RNA–Protein interactions for RNA: ENST00000560887.1

TCF12-220, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-220ENST00000560887 PLXNC1O60486 1568 aa10.22□□□□□ -0.77
TCF12-220ENST00000560887 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
TCF12-220ENST00000560887 CFDP1Q9UEE9 299 aaPredicted RBP10.22□□□□□ -0.77
TCF12-220ENST00000560887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCF12-220ENST00000560887 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.77
TCF12-220ENST00000560887 PROM2Q8N271 834 aa10.21□□□□□ -0.77
TCF12-220ENST00000560887 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
TCF12-220ENST00000560887 GCC2Q8IWJ2 1684 aa10.19□□□□□ -0.78
TCF12-220ENST00000560887 ATP7AQ04656 1500 aa10.19□□□□□ -0.78
TCF12-220ENST00000560887 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
TCF12-220ENST00000560887 KIDINS220Q9ULH0 1771 aa10.19□□□□□ -0.78
TCF12-220ENST00000560887 ABCA6Q8N139 1617 aa10.18□□□□□ -0.78
TCF12-220ENST00000560887 MBD5Q9P267 1494 aa10.18□□□□□ -0.78
TCF12-220ENST00000560887 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
TCF12-220ENST00000560887 DAPK1P53355 1430 aa10.17□□□□□ -0.78
TCF12-220ENST00000560887 SCAPERQ9BY12 1400 aa10.17□□□□□ -0.78
TCF12-220ENST00000560887 REREQ9P2R6 1566 aa10.17□□□□□ -0.78
TCF12-220ENST00000560887 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
TCF12-220ENST00000560887 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 DIP2CQ9Y2E4 1556 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 ADGRL2O95490 1459 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 MLH3Q9UHC1 1453 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
TCF12-220ENST00000560887 PPARGC1BQ86YN6 1023 aaKnown RBP10.15□□□□□ -0.78
TCF12-220ENST00000560887 TRAPPC8Q9Y2L5 1435 aa10.15□□□□□ -0.79
TCF12-220ENST00000560887 HAX1O00165 279 aa10.14□□□□□ -0.79
TCF12-220ENST00000560887 ZNF777Q9ULD5 760 aaPredicted RBP10.14□□□□□ -0.79
TCF12-220ENST00000560887 RTEL1-TNFRSF6BF6WH68 1400 aa10.14□□□□□ -0.79
TCF12-220ENST00000560887 ABCC5O15440 1437 aa10.14□□□□□ -0.79
TCF12-220ENST00000560887 COL17A1Q9UMD9 1497 aaPredicted RBP10.13□□□□□ -0.79
TCF12-220ENST00000560887 EVX2Q03828 476 aa10.13□□□□□ -0.79
TCF12-220ENST00000560887 SP7Q8TDD2 431 aaPredicted RBP10.13□□□□□ -0.79
TCF12-220ENST00000560887 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
TCF12-220ENST00000560887 RTN4Q9NQC3 1192 aaKnown RBP10.12□□□□□ -0.79
TCF12-220ENST00000560887 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
TCF12-220ENST00000560887 FAM50AQ14320 339 aaKnown RBP10.11□□□□□ -0.79
TCF12-220ENST00000560887 DUOX2Q9NRD8 1548 aa10.11□□□□□ -0.79
TCF12-220ENST00000560887 ROCK1Q13464 1354 aa10.11□□□□□ -0.79
TCF12-220ENST00000560887 RNF17Q9BXT8 1623 aaKnown RBP10.11□□□□□ -0.79
TCF12-220ENST00000560887 CLSPNQ9HAW4 1339 aa10.1□□□□□ -0.79
TCF12-220ENST00000560887 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
TCF12-220ENST00000560887 DEPDC5O75140 1603 aa10.09□□□□□ -0.79
TCF12-220ENST00000560887 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
TCF12-220ENST00000560887 SPAG9O60271 1321 aaKnown RBP10.08□□□□□ -0.8
TCF12-220ENST00000560887 ERBINQ96RT1 1412 aa10.08□□□□□ -0.8
TCF12-220ENST00000560887 FAM135AQ9P2D6 1515 aa10.08□□□□□ -0.8
TCF12-220ENST00000560887 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
TCF12-220ENST00000560887 ANKRD30AQ9BXX3 1397 aa10.08□□□□□ -0.8
TCF12-220ENST00000560887 UNC13BO14795 1591 aa10.08□□□□□ -0.8
TCF12-220ENST00000560887 YEATS2Q9ULM3 1422 aa10.07□□□□□ -0.8
TCF12-220ENST00000560887 AGLP35573 1532 aa10.07□□□□□ -0.8
TCF12-220ENST00000560887 SIGLEC1Q9BZZ2 1709 aa10.07□□□□□ -0.8
TCF12-220ENST00000560887 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.8
TCF12-220ENST00000560887 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
TCF12-220ENST00000560887 PRDM15P57071 1507 aaPredicted RBP10.07□□□□□ -0.8
TCF12-220ENST00000560887 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
TCF12-220ENST00000560887 ATP10AO60312 1499 aa10.06□□□□□ -0.8
TCF12-220ENST00000560887 A2MP01023 1474 aa10.06□□□□□ -0.8
TCF12-220ENST00000560887 KIF15Q9NS87 1388 aa10.06□□□□□ -0.8
TCF12-220ENST00000560887 RAPGEF3O95398 923 aa10.06□□□□□ -0.8
TCF12-220ENST00000560887 PTPRKQ15262 1439 aa10.06□□□□□ -0.8
TCF12-220ENST00000560887 NCOA1Q15788 1441 aa10.06□□□□□ -0.8
TCF12-220ENST00000560887 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
TCF12-220ENST00000560887 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
TCF12-220ENST00000560887 AMER1Q5JTC6 1135 aaPredicted RBP10.05□□□□□ -0.8
TCF12-220ENST00000560887 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
TCF12-220ENST00000560887 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
TCF12-220ENST00000560887 AFAP1Q8N556 730 aa10.04□□□□□ -0.8
TCF12-220ENST00000560887 CCER1Q8TC90 406 aaPredicted RBP10.04□□□□□ -0.8
TCF12-220ENST00000560887 MROH1Q8NDA8 1641 aa10.04□□□□□ -0.8
TCF12-220ENST00000560887 MROH2AA6NES4 1674 aa10.02□□□□□ -0.8
TCF12-220ENST00000560887 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.8
TCF12-220ENST00000560887 IQGAP3Q86VI3 1631 aa10.02□□□□□ -0.81
TCF12-220ENST00000560887 CEP152O94986 1710 aa10.02□□□□□ -0.81
TCF12-220ENST00000560887 NAIPQ13075 1403 aa10.01□□□□□ -0.81
TCF12-220ENST00000560887 ANKRD50Q9ULJ7 1429 aa10.01□□□□□ -0.81
TCF12-220ENST00000560887 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
TCF12-220ENST00000560887 CAMSAP1Q5T5Y3 1602 aa10□□□□□ -0.81
TCF12-220ENST00000560887 DHX29Q7Z478 1369 aaKnown RBP10□□□□□ -0.81
TCF12-220ENST00000560887 TET3O43151 1660 aa9.99□□□□□ -0.81
TCF12-220ENST00000560887 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
TCF12-220ENST00000560887 VWDEQ8N2E2 1590 aa9.99□□□□□ -0.81
TCF12-220ENST00000560887 MADDQ8WXG6 1647 aa9.98□□□□□ -0.81
TCF12-220ENST00000560887 ITGAEP38570 1179 aa9.98□□□□□ -0.81
TCF12-220ENST00000560887 MNX1P50219 401 aaPredicted RBP9.98□□□□□ -0.81
TCF12-220ENST00000560887 CLTCQ00610 1675 aaKnown RBP9.98□□□□□ -0.81
TCF12-220ENST00000560887 CHIC2Q9UKJ5 165 aa9.97□□□□□ -0.81
TCF12-220ENST00000560887 ABCC3O15438 1527 aa9.97□□□□□ -0.81
TCF12-220ENST00000560887 EFCAB6Q5THR3 1501 aa9.97□□□□□ -0.81
TCF12-220ENST00000560887 LMTK2Q8IWU2 1503 aa9.97□□□□□ -0.81
TCF12-220ENST00000560887 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
TCF12-220ENST00000560887 FKBP8Q14318 412 aa9.96□□□□□ -0.82
TCF12-220ENST00000560887 ACIN1Q9UKV3 1341 aaKnown RBP9.96□□□□□ -0.82
TCF12-220ENST00000560887 SETD5Q9C0A6 1442 aa9.96□□□□□ -0.82
TCF12-220ENST00000560887 RRP7BPQ9NSQ0 103 aa9.95□□□□□ -0.82
TCF12-220ENST00000560887 CNTLNQ9NXG0 1405 aa9.95□□□□□ -0.82
TCF12-220ENST00000560887 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
TCF12-220ENST00000560887 E9PCH4 1651 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms