RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NUP155O75694 1391 aa26.72■■□□□ 1.87
CLPX-203ENST00000558958 KDM5DQ9BY66 1539 aa26.71■■□□□ 1.87
CLPX-203ENST00000558958 DEPDC5O75140 1603 aa26.71■■□□□ 1.87
CLPX-203ENST00000558958 AGLP35573 1532 aa26.7■■□□□ 1.87
CLPX-203ENST00000558958 RNF17Q9BXT8 1623 aaKnown RBP26.69■■□□□ 1.86
CLPX-203ENST00000558958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.68■■□□□ 1.86
CLPX-203ENST00000558958 PZPP20742 1482 aa26.68■■□□□ 1.86
CLPX-203ENST00000558958 MROH1Q8NDA8 1641 aa26.67■■□□□ 1.86
CLPX-203ENST00000558958 CCER1Q8TC90 406 aaPredicted RBP26.67■■□□□ 1.86
CLPX-203ENST00000558958 MPHOSPH9Q99550 1183 aa26.67■■□□□ 1.86
CLPX-203ENST00000558958 PRDM15P57071 1507 aaPredicted RBP26.66■■□□□ 1.86
CLPX-203ENST00000558958 SIGLEC1Q9BZZ2 1709 aa26.66■■□□□ 1.86
CLPX-203ENST00000558958 GGT6Q6P531 493 aa26.63■■□□□ 1.85
CLPX-203ENST00000558958 SLC4A1APQ9BWU0 796 aaKnown RBP26.63■■□□□ 1.85
CLPX-203ENST00000558958 FAM135AQ9P2D6 1515 aa26.63■■□□□ 1.85
CLPX-203ENST00000558958 IQGAP3Q86VI3 1631 aa26.63■■□□□ 1.85
CLPX-203ENST00000558958 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
CLPX-203ENST00000558958 KANK1Q14678 1352 aa26.62■■□□□ 1.85
CLPX-203ENST00000558958 ARID4BQ4LE39 1312 aaPredicted RBP26.56■■□□□ 1.84
CLPX-203ENST00000558958 PKD2Q13563 968 aa26.55■■□□□ 1.84
CLPX-203ENST00000558958 CLSPNQ9HAW4 1339 aa26.54■■□□□ 1.84
CLPX-203ENST00000558958 LMTK2Q8IWU2 1503 aa26.54■■□□□ 1.84
CLPX-203ENST00000558958 PPP6R1Q9UPN7 881 aa26.54■■□□□ 1.84
CLPX-203ENST00000558958 WASHC2CQ9Y4E1 1318 aa26.52■■□□□ 1.84
CLPX-203ENST00000558958 FOXD1Q16676 465 aa26.51■■□□□ 1.83
CLPX-203ENST00000558958 ABCC3O15438 1527 aa26.51■■□□□ 1.83
CLPX-203ENST00000558958 TET3O43151 1660 aa26.5■■□□□ 1.83
CLPX-203ENST00000558958 MLECQ14165 292 aa26.5■■□□□ 1.83
CLPX-203ENST00000558958 CEP152O94986 1710 aa26.48■■□□□ 1.83
CLPX-203ENST00000558958 ZC3H13Q5T200 1668 aaKnown RBP26.47■■□□□ 1.83
CLPX-203ENST00000558958 EFCAB6Q5THR3 1501 aa26.45■■□□□ 1.82
CLPX-203ENST00000558958 ANKRD30BQ9BXX2 1392 aa26.45■■□□□ 1.82
CLPX-203ENST00000558958 E9PCH4 1651 aa26.43■■□□□ 1.82
CLPX-203ENST00000558958 CAMSAP1Q5T5Y3 1602 aa26.41■■□□□ 1.82
CLPX-203ENST00000558958 ARHGAP31Q2M1Z3 1444 aa26.4■■□□□ 1.82
CLPX-203ENST00000558958 RPRD2Q5VT52 1461 aaKnown RBP26.39■■□□□ 1.82
CLPX-203ENST00000558958 NPATQ14207 1427 aa26.39■■□□□ 1.81
CLPX-203ENST00000558958 CLTCQ00610 1675 aaKnown RBP26.38■■□□□ 1.81
CLPX-203ENST00000558958 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
CLPX-203ENST00000558958 PLA2R1Q13018 1463 aa26.37■■□□□ 1.81
CLPX-203ENST00000558958 SIN3AQ96ST3 1273 aa26.36■■□□□ 1.81
CLPX-203ENST00000558958 CNTLNQ9NXG0 1405 aa26.36■■□□□ 1.81
CLPX-203ENST00000558958 PTPRTO14522 1441 aa26.35■■□□□ 1.81
CLPX-203ENST00000558958 ZMYM3Q14202 1370 aa26.31■■□□□ 1.8
CLPX-203ENST00000558958 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
CLPX-203ENST00000558958 SPHKAPQ2M3C7 1700 aa26.3■■□□□ 1.8
CLPX-203ENST00000558958 TRPM2O94759 1503 aa26.29■■□□□ 1.8
CLPX-203ENST00000558958 FER1L4A9Z1Z3 1794 aa26.28■■□□□ 1.8
CLPX-203ENST00000558958 NOS1P29475 1434 aa26.28■■□□□ 1.8
CLPX-203ENST00000558958 MROH2AA6NES4 1674 aa26.28■■□□□ 1.8
CLPX-203ENST00000558958 ADAMTSL3P82987 1691 aa26.27■■□□□ 1.8
CLPX-203ENST00000558958 ZEB1P37275 1124 aaPredicted RBP26.27■■□□□ 1.8
CLPX-203ENST00000558958 CCDC144AA2RUR9 1427 aa26.27■■□□□ 1.8
CLPX-203ENST00000558958 MADDQ8WXG6 1647 aa26.25■■□□□ 1.79
CLPX-203ENST00000558958 FBXO31Q5XUX0 539 aaPredicted RBP26.24■■□□□ 1.79
CLPX-203ENST00000558958 CFAP65Q6ZU64 1925 aaKnown RBP26.24■■□□□ 1.79
CLPX-203ENST00000558958 PREX1Q8TCU6 1659 aa26.23■■□□□ 1.79
CLPX-203ENST00000558958 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
CLPX-203ENST00000558958 SYNMO15061 1565 aa26.2■■□□□ 1.78
CLPX-203ENST00000558958 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
CLPX-203ENST00000558958 CLTCL1P53675 1640 aa26.19■■□□□ 1.78
CLPX-203ENST00000558958 TIMELESSQ9UNS1 1208 aa26.19■■□□□ 1.78
CLPX-203ENST00000558958 UGGT1Q9NYU2 1555 aa26.18■■□□□ 1.78
CLPX-203ENST00000558958 RIMS1Q86UR5 1692 aaKnown RBP26.17■■□□□ 1.78
CLPX-203ENST00000558958 C3P01024 1663 aa26.17■■□□□ 1.78
CLPX-203ENST00000558958 CEBPAP49715 358 aaPredicted RBP26.17■■□□□ 1.78
CLPX-203ENST00000558958 TONSLQ96HA7 1378 aa26.15■■□□□ 1.78
CLPX-203ENST00000558958 SLC52A1Q9NWF4 448 aa26.15■■□□□ 1.78
CLPX-203ENST00000558958 PIK3C2BO00750 1634 aa26.14■■□□□ 1.77
CLPX-203ENST00000558958 IDI1Q13907 227 aa26.11■■□□□ 1.77
CLPX-203ENST00000558958 SPATA31E1Q6ZUB1 1445 aa26.11■■□□□ 1.77
CLPX-203ENST00000558958 TNRQ92752 1358 aa26.11■■□□□ 1.77
CLPX-203ENST00000558958 L3MBTL2Q969R5 705 aa26.1■■□□□ 1.77
CLPX-203ENST00000558958 NEURL4Q96JN8 1562 aa26.08■■□□□ 1.77
CLPX-203ENST00000558958 PTPRMP28827 1452 aa26.06■■□□□ 1.76
CLPX-203ENST00000558958 PLPPR3Q6T4P5 718 aa26.06■■□□□ 1.76
CLPX-203ENST00000558958 KIF1BO60333 1816 aa26.06■■□□□ 1.76
CLPX-203ENST00000558958 RGL3Q3MIN7 710 aa26.05■■□□□ 1.76
CLPX-203ENST00000558958 ADGRB3O60242 1522 aa26.05■■□□□ 1.76
CLPX-203ENST00000558958 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
CLPX-203ENST00000558958 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
CLPX-203ENST00000558958 CHGAP10645 457 aaKnown RBP26.02■■□□□ 1.76
CLPX-203ENST00000558958 NLRP1Q9C000 1473 aa26■■□□□ 1.75
CLPX-203ENST00000558958 TMEM131LA2VDJ0 1609 aa25.99■■□□□ 1.75
CLPX-203ENST00000558958 DCAF11Q8TEB1 546 aa25.98■■□□□ 1.75
CLPX-203ENST00000558958 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
CLPX-203ENST00000558958 STAG3Q9UJ98 1225 aa25.95■■□□□ 1.74
CLPX-203ENST00000558958 A2ML1A8K2U0 1454 aa25.94■■□□□ 1.74
CLPX-203ENST00000558958 RPGRIP1LQ68CZ1 1315 aa25.94■■□□□ 1.74
CLPX-203ENST00000558958 STAC3Q96MF2 364 aa25.93■■□□□ 1.74
CLPX-203ENST00000558958 MYO3AQ8NEV4 1616 aa25.93■■□□□ 1.74
CLPX-203ENST00000558958 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
CLPX-203ENST00000558958 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
CLPX-203ENST00000558958 MYO5BQ9ULV0 1848 aa25.92■■□□□ 1.74
CLPX-203ENST00000558958 SETD1BQ9UPS6 1966 aaKnown RBP25.92■■□□□ 1.74
CLPX-203ENST00000558958 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
CLPX-203ENST00000558958 UBR1Q8IWV7 1749 aa25.89■■□□□ 1.73
CLPX-203ENST00000558958 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
CLPX-203ENST00000558958 NBPF8Q3BBV2 869 aa25.88■■□□□ 1.73
CLPX-203ENST00000558958 NEXMIFQ5QGS0 1516 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms