RNA–Protein interactions for RNA: ENST00000560887.1

TCF12-220, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-220ENST00000560887 AEBP2Q6ZN18 517 aaPredicted RBP19.46■□□□□ 0.71
TCF12-220ENST00000560887 CHIC1Q5VXU3 224 aa18.63■□□□□ 0.57
TCF12-220ENST00000560887 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
TCF12-220ENST00000560887 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
TCF12-220ENST00000560887 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
TCF12-220ENST00000560887 FOXD1Q16676 465 aa15.4■□□□□ 0.06
TCF12-220ENST00000560887 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
TCF12-220ENST00000560887 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
TCF12-220ENST00000560887 ADRA2BP18089 450 aa14.48□□□□□ -0.09
TCF12-220ENST00000560887 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
TCF12-220ENST00000560887 MSH5O43196 834 aa14.28□□□□□ -0.12
TCF12-220ENST00000560887 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
TCF12-220ENST00000560887 POTEDQ86YR6 584 aa13.66□□□□□ -0.22
TCF12-220ENST00000560887 ABCC9O60706 1549 aa13.43□□□□□ -0.26
TCF12-220ENST00000560887 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
TCF12-220ENST00000560887 MAPK8IP2Q13387 824 aaPredicted RBP13.26□□□□□ -0.29
TCF12-220ENST00000560887 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
TCF12-220ENST00000560887 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
TCF12-220ENST00000560887 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
TCF12-220ENST00000560887 NACADO15069 1562 aa13.18□□□□□ -0.3
TCF12-220ENST00000560887 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
TCF12-220ENST00000560887 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
TCF12-220ENST00000560887 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
TCF12-220ENST00000560887 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
TCF12-220ENST00000560887 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
TCF12-220ENST00000560887 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
TCF12-220ENST00000560887 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
TCF12-220ENST00000560887 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
TCF12-220ENST00000560887 SHROOM4Q9ULL8 1493 aa12.72□□□□□ -0.37
TCF12-220ENST00000560887 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
TCF12-220ENST00000560887 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
TCF12-220ENST00000560887 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
TCF12-220ENST00000560887 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
TCF12-220ENST00000560887 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
TCF12-220ENST00000560887 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
TCF12-220ENST00000560887 KCNA4P22459 653 aa12.42□□□□□ -0.42
TCF12-220ENST00000560887 EIF4G1Q04637 1599 aaKnown RBP12.36□□□□□ -0.43
TCF12-220ENST00000560887 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
TCF12-220ENST00000560887 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
TCF12-220ENST00000560887 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
TCF12-220ENST00000560887 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
TCF12-220ENST00000560887 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
TCF12-220ENST00000560887 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
TCF12-220ENST00000560887 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
TCF12-220ENST00000560887 SMARCA2P51531 1590 aa12.21□□□□□ -0.46
TCF12-220ENST00000560887 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
TCF12-220ENST00000560887 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
TCF12-220ENST00000560887 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
TCF12-220ENST00000560887 WIZO95785 1651 aa12.12□□□□□ -0.47
TCF12-220ENST00000560887 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
TCF12-220ENST00000560887 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
TCF12-220ENST00000560887 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
TCF12-220ENST00000560887 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
TCF12-220ENST00000560887 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
TCF12-220ENST00000560887 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
TCF12-220ENST00000560887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.48
TCF12-220ENST00000560887 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
TCF12-220ENST00000560887 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
TCF12-220ENST00000560887 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
TCF12-220ENST00000560887 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
TCF12-220ENST00000560887 LAMC3Q9Y6N6 1575 aa11.82□□□□□ -0.52
TCF12-220ENST00000560887 CCDC88BA6NC98 1476 aa11.79□□□□□ -0.52
TCF12-220ENST00000560887 CFTRP13569 1480 aa11.73□□□□□ -0.53
TCF12-220ENST00000560887 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
TCF12-220ENST00000560887 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
TCF12-220ENST00000560887 KIF21AQ7Z4S6 1674 aa11.69□□□□□ -0.54
TCF12-220ENST00000560887 NESP48681 1621 aa11.68□□□□□ -0.54
TCF12-220ENST00000560887 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
TCF12-220ENST00000560887 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
TCF12-220ENST00000560887 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
TCF12-220ENST00000560887 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
TCF12-220ENST00000560887 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
TCF12-220ENST00000560887 ERCC6Q03468 1493 aa11.61□□□□□ -0.55
TCF12-220ENST00000560887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
TCF12-220ENST00000560887 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
TCF12-220ENST00000560887 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
TCF12-220ENST00000560887 WDR62O43379 1518 aa11.55□□□□□ -0.56
TCF12-220ENST00000560887 CAPN15O75808 1086 aa11.54□□□□□ -0.56
TCF12-220ENST00000560887 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
TCF12-220ENST00000560887 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
TCF12-220ENST00000560887 DSG3P32926 999 aa11.53□□□□□ -0.56
TCF12-220ENST00000560887 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
TCF12-220ENST00000560887 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
TCF12-220ENST00000560887 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
TCF12-220ENST00000560887 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
TCF12-220ENST00000560887 APLP2Q06481 763 aa11.49□□□□□ -0.57
TCF12-220ENST00000560887 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
TCF12-220ENST00000560887 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
TCF12-220ENST00000560887 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
TCF12-220ENST00000560887 CUX1P39880 1505 aa11.46□□□□□ -0.57
TCF12-220ENST00000560887 CUX2O14529 1486 aa11.46□□□□□ -0.57
TCF12-220ENST00000560887 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
TCF12-220ENST00000560887 ZBTB22O15209 634 aa11.45□□□□□ -0.58
TCF12-220ENST00000560887 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
TCF12-220ENST00000560887 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
TCF12-220ENST00000560887 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
TCF12-220ENST00000560887 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.58
TCF12-220ENST00000560887 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
TCF12-220ENST00000560887 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
TCF12-220ENST00000560887 TARBP1Q13395 1621 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms