPHKAPQ2M3C7 1700 aa17.03■□□□□ 0.32
HERC1-214ENST00000561400 PTPRMP28827 1452 aa17.03■□□□□ 0.32
HERC1-214ENST00000561400 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
HERC1-214ENST00000561400 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
HERC1-214ENST00000561400 ERVK-7P63135 1459 aa17■□□□□ 0.31
HERC1-214ENST00000561400 PTPRTO14522 1441 aa17■□□□□ 0.31
HERC1-214ENST00000561400 NOS1P29475 1434 aa17■□□□□ 0.31
HERC1-214ENST00000561400 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
HERC1-214ENST00000561400 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
HERC1-214ENST00000561400 SYNMO15061 1565 aa17■□□□□ 0.31
HERC1-214ENST00000561400 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
HERC1-214ENST00000561400 TRPM2O94759 1503 aa16.97■□□□□ 0.31
HERC1-214ENST00000561400 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
HERC1-214ENST00000561400 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
HERC1-214ENST00000561400 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
HERC1-214ENST00000561400 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
HERC1-214ENST00000561400 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
HERC1-214ENST00000561400 TNRQ92752 1358 aa16.94■□□□□ 0.3
HERC1-214ENST00000561400 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
HERC1-214ENST00000561400 IDI1Q13907 227 aa16.92■□□□□ 0.3
HERC1-214ENST00000561400 CCDC144AA2RUR9 1427 aa16.91■□□□□ 0.3
HERC1-214ENST00000561400 EIF5BO60841 1220 aaKnown RBP16.91■□□□□ 0.3
HERC1-214ENST00000561400 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
HERC1-214ENST00000561400 SLC52A1Q9NWF4 448 aa16.9■□□□□ 0.3
HERC1-214ENST00000561400 CLSPNQ9HAW4 1339 aa16.9■□□□□ 0.3
HERC1-214ENST00000561400 KIF1BO60333 1816 aa16.89■□□□□ 0.29
HERC1-214ENST00000561400 MYO5BQ9ULV0 1848 aa16.89■□□□□ 0.29
HERC1-214ENST00000561400 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
HERC1-214ENST00000561400 NEUROD1Q13562 356 aa16.87■□□□□ 0.29
HERC1-214ENST00000561400 TMEM131LA2VDJ0 1609 aa16.86■□□□□ 0.29
HERC1-214ENST00000561400 UBR1Q8IWV7 1749 aa16.85■□□□□ 0.29
HERC1-214ENST00000561400 CEP170BQ9Y4F5 1589 aaPredicted RBP16.84■□□□□ 0.29
HERC1-214ENST00000561400 ZNF142P52746 1687 aaPredicted RBP16.84■□□□□ 0.29
HERC1-214ENST00000561400 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
HERC1-214ENST00000561400 CHGAP10645 457 aaKnown RBP16.84■□□□□ 0.29
HERC1-214ENST00000561400 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
HERC1-214ENST00000561400 KDM5AP29375 1690 aaKnown RBP16.83■□□□□ 0.29
HERC1-214ENST00000561400 A2ML1A8K2U0 1454 aa16.83■□□□□ 0.29
HERC1-214ENST00000561400 UHRF1BP1Q6BDS2 1440 aa16.82■□□□□ 0.28
HERC1-214ENST00000561400 RGL3Q3MIN7 710 aa16.81■□□□□ 0.28
HERC1-214ENST00000561400 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
HERC1-214ENST00000561400 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
HERC1-214ENST00000561400 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms