RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
USP8-209ENST00000560297 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
USP8-209ENST00000560297 ABCC9O60706 1549 aa24.73■■□□□ 1.55
USP8-209ENST00000560297 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
USP8-209ENST00000560297 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
USP8-209ENST00000560297 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
USP8-209ENST00000560297 DCAF1Q9Y4B6 1507 aa24.01■■□□□ 1.43
USP8-209ENST00000560297 NACADO15069 1562 aa24.01■■□□□ 1.43
USP8-209ENST00000560297 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
USP8-209ENST00000560297 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
USP8-209ENST00000560297 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
USP8-209ENST00000560297 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
USP8-209ENST00000560297 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
USP8-209ENST00000560297 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.3
USP8-209ENST00000560297 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
USP8-209ENST00000560297 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
USP8-209ENST00000560297 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
USP8-209ENST00000560297 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
USP8-209ENST00000560297 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
USP8-209ENST00000560297 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
USP8-209ENST00000560297 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
USP8-209ENST00000560297 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
USP8-209ENST00000560297 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
USP8-209ENST00000560297 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
USP8-209ENST00000560297 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
USP8-209ENST00000560297 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
USP8-209ENST00000560297 NCAPD3P42695 1498 aa22.2■■□□□ 1.14
USP8-209ENST00000560297 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
USP8-209ENST00000560297 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
USP8-209ENST00000560297 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
USP8-209ENST00000560297 WIZO95785 1651 aa22.04■■□□□ 1.12
USP8-209ENST00000560297 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
USP8-209ENST00000560297 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
USP8-209ENST00000560297 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
USP8-209ENST00000560297 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
USP8-209ENST00000560297 CFTRP13569 1480 aa21.5■■□□□ 1.03
USP8-209ENST00000560297 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
USP8-209ENST00000560297 NESP48681 1621 aa21.47■■□□□ 1.03
USP8-209ENST00000560297 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
USP8-209ENST00000560297 ERCC6Q03468 1493 aa21.32■■□□□ 1
USP8-209ENST00000560297 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
USP8-209ENST00000560297 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
USP8-209ENST00000560297 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
USP8-209ENST00000560297 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
USP8-209ENST00000560297 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
USP8-209ENST00000560297 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
USP8-209ENST00000560297 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
USP8-209ENST00000560297 THOC2Q8NI27 1593 aaKnown RBP21.02■□□□□ 0.95
USP8-209ENST00000560297 WDR62O43379 1518 aa21■□□□□ 0.95
USP8-209ENST00000560297 CUX2O14529 1486 aa20.98■□□□□ 0.95
USP8-209ENST00000560297 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
USP8-209ENST00000560297 TOPBP1Q92547 1522 aa20.96■□□□□ 0.95
USP8-209ENST00000560297 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
USP8-209ENST00000560297 CUX1P39880 1505 aa20.91■□□□□ 0.94
USP8-209ENST00000560297 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
USP8-209ENST00000560297 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
USP8-209ENST00000560297 SOGA1O94964 1423 aa20.8■□□□□ 0.92
USP8-209ENST00000560297 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
USP8-209ENST00000560297 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
USP8-209ENST00000560297 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
USP8-209ENST00000560297 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
USP8-209ENST00000560297 BIVM-ERCC5R4GMW8 1640 aa20.76■□□□□ 0.91
USP8-209ENST00000560297 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
USP8-209ENST00000560297 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
USP8-209ENST00000560297 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
USP8-209ENST00000560297 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
USP8-209ENST00000560297 ZNF608Q9ULD9 1512 aaPredicted RBP20.61■□□□□ 0.89
USP8-209ENST00000560297 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.895e-9■■□□□ 13.1
USP8-209ENST00000560297 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
USP8-209ENST00000560297 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
USP8-209ENST00000560297 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
USP8-209ENST00000560297 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
USP8-209ENST00000560297 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
USP8-209ENST00000560297 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
USP8-209ENST00000560297 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
USP8-209ENST00000560297 IGF1RP08069 1367 aa20.42■□□□□ 0.86
USP8-209ENST00000560297 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
USP8-209ENST00000560297 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
USP8-209ENST00000560297 EEA1Q15075 1411 aa20.37■□□□□ 0.85
USP8-209ENST00000560297 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
USP8-209ENST00000560297 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
USP8-209ENST00000560297 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
USP8-209ENST00000560297 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
USP8-209ENST00000560297 FBLN2P98095 1184 aa20.34■□□□□ 0.85
USP8-209ENST00000560297 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
USP8-209ENST00000560297 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
USP8-209ENST00000560297 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
USP8-209ENST00000560297 CARMIL1Q5VZK9 1371 aa20.31■□□□□ 0.84
USP8-209ENST00000560297 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
USP8-209ENST00000560297 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
USP8-209ENST00000560297 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
USP8-209ENST00000560297 ADAMTS12P58397 1594 aa20.23■□□□□ 0.83
USP8-209ENST00000560297 CUL7Q14999 1698 aa20.22■□□□□ 0.83
USP8-209ENST00000560297 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
USP8-209ENST00000560297 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
USP8-209ENST00000560297 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
USP8-209ENST00000560297 CHD1O14646 1710 aa20.12■□□□□ 0.81
USP8-209ENST00000560297 NUP160Q12769 1436 aa20.1■□□□□ 0.81
USP8-209ENST00000560297 KIAA0586Q9BVV6 1533 aa20.03■□□□□ 0.8
USP8-209ENST00000560297 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms