RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
USP8-209ENST00000560297 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
USP8-209ENST00000560297 HRCP23327 699 aa18.31■□□□□ 0.52
USP8-209ENST00000560297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■□□□□ 10.8
USP8-209ENST00000560297 KANK1Q14678 1352 aa18.29■□□□□ 0.52
USP8-209ENST00000560297 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
USP8-209ENST00000560297 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
USP8-209ENST00000560297 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
USP8-209ENST00000560297 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
USP8-209ENST00000560297 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
USP8-209ENST00000560297 PCGF6Q9BYE7 350 aa18.25■□□□□ 0.51
USP8-209ENST00000560297 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
USP8-209ENST00000560297 NUP155O75694 1391 aa18.24■□□□□ 0.51
USP8-209ENST00000560297 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
USP8-209ENST00000560297 RAB3GAP2Q9H2M9 1393 aa18.23■□□□□ 0.51
USP8-209ENST00000560297 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
USP8-209ENST00000560297 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
USP8-209ENST00000560297 FAM135AQ9P2D6 1515 aa18.21■□□□□ 0.51
USP8-209ENST00000560297 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
USP8-209ENST00000560297 ADAMTSL3P82987 1691 aa18.18■□□□□ 0.5
USP8-209ENST00000560297 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
USP8-209ENST00000560297 KDM5DQ9BY66 1539 aa18.18■□□□□ 0.5
USP8-209ENST00000560297 DEPDC5O75140 1603 aa18.18■□□□□ 0.5
USP8-209ENST00000560297 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
USP8-209ENST00000560297 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
USP8-209ENST00000560297 UNC13BO14795 1591 aa18.16■□□□□ 0.5
USP8-209ENST00000560297 VWDEQ8N2E2 1590 aa18.15■□□□□ 0.5
USP8-209ENST00000560297 ABCC3O15438 1527 aa18.14■□□□□ 0.49
USP8-209ENST00000560297 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
USP8-209ENST00000560297 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
USP8-209ENST00000560297 ARHGAP31Q2M1Z3 1444 aa18.13■□□□□ 0.49
USP8-209ENST00000560297 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
USP8-209ENST00000560297 CEBPAP49715 358 aaPredicted RBP18.12■□□□□ 0.49
USP8-209ENST00000560297 PTPRMP28827 1452 aa18.11■□□□□ 0.49
USP8-209ENST00000560297 ZC3H13Q5T200 1668 aaKnown RBP18.1■□□□□ 0.49
USP8-209ENST00000560297 PKD2Q13563 968 aa18.1■□□□□ 0.49
USP8-209ENST00000560297 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
USP8-209ENST00000560297 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
USP8-209ENST00000560297 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
USP8-209ENST00000560297 CLTCQ00610 1675 aaKnown RBP18.08■□□□□ 0.48
USP8-209ENST00000560297 PZPP20742 1482 aa18.07■□□□□ 0.48
USP8-209ENST00000560297 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
USP8-209ENST00000560297 NPATQ14207 1427 aa18.07■□□□□ 0.48
USP8-209ENST00000560297 MROH2AA6NES4 1674 aa18.07■□□□□ 0.48
USP8-209ENST00000560297 RIMS1Q86UR5 1692 aaKnown RBP18.06■□□□□ 0.48
USP8-209ENST00000560297 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
USP8-209ENST00000560297 TET3O43151 1660 aa18.04■□□□□ 0.48
USP8-209ENST00000560297 CAMSAP1Q5T5Y3 1602 aa18.03■□□□□ 0.48
USP8-209ENST00000560297 CEP152O94986 1710 aa18.03■□□□□ 0.48
USP8-209ENST00000560297 SLC52A1Q9NWF4 448 aa18.01■□□□□ 0.47
USP8-209ENST00000560297 TNRQ92752 1358 aa18.01■□□□□ 0.47
USP8-209ENST00000560297 NOS1P29475 1434 aa18■□□□□ 0.47
USP8-209ENST00000560297 ERVK-7P63135 1459 aa18■□□□□ 0.47
USP8-209ENST00000560297 C3P01024 1663 aa17.99■□□□□ 0.47
USP8-209ENST00000560297 PTPRTO14522 1441 aa17.98■□□□□ 0.47
USP8-209ENST00000560297 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
USP8-209ENST00000560297 SPATA31D1Q6ZQQ2 1576 aa17.97■□□□□ 0.47
USP8-209ENST00000560297 MSH5O43196 834 aa17.96■□□□□ 0.47
USP8-209ENST00000560297 IDI1Q13907 227 aa17.96■□□□□ 0.47
USP8-209ENST00000560297 SETD1BQ9UPS6 1966 aaKnown RBP17.96■□□□□ 0.47
USP8-209ENST00000560297 E9PCH4 1651 aa17.96■□□□□ 0.47
USP8-209ENST00000560297 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
USP8-209ENST00000560297 ADRA2BP18089 450 aa17.94■□□□□ 0.46
USP8-209ENST00000560297 NLRP1Q9C000 1473 aa17.94■□□□□ 0.46
USP8-209ENST00000560297 ANKRD30BQ9BXX2 1392 aa17.93■□□□□ 0.46
USP8-209ENST00000560297 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
USP8-209ENST00000560297 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
USP8-209ENST00000560297 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
USP8-209ENST00000560297 PREX1Q8TCU6 1659 aa17.92■□□□□ 0.46
USP8-209ENST00000560297 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
USP8-209ENST00000560297 CFAP65Q6ZU64 1925 aaKnown RBP17.9■□□□□ 0.46
USP8-209ENST00000560297 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.46
USP8-209ENST00000560297 TRPM2O94759 1503 aa17.88■□□□□ 0.45
USP8-209ENST00000560297 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
USP8-209ENST00000560297 SYNMO15061 1565 aa17.87■□□□□ 0.45
USP8-209ENST00000560297 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
USP8-209ENST00000560297 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
USP8-209ENST00000560297 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
USP8-209ENST00000560297 SPHKAPQ2M3C7 1700 aa17.85■□□□□ 0.45
USP8-209ENST00000560297 CCER1Q8TC90 406 aaPredicted RBP17.85■□□□□ 0.45
USP8-209ENST00000560297 HDGFP51858 240 aaKnown RBP17.84■□□□□ 0.45
USP8-209ENST00000560297 UGGT1Q9NYU2 1555 aa17.83■□□□□ 0.44
USP8-209ENST00000560297 PIK3C2BO00750 1634 aa17.82■□□□□ 0.44
USP8-209ENST00000560297 CEP170BQ9Y4F5 1589 aaPredicted RBP17.82■□□□□ 0.44
USP8-209ENST00000560297 LMTK3Q96Q04 1460 aa17.82■□□□□ 0.44
USP8-209ENST00000560297 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
USP8-209ENST00000560297 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
USP8-209ENST00000560297 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
USP8-209ENST00000560297 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
USP8-209ENST00000560297 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
USP8-209ENST00000560297 EID1Q9Y6B2 187 aa17.8■□□□□ 0.44
USP8-209ENST00000560297 HSPA2P54652 639 aa17.79■□□□□ 0.44
USP8-209ENST00000560297 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
USP8-209ENST00000560297 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
USP8-209ENST00000560297 CLTCL1P53675 1640 aa17.79■□□□□ 0.44
USP8-209ENST00000560297 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
USP8-209ENST00000560297 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
USP8-209ENST00000560297 ADGRB3O60242 1522 aa17.77■□□□□ 0.44
USP8-209ENST00000560297 TXNDC2Q86VQ3 553 aa17.77■□□□□ 0.44
USP8-209ENST00000560297 STAC3Q96MF2 364 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms