RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
RABGGTA-218ENST00000560777 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
RABGGTA-218ENST00000560777 ANKRD50Q9ULJ7 1429 aa18.09■□□□□ 0.49
RABGGTA-218ENST00000560777 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
RABGGTA-218ENST00000560777 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.49
RABGGTA-218ENST00000560777 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
RABGGTA-218ENST00000560777 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
RABGGTA-218ENST00000560777 RNF17Q9BXT8 1623 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-218ENST00000560777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.487e-7■■□□□ 13.4
RABGGTA-218ENST00000560777 MROH1Q8NDA8 1641 aa18.04■□□□□ 0.48
RABGGTA-218ENST00000560777 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-218ENST00000560777 NAIPQ13075 1403 aa18.02■□□□□ 0.48
RABGGTA-218ENST00000560777 KDM5DQ9BY66 1539 aa18.01■□□□□ 0.47
RABGGTA-218ENST00000560777 DEPDC5O75140 1603 aa18.01■□□□□ 0.47
RABGGTA-218ENST00000560777 MROH2AA6NES4 1674 aa18■□□□□ 0.47
RABGGTA-218ENST00000560777 C3P01024 1663 aa18■□□□□ 0.47
RABGGTA-218ENST00000560777 FAM135AQ9P2D6 1515 aa18■□□□□ 0.47
RABGGTA-218ENST00000560777 HFM1A2PYH4 1435 aa17.99■□□□□ 0.47
RABGGTA-218ENST00000560777 ABCC3O15438 1527 aa17.99■□□□□ 0.47
RABGGTA-218ENST00000560777 PRDM15P57071 1507 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-218ENST00000560777 KANK1Q14678 1352 aa17.99■□□□□ 0.47
RABGGTA-218ENST00000560777 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-218ENST00000560777 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.47
RABGGTA-218ENST00000560777 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-218ENST00000560777 SETD1BQ9UPS6 1966 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-218ENST00000560777 NPATQ14207 1427 aa17.94■□□□□ 0.46
RABGGTA-218ENST00000560777 CEP152O94986 1710 aa17.94■□□□□ 0.46
RABGGTA-218ENST00000560777 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
RABGGTA-218ENST00000560777 NUP155O75694 1391 aa17.93■□□□□ 0.46
RABGGTA-218ENST00000560777 PZPP20742 1482 aa17.93■□□□□ 0.46
RABGGTA-218ENST00000560777 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
RABGGTA-218ENST00000560777 UNC13BO14795 1591 aa17.92■□□□□ 0.46
RABGGTA-218ENST00000560777 ARHGAP31Q2M1Z3 1444 aa17.91■□□□□ 0.46
RABGGTA-218ENST00000560777 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
RABGGTA-218ENST00000560777 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
RABGGTA-218ENST00000560777 LMTK3Q96Q04 1460 aa17.88■□□□□ 0.45
RABGGTA-218ENST00000560777 TRIM52Q96A61 297 aa17.88■□□□□ 0.45
RABGGTA-218ENST00000560777 CFAP65Q6ZU64 1925 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-218ENST00000560777 TNRQ92752 1358 aa17.87■□□□□ 0.45
RABGGTA-218ENST00000560777 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
RABGGTA-218ENST00000560777 IQGAP3Q86VI3 1631 aa17.86■□□□□ 0.45
RABGGTA-218ENST00000560777 HSPA2P54652 639 aa17.85■□□□□ 0.45
RABGGTA-218ENST00000560777 ERVK-7P63135 1459 aa17.85■□□□□ 0.45
RABGGTA-218ENST00000560777 EFCAB6Q5THR3 1501 aa17.85■□□□□ 0.45
RABGGTA-218ENST00000560777 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
RABGGTA-218ENST00000560777 SPATA31D1Q6ZQQ2 1576 aa17.84■□□□□ 0.45
RABGGTA-218ENST00000560777 TET3O43151 1660 aa17.83■□□□□ 0.45
RABGGTA-218ENST00000560777 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.45
RABGGTA-218ENST00000560777 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-218ENST00000560777 RPRD2Q5VT52 1461 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-218ENST00000560777 NOS1P29475 1434 aa17.81■□□□□ 0.44
RABGGTA-218ENST00000560777 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-218ENST00000560777 HRCP23327 699 aa17.8■□□□□ 0.44
RABGGTA-218ENST00000560777 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-218ENST00000560777 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
RABGGTA-218ENST00000560777 E9PCH4 1651 aa17.79■□□□□ 0.44
RABGGTA-218ENST00000560777 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
RABGGTA-218ENST00000560777 NLRP1Q9C000 1473 aa17.78■□□□□ 0.44
RABGGTA-218ENST00000560777 PKD2Q13563 968 aa17.78■□□□□ 0.44
RABGGTA-218ENST00000560777 IDI1Q13907 227 aa17.78■□□□□ 0.44
RABGGTA-218ENST00000560777 MPHOSPH9Q99550 1183 aa17.78■□□□□ 0.44
RABGGTA-218ENST00000560777 CEP170BQ9Y4F5 1589 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-218ENST00000560777 SLC52A1Q9NWF4 448 aa17.76■□□□□ 0.43
RABGGTA-218ENST00000560777 SYNMO15061 1565 aa17.75■□□□□ 0.43
RABGGTA-218ENST00000560777 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-218ENST00000560777 THEMISQ8N1K5 641 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-218ENST00000560777 PTPRTO14522 1441 aa17.73■□□□□ 0.43
RABGGTA-218ENST00000560777 FOXD1Q16676 465 aa17.73■□□□□ 0.43
RABGGTA-218ENST00000560777 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
RABGGTA-218ENST00000560777 PLA2R1Q13018 1463 aa17.69■□□□□ 0.42
RABGGTA-218ENST00000560777 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
RABGGTA-218ENST00000560777 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
RABGGTA-218ENST00000560777 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
RABGGTA-218ENST00000560777 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
RABGGTA-218ENST00000560777 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
RABGGTA-218ENST00000560777 ANKLE2Q86XL3 938 aa17.66■□□□□ 0.42
RABGGTA-218ENST00000560777 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
RABGGTA-218ENST00000560777 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-218ENST00000560777 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
RABGGTA-218ENST00000560777 TRPM2O94759 1503 aa17.63■□□□□ 0.41
RABGGTA-218ENST00000560777 LTKP29376 864 aa17.63■□□□□ 0.41
RABGGTA-218ENST00000560777 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
RABGGTA-218ENST00000560777 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
RABGGTA-218ENST00000560777 TXNDC2Q86VQ3 553 aa17.62■□□□□ 0.41
RABGGTA-218ENST00000560777 ARHGAP23Q9P227 1491 aa17.62■□□□□ 0.41
RABGGTA-218ENST00000560777 ADGRB3O60242 1522 aa17.62■□□□□ 0.41
RABGGTA-218ENST00000560777 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
RABGGTA-218ENST00000560777 SLIT1O75093 1534 aa17.61■□□□□ 0.41
RABGGTA-218ENST00000560777 PCGF6Q9BYE7 350 aa17.6■□□□□ 0.41
RABGGTA-218ENST00000560777 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
RABGGTA-218ENST00000560777 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
RABGGTA-218ENST00000560777 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.4
RABGGTA-218ENST00000560777 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.4
RABGGTA-218ENST00000560777 MED14O60244 1454 aa17.56■□□□□ 0.4
RABGGTA-218ENST00000560777 CCDC144AA2RUR9 1427 aa17.56■□□□□ 0.4
RABGGTA-218ENST00000560777 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-218ENST00000560777 NEURL4Q96JN8 1562 aa17.56■□□□□ 0.4
RABGGTA-218ENST00000560777 SCAF11Q99590 1463 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-218ENST00000560777 ZFYVE9O95405 1425 aa17.55■□□□□ 0.4
RABGGTA-218ENST00000560777 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms