RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
AC087878.1-201ENST00000560709 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
AC087878.1-201ENST00000560709 ANKRD30BQ9BXX2 1392 aa17.15■□□□□ 0.34
AC087878.1-201ENST00000560709 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
AC087878.1-201ENST00000560709 KANK1Q14678 1352 aa17.14■□□□□ 0.33
AC087878.1-201ENST00000560709 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
AC087878.1-201ENST00000560709 FOXD1Q16676 465 aa17.12■□□□□ 0.33
AC087878.1-201ENST00000560709 BCORL1Q5H9F3 1711 aa17.12■□□□□ 0.33
AC087878.1-201ENST00000560709 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
AC087878.1-201ENST00000560709 FRMPD1Q5SYB0 1578 aa17.11■□□□□ 0.33
AC087878.1-201ENST00000560709 PKD2Q13563 968 aa17.1■□□□□ 0.33
AC087878.1-201ENST00000560709 RAPGEF3O95398 923 aa17.09■□□□□ 0.33
AC087878.1-201ENST00000560709 SIN3AQ96ST3 1273 aa17.09■□□□□ 0.33
AC087878.1-201ENST00000560709 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
AC087878.1-201ENST00000560709 ABCA6Q8N139 1617 aa17.09■□□□□ 0.33
AC087878.1-201ENST00000560709 TSPOAP1O95153 1857 aa17.08■□□□□ 0.33
AC087878.1-201ENST00000560709 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
AC087878.1-201ENST00000560709 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.32
AC087878.1-201ENST00000560709 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
AC087878.1-201ENST00000560709 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
AC087878.1-201ENST00000560709 REREQ9P2R6 1566 aa17.06■□□□□ 0.32
AC087878.1-201ENST00000560709 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
AC087878.1-201ENST00000560709 KIF3BO15066 747 aa17.05■□□□□ 0.32
AC087878.1-201ENST00000560709 ATP10AO60312 1499 aa17.05■□□□□ 0.32
AC087878.1-201ENST00000560709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
AC087878.1-201ENST00000560709 TET3O43151 1660 aa17.03■□□□□ 0.32
AC087878.1-201ENST00000560709 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.31
AC087878.1-201ENST00000560709 AGLP35573 1532 aa17.01■□□□□ 0.31
AC087878.1-201ENST00000560709 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
AC087878.1-201ENST00000560709 YEATS2Q9ULM3 1422 aa17■□□□□ 0.31
AC087878.1-201ENST00000560709 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
AC087878.1-201ENST00000560709 CCDC144AA2RUR9 1427 aa16.99■□□□□ 0.31
AC087878.1-201ENST00000560709 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
AC087878.1-201ENST00000560709 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
AC087878.1-201ENST00000560709 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.31
AC087878.1-201ENST00000560709 PTPRTO14522 1441 aa16.96■□□□□ 0.3
AC087878.1-201ENST00000560709 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
AC087878.1-201ENST00000560709 TRPM2O94759 1503 aa16.95■□□□□ 0.3
AC087878.1-201ENST00000560709 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
AC087878.1-201ENST00000560709 ABCC3O15438 1527 aa16.93■□□□□ 0.3
AC087878.1-201ENST00000560709 E9PCH4 1651 aa16.93■□□□□ 0.3
AC087878.1-201ENST00000560709 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
AC087878.1-201ENST00000560709 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
AC087878.1-201ENST00000560709 ARHGAP31Q2M1Z3 1444 aa16.92■□□□□ 0.3
AC087878.1-201ENST00000560709 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
AC087878.1-201ENST00000560709 GGT6Q6P531 493 aa16.91■□□□□ 0.3
AC087878.1-201ENST00000560709 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
AC087878.1-201ENST00000560709 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
AC087878.1-201ENST00000560709 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
AC087878.1-201ENST00000560709 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
AC087878.1-201ENST00000560709 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
AC087878.1-201ENST00000560709 CEP152O94986 1710 aa16.87■□□□□ 0.29
AC087878.1-201ENST00000560709 NPATQ14207 1427 aa16.87■□□□□ 0.29
AC087878.1-201ENST00000560709 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
AC087878.1-201ENST00000560709 CAMSAP1Q5T5Y3 1602 aa16.86■□□□□ 0.29
AC087878.1-201ENST00000560709 NOS1P29475 1434 aa16.82■□□□□ 0.28
AC087878.1-201ENST00000560709 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
AC087878.1-201ENST00000560709 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
AC087878.1-201ENST00000560709 RALGAPBQ86X10 1494 aa16.78■□□□□ 0.28
AC087878.1-201ENST00000560709 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
AC087878.1-201ENST00000560709 ESF1Q9H501 851 aaKnown RBP16.76■□□□□ 0.27
AC087878.1-201ENST00000560709 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
AC087878.1-201ENST00000560709 PRAG1Q86YV5 1406 aa16.75■□□□□ 0.27
AC087878.1-201ENST00000560709 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
AC087878.1-201ENST00000560709 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
AC087878.1-201ENST00000560709 KIF1BO60333 1816 aa16.74■□□□□ 0.27
AC087878.1-201ENST00000560709 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
AC087878.1-201ENST00000560709 MYOM2P54296 1465 aa16.73■□□□□ 0.27
AC087878.1-201ENST00000560709 NBPF8Q3BBV2 869 aa16.73■□□□□ 0.27
AC087878.1-201ENST00000560709 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
AC087878.1-201ENST00000560709 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
AC087878.1-201ENST00000560709 ARID4BQ4LE39 1312 aaPredicted RBP16.72■□□□□ 0.27
AC087878.1-201ENST00000560709 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
AC087878.1-201ENST00000560709 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
AC087878.1-201ENST00000560709 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
AC087878.1-201ENST00000560709 RGL3Q3MIN7 710 aa16.71■□□□□ 0.27
AC087878.1-201ENST00000560709 SYNMO15061 1565 aa16.71■□□□□ 0.27
AC087878.1-201ENST00000560709 SPATA31D1Q6ZQQ2 1576 aa16.71■□□□□ 0.27
AC087878.1-201ENST00000560709 CLTCQ00610 1675 aaKnown RBP16.71■□□□□ 0.27
AC087878.1-201ENST00000560709 MROH2AA6NES4 1674 aa16.7■□□□□ 0.26
AC087878.1-201ENST00000560709 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
AC087878.1-201ENST00000560709 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
AC087878.1-201ENST00000560709 LAMC1P11047 1609 aa16.69■□□□□ 0.26
AC087878.1-201ENST00000560709 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
AC087878.1-201ENST00000560709 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
AC087878.1-201ENST00000560709 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
AC087878.1-201ENST00000560709 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
AC087878.1-201ENST00000560709 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
AC087878.1-201ENST00000560709 MLECQ14165 292 aa16.66■□□□□ 0.26
AC087878.1-201ENST00000560709 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
AC087878.1-201ENST00000560709 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
AC087878.1-201ENST00000560709 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
AC087878.1-201ENST00000560709 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
AC087878.1-201ENST00000560709 KIAA1210Q9ULL0 1709 aa16.64■□□□□ 0.25
AC087878.1-201ENST00000560709 USP47Q96K76 1375 aa16.64■□□□□ 0.25
AC087878.1-201ENST00000560709 IFT172Q9UG01 1749 aa16.63■□□□□ 0.25
AC087878.1-201ENST00000560709 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
AC087878.1-201ENST00000560709 IDI1Q13907 227 aa16.62■□□□□ 0.25
AC087878.1-201ENST00000560709 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
AC087878.1-201ENST00000560709 VGFO15240 615 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms