RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 KIF3BO15066 747 aa24.27■■□□□ 1.48
TNFAIP2-205ENST00000559406 AGLP35573 1532 aa24.26■■□□□ 1.47
TNFAIP2-205ENST00000559406 PRDM15P57071 1507 aaPredicted RBP24.22■■□□□ 1.47
TNFAIP2-205ENST00000559406 KDM5DQ9BY66 1539 aa24.22■■□□□ 1.47
TNFAIP2-205ENST00000559406 PZPP20742 1482 aa24.22■■□□□ 1.47
TNFAIP2-205ENST00000559406 TRIM52Q96A61 297 aa24.21■■□□□ 1.47
TNFAIP2-205ENST00000559406 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.46
TNFAIP2-205ENST00000559406 IQGAP3Q86VI3 1631 aa24.2■■□□□ 1.46
TNFAIP2-205ENST00000559406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.2■■□□□ 1.46
TNFAIP2-205ENST00000559406 NUP155O75694 1391 aa24.19■■□□□ 1.46
TNFAIP2-205ENST00000559406 DHX57Q6P158 1386 aaKnown RBP24.19■■□□□ 1.46
TNFAIP2-205ENST00000559406 CEP152O94986 1710 aa24.18■■□□□ 1.46
TNFAIP2-205ENST00000559406 GGT6Q6P531 493 aa24.17■■□□□ 1.46
TNFAIP2-205ENST00000559406 FAM135AQ9P2D6 1515 aa24.17■■□□□ 1.46
TNFAIP2-205ENST00000559406 MLECQ14165 292 aa24.12■■□□□ 1.45
TNFAIP2-205ENST00000559406 MPHOSPH9Q99550 1183 aa24.12■■□□□ 1.45
TNFAIP2-205ENST00000559406 ARID4BQ4LE39 1312 aaPredicted RBP24.12■■□□□ 1.45
TNFAIP2-205ENST00000559406 ABCC3O15438 1527 aa24.11■■□□□ 1.45
TNFAIP2-205ENST00000559406 TET3O43151 1660 aa24.09■■□□□ 1.45
TNFAIP2-205ENST00000559406 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
TNFAIP2-205ENST00000559406 LMTK2Q8IWU2 1503 aa24.08■■□□□ 1.44
TNFAIP2-205ENST00000559406 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
TNFAIP2-205ENST00000559406 E9PCH4 1651 aa24.07■■□□□ 1.44
TNFAIP2-205ENST00000559406 FOXD1Q16676 465 aa24.07■■□□□ 1.44
TNFAIP2-205ENST00000559406 CLTCQ00610 1675 aaKnown RBP24.07■■□□□ 1.44
TNFAIP2-205ENST00000559406 ZC3H13Q5T200 1668 aaKnown RBP24.07■■□□□ 1.44
TNFAIP2-205ENST00000559406 KANK1Q14678 1352 aa24.07■■□□□ 1.44
TNFAIP2-205ENST00000559406 CAMSAP1Q5T5Y3 1602 aa24.05■■□□□ 1.44
TNFAIP2-205ENST00000559406 PKD2Q13563 968 aa24.03■■□□□ 1.44
TNFAIP2-205ENST00000559406 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
TNFAIP2-205ENST00000559406 WASHC2CQ9Y4E1 1318 aa24.03■■□□□ 1.44
TNFAIP2-205ENST00000559406 FER1L4A9Z1Z3 1794 aa24.02■■□□□ 1.44
TNFAIP2-205ENST00000559406 CFAP65Q6ZU64 1925 aaKnown RBP24.02■■□□□ 1.44
TNFAIP2-205ENST00000559406 CCER1Q8TC90 406 aaPredicted RBP24.01■■□□□ 1.43
TNFAIP2-205ENST00000559406 ADAMTSL3P82987 1691 aa24■■□□□ 1.43
TNFAIP2-205ENST00000559406 MADDQ8WXG6 1647 aa23.98■■□□□ 1.43
TNFAIP2-205ENST00000559406 NPATQ14207 1427 aa23.97■■□□□ 1.43
TNFAIP2-205ENST00000559406 PPP6R1Q9UPN7 881 aa23.97■■□□□ 1.43
TNFAIP2-205ENST00000559406 PLA2R1Q13018 1463 aa23.95■■□□□ 1.42
TNFAIP2-205ENST00000559406 MROH2AA6NES4 1674 aa23.94■■□□□ 1.42
TNFAIP2-205ENST00000559406 SPHKAPQ2M3C7 1700 aa23.94■■□□□ 1.42
TNFAIP2-205ENST00000559406 ANKRD30BQ9BXX2 1392 aa23.94■■□□□ 1.42
TNFAIP2-205ENST00000559406 ARHGAP31Q2M1Z3 1444 aa23.93■■□□□ 1.42
TNFAIP2-205ENST00000559406 RIMS1Q86UR5 1692 aaKnown RBP23.93■■□□□ 1.42
TNFAIP2-205ENST00000559406 C3P01024 1663 aa23.9■■□□□ 1.42
TNFAIP2-205ENST00000559406 PREX1Q8TCU6 1659 aa23.9■■□□□ 1.42
TNFAIP2-205ENST00000559406 RPRD2Q5VT52 1461 aaKnown RBP23.9■■□□□ 1.42
TNFAIP2-205ENST00000559406 ZMYM3Q14202 1370 aa23.89■■□□□ 1.42
TNFAIP2-205ENST00000559406 CNTLNQ9NXG0 1405 aa23.89■■□□□ 1.41
TNFAIP2-205ENST00000559406 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
TNFAIP2-205ENST00000559406 PTPRTO14522 1441 aa23.88■■□□□ 1.41
TNFAIP2-205ENST00000559406 FBXO31Q5XUX0 539 aaPredicted RBP23.87■■□□□ 1.41
TNFAIP2-205ENST00000559406 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
TNFAIP2-205ENST00000559406 SYNMO15061 1565 aa23.86■■□□□ 1.41
TNFAIP2-205ENST00000559406 NOS1P29475 1434 aa23.86■■□□□ 1.41
TNFAIP2-205ENST00000559406 TRPM2O94759 1503 aa23.85■■□□□ 1.41
TNFAIP2-205ENST00000559406 UGGT1Q9NYU2 1555 aa23.85■■□□□ 1.41
TNFAIP2-205ENST00000559406 CLSPNQ9HAW4 1339 aa23.85■■□□□ 1.41
TNFAIP2-205ENST00000559406 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
TNFAIP2-205ENST00000559406 CEBPAP49715 358 aaPredicted RBP23.84■■□□□ 1.41
TNFAIP2-205ENST00000559406 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
TNFAIP2-205ENST00000559406 SPATA31D1Q6ZQQ2 1576 aa23.83■■□□□ 1.41
TNFAIP2-205ENST00000559406 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
TNFAIP2-205ENST00000559406 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
TNFAIP2-205ENST00000559406 KDM4FA0A1W2PPD8 638 aa23.78■■□□□ 1.4
TNFAIP2-205ENST00000559406 PLPPR3Q6T4P5 718 aa23.77■■□□□ 1.4
TNFAIP2-205ENST00000559406 CCDC144AA2RUR9 1427 aa23.76■■□□□ 1.39
TNFAIP2-205ENST00000559406 PTPRMP28827 1452 aa23.75■■□□□ 1.39
TNFAIP2-205ENST00000559406 KIF1BO60333 1816 aa23.72■■□□□ 1.39
TNFAIP2-205ENST00000559406 MYO5BQ9ULV0 1848 aa23.71■■□□□ 1.39
TNFAIP2-205ENST00000559406 TNRQ92752 1358 aa23.7■■□□□ 1.38
TNFAIP2-205ENST00000559406 IDI1Q13907 227 aa23.7■■□□□ 1.38
TNFAIP2-205ENST00000559406 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
TNFAIP2-205ENST00000559406 TMEM131LA2VDJ0 1609 aa23.66■■□□□ 1.38
TNFAIP2-205ENST00000559406 ADGRB3O60242 1522 aa23.66■■□□□ 1.38
TNFAIP2-205ENST00000559406 MYO3AQ8NEV4 1616 aa23.65■■□□□ 1.38
TNFAIP2-205ENST00000559406 SLC52A1Q9NWF4 448 aa23.64■■□□□ 1.37
TNFAIP2-205ENST00000559406 SETD1BQ9UPS6 1966 aaKnown RBP23.62■■□□□ 1.37
TNFAIP2-205ENST00000559406 NEURL4Q96JN8 1562 aa23.61■■□□□ 1.37
TNFAIP2-205ENST00000559406 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
TNFAIP2-205ENST00000559406 UBR1Q8IWV7 1749 aa23.61■■□□□ 1.37
TNFAIP2-205ENST00000559406 L3MBTL2Q969R5 705 aa23.6■■□□□ 1.37
TNFAIP2-205ENST00000559406 TONSLQ96HA7 1378 aa23.6■■□□□ 1.37
TNFAIP2-205ENST00000559406 CHGAP10645 457 aaKnown RBP23.59■■□□□ 1.37
TNFAIP2-205ENST00000559406 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
TNFAIP2-205ENST00000559406 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
TNFAIP2-205ENST00000559406 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.36
TNFAIP2-205ENST00000559406 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
TNFAIP2-205ENST00000559406 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
TNFAIP2-205ENST00000559406 PPLO60437 1756 aa23.55■■□□□ 1.36
TNFAIP2-205ENST00000559406 CEP170BQ9Y4F5 1589 aaPredicted RBP23.55■■□□□ 1.36
TNFAIP2-205ENST00000559406 NEXMIFQ5QGS0 1516 aa23.53■■□□□ 1.36
TNFAIP2-205ENST00000559406 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.36
TNFAIP2-205ENST00000559406 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
TNFAIP2-205ENST00000559406 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
TNFAIP2-205ENST00000559406 PPP1R15AO75807 674 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP2-205ENST00000559406 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP2-205ENST00000559406 STAG3Q9UJ98 1225 aa23.49■■□□□ 1.35
TNFAIP2-205ENST00000559406 KDM2AQ9Y2K7 1162 aa23.48■■□□□ 1.35
TNFAIP2-205ENST00000559406 UHRF1BP1Q6BDS2 1440 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms