RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MROH1Q8NDA8 1641 aa26.37■■□□□ 1.81
TPM1-214ENST00000558544 CLTCQ00610 1675 aaKnown RBP26.36■■□□□ 1.81
TPM1-214ENST00000558544 GGT6Q6P531 493 aa26.36■■□□□ 1.81
TPM1-214ENST00000558544 NAIPQ13075 1403 aa26.33■■□□□ 1.81
TPM1-214ENST00000558544 CEP152O94986 1710 aa26.33■■□□□ 1.8
TPM1-214ENST00000558544 PRDM15P57071 1507 aaPredicted RBP26.32■■□□□ 1.8
TPM1-214ENST00000558544 HFM1A2PYH4 1435 aa26.32■■□□□ 1.8
TPM1-214ENST00000558544 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
TPM1-214ENST00000558544 ZC3H13Q5T200 1668 aaKnown RBP26.3■■□□□ 1.8
TPM1-214ENST00000558544 UNC13BO14795 1591 aa26.3■■□□□ 1.8
TPM1-214ENST00000558544 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
TPM1-214ENST00000558544 FAM135AQ9P2D6 1515 aa26.27■■□□□ 1.8
TPM1-214ENST00000558544 C3P01024 1663 aa26.27■■□□□ 1.8
TPM1-214ENST00000558544 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
TPM1-214ENST00000558544 PTPRMP28827 1452 aa26.26■■□□□ 1.79
TPM1-214ENST00000558544 CNTLNQ9NXG0 1405 aa26.25■■□□□ 1.79
TPM1-214ENST00000558544 ABCC3O15438 1527 aa26.24■■□□□ 1.79
TPM1-214ENST00000558544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.791e-6■■■□□ 19
TPM1-214ENST00000558544 CAMSAP1Q5T5Y3 1602 aa26.23■■□□□ 1.79
TPM1-214ENST00000558544 PPP6R1Q9UPN7 881 aa26.22■■□□□ 1.79
TPM1-214ENST00000558544 VWDEQ8N2E2 1590 aa26.22■■□□□ 1.79
TPM1-214ENST00000558544 WASHC2CQ9Y4E1 1318 aa26.21■■□□□ 1.79
TPM1-214ENST00000558544 KANK1Q14678 1352 aa26.19■■□□□ 1.78
TPM1-214ENST00000558544 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
TPM1-214ENST00000558544 IQGAP3Q86VI3 1631 aa26.18■■□□□ 1.78
TPM1-214ENST00000558544 TRIM26Q12899 539 aaPredicted RBP26.17■■□□□ 1.78
TPM1-214ENST00000558544 SETD5Q9C0A6 1442 aa26.16■■□□□ 1.78
TPM1-214ENST00000558544 CFAP65Q6ZU64 1925 aaKnown RBP26.15■■□□□ 1.78
TPM1-214ENST00000558544 LMTK2Q8IWU2 1503 aa26.15■■□□□ 1.78
TPM1-214ENST00000558544 ZMYM3Q14202 1370 aa26.15■■□□□ 1.78
TPM1-214ENST00000558544 TET3O43151 1660 aa26.14■■□□□ 1.78
TPM1-214ENST00000558544 CEBPAP49715 358 aaPredicted RBP26.14■■□□□ 1.78
TPM1-214ENST00000558544 NUP155O75694 1391 aa26.11■■□□□ 1.77
TPM1-214ENST00000558544 EFCAB6Q5THR3 1501 aa26.11■■□□□ 1.77
TPM1-214ENST00000558544 PZPP20742 1482 aa26.1■■□□□ 1.77
TPM1-214ENST00000558544 RAB3GAP2Q9H2M9 1393 aa26.1■■□□□ 1.77
TPM1-214ENST00000558544 AEBP2Q6ZN18 517 aaPredicted RBP26.07■■□□□ 1.76
TPM1-214ENST00000558544 E9PCH4 1651 aa26.07■■□□□ 1.76
TPM1-214ENST00000558544 PREX1Q8TCU6 1659 aa26.07■■□□□ 1.76
TPM1-214ENST00000558544 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
TPM1-214ENST00000558544 SETD1BQ9UPS6 1966 aaKnown RBP26.04■■□□□ 1.76
TPM1-214ENST00000558544 NPATQ14207 1427 aa26.03■■□□□ 1.76
TPM1-214ENST00000558544 ARHGAP31Q2M1Z3 1444 aa26.03■■□□□ 1.76
TPM1-214ENST00000558544 SPATA31D1Q6ZQQ2 1576 aa26.01■■□□□ 1.75
TPM1-214ENST00000558544 MYO3AQ8NEV4 1616 aa26■■□□□ 1.75
TPM1-214ENST00000558544 ERVK-7P63135 1459 aa26■■□□□ 1.75
TPM1-214ENST00000558544 FBXO31Q5XUX0 539 aaPredicted RBP26■■□□□ 1.75
TPM1-214ENST00000558544 RPRD2Q5VT52 1461 aaKnown RBP25.98■■□□□ 1.75
TPM1-214ENST00000558544 SPHKAPQ2M3C7 1700 aa25.96■■□□□ 1.75
TPM1-214ENST00000558544 TNRQ92752 1358 aa25.94■■□□□ 1.74
TPM1-214ENST00000558544 SYNMO15061 1565 aa25.93■■□□□ 1.74
TPM1-214ENST00000558544 ZNF142P52746 1687 aaPredicted RBP25.93■■□□□ 1.74
TPM1-214ENST00000558544 ACIN1Q9UKV3 1341 aaKnown RBP25.93■■□□□ 1.74
TPM1-214ENST00000558544 SLC4A1APQ9BWU0 796 aaKnown RBP25.92■■□□□ 1.74
TPM1-214ENST00000558544 UHRF1BP1Q6BDS2 1440 aa25.91■■□□□ 1.74
TPM1-214ENST00000558544 HRCP23327 699 aa25.91■■□□□ 1.74
TPM1-214ENST00000558544 NOS1P29475 1434 aa25.9■■□□□ 1.74
TPM1-214ENST00000558544 CEP170BQ9Y4F5 1589 aaPredicted RBP25.89■■□□□ 1.74
TPM1-214ENST00000558544 LMTK3Q96Q04 1460 aa25.89■■□□□ 1.74
TPM1-214ENST00000558544 PKD2Q13563 968 aa25.87■■□□□ 1.73
TPM1-214ENST00000558544 PCGF6Q9BYE7 350 aa25.87■■□□□ 1.73
TPM1-214ENST00000558544 MPHOSPH9Q99550 1183 aa25.86■■□□□ 1.73
TPM1-214ENST00000558544 PIK3C2BO00750 1634 aa25.85■■□□□ 1.73
TPM1-214ENST00000558544 NLRP1Q9C000 1473 aa25.85■■□□□ 1.73
TPM1-214ENST00000558544 UGGT1Q9NYU2 1555 aa25.84■■□□□ 1.73
TPM1-214ENST00000558544 A2ML1A8K2U0 1454 aa25.83■■□□□ 1.72
TPM1-214ENST00000558544 UBR1Q8IWV7 1749 aa25.82■■□□□ 1.72
TPM1-214ENST00000558544 TRPM2O94759 1503 aa25.82■■□□□ 1.72
TPM1-214ENST00000558544 FOXD1Q16676 465 aa25.81■■□□□ 1.72
TPM1-214ENST00000558544 MYO5BQ9ULV0 1848 aa25.8■■□□□ 1.72
TPM1-214ENST00000558544 PTPRTO14522 1441 aa25.8■■□□□ 1.72
TPM1-214ENST00000558544 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
TPM1-214ENST00000558544 PLA2R1Q13018 1463 aa25.77■■□□□ 1.72
TPM1-214ENST00000558544 KDM5AP29375 1690 aaKnown RBP25.76■■□□□ 1.71
TPM1-214ENST00000558544 ADGRB3O60242 1522 aa25.75■■□□□ 1.71
TPM1-214ENST00000558544 KIF1BO60333 1816 aa25.74■■□□□ 1.71
TPM1-214ENST00000558544 HSPA2P54652 639 aa25.74■■□□□ 1.71
TPM1-214ENST00000558544 IDI1Q13907 227 aa25.74■■□□□ 1.71
TPM1-214ENST00000558544 SLC52A1Q9NWF4 448 aa25.73■■□□□ 1.71
TPM1-214ENST00000558544 TMEM131LA2VDJ0 1609 aa25.72■■□□□ 1.71
TPM1-214ENST00000558544 POLR1AO95602 1720 aaPredicted RBP25.69■■□□□ 1.7
TPM1-214ENST00000558544 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
TPM1-214ENST00000558544 STAG3Q9UJ98 1225 aa25.68■■□□□ 1.7
TPM1-214ENST00000558544 CCDC144AA2RUR9 1427 aa25.65■■□□□ 1.7
TPM1-214ENST00000558544 DHX57Q6P158 1386 aaKnown RBP25.64■■□□□ 1.7
TPM1-214ENST00000558544 CHGAP10645 457 aaKnown RBP25.64■■□□□ 1.69
TPM1-214ENST00000558544 THEMISQ8N1K5 641 aaPredicted RBP25.64■■□□□ 1.69
TPM1-214ENST00000558544 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
TPM1-214ENST00000558544 SLIT1O75093 1534 aa25.61■■□□□ 1.69
TPM1-214ENST00000558544 ARHGAP23Q9P227 1491 aa25.59■■□□□ 1.69
TPM1-214ENST00000558544 TMEM2Q9UHN6 1383 aa25.57■■□□□ 1.68
TPM1-214ENST00000558544 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
TPM1-214ENST00000558544 NCKAP5LQ9HCH0 1330 aa25.54■■□□□ 1.68
TPM1-214ENST00000558544 PPLO60437 1756 aa25.53■■□□□ 1.68
TPM1-214ENST00000558544 SCAF11Q99590 1463 aaKnown RBP25.53■■□□□ 1.68
TPM1-214ENST00000558544 ZFYVE9O95405 1425 aa25.53■■□□□ 1.68
TPM1-214ENST00000558544 RIMS2Q9UQ26 1411 aa25.53■■□□□ 1.68
TPM1-214ENST00000558544 ZNF326Q5BKZ1 582 aaKnown RBP25.52■■□□□ 1.68
TPM1-214ENST00000558544 IFT172Q9UG01 1749 aa25.52■■□□□ 1.68
TPM1-214ENST00000558544 IQGAP1P46940 1657 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms