RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SHANK2Q9UPX8 1470 aa19.27■□□□□ 0.67
SLIRP-211ENST00000557623 ESF1Q9H501 851 aaKnown RBP19.25■□□□□ 0.67
SLIRP-211ENST00000557623 ABCC5O15440 1437 aa19.25■□□□□ 0.67
SLIRP-211ENST00000557623 DAPK1P53355 1430 aa19.25■□□□□ 0.67
SLIRP-211ENST00000557623 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
SLIRP-211ENST00000557623 MROH2AA6NES4 1674 aa19.22■□□□□ 0.67
SLIRP-211ENST00000557623 FAM50AQ14320 339 aaKnown RBP19.22■□□□□ 0.67
SLIRP-211ENST00000557623 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
SLIRP-211ENST00000557623 C3P01024 1663 aa19.2■□□□□ 0.66
SLIRP-211ENST00000557623 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
SLIRP-211ENST00000557623 DUOX2Q9NRD8 1548 aa19.2■□□□□ 0.66
SLIRP-211ENST00000557623 CLTCQ00610 1675 aaKnown RBP19.19■□□□□ 0.66
SLIRP-211ENST00000557623 GGT6Q6P531 493 aa19.18■□□□□ 0.66
SLIRP-211ENST00000557623 KIF3BO15066 747 aa19.17■□□□□ 0.66
SLIRP-211ENST00000557623 RNF39Q9H2S5 420 aa19.17■□□□□ 0.66
SLIRP-211ENST00000557623 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
SLIRP-211ENST00000557623 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
SLIRP-211ENST00000557623 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
SLIRP-211ENST00000557623 ANKRD30AQ9BXX3 1397 aa19.16■□□□□ 0.66
SLIRP-211ENST00000557623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.66
SLIRP-211ENST00000557623 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
SLIRP-211ENST00000557623 RNF17Q9BXT8 1623 aaKnown RBP19.14■□□□□ 0.66
SLIRP-211ENST00000557623 PREX1Q8TCU6 1659 aa19.14■□□□□ 0.65
SLIRP-211ENST00000557623 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
SLIRP-211ENST00000557623 ERBINQ96RT1 1412 aa19.12■□□□□ 0.65
SLIRP-211ENST00000557623 CEBPAP49715 358 aaPredicted RBP19.12■□□□□ 0.65
SLIRP-211ENST00000557623 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
SLIRP-211ENST00000557623 CHIC2Q9UKJ5 165 aa19.12■□□□□ 0.65
SLIRP-211ENST00000557623 ZMYM3Q14202 1370 aa19.11■□□□□ 0.65
SLIRP-211ENST00000557623 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
SLIRP-211ENST00000557623 KDM5DQ9BY66 1539 aa19.1■□□□□ 0.65
SLIRP-211ENST00000557623 NCOA1Q15788 1441 aa19.1■□□□□ 0.65
SLIRP-211ENST00000557623 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
SLIRP-211ENST00000557623 LMTK3Q96Q04 1460 aa19.08■□□□□ 0.64
SLIRP-211ENST00000557623 WASHC2CQ9Y4E1 1318 aa19.07■□□□□ 0.64
SLIRP-211ENST00000557623 NPATQ14207 1427 aa19.07■□□□□ 0.64
SLIRP-211ENST00000557623 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
SLIRP-211ENST00000557623 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
SLIRP-211ENST00000557623 CEP152O94986 1710 aa19.04■□□□□ 0.64
SLIRP-211ENST00000557623 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
SLIRP-211ENST00000557623 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
SLIRP-211ENST00000557623 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
SLIRP-211ENST00000557623 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
SLIRP-211ENST00000557623 ABCC3O15438 1527 aa19.02■□□□□ 0.64
SLIRP-211ENST00000557623 ITGAEP38570 1179 aa19.01■□□□□ 0.63
SLIRP-211ENST00000557623 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
SLIRP-211ENST00000557623 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
SLIRP-211ENST00000557623 PZPP20742 1482 aa19■□□□□ 0.63
SLIRP-211ENST00000557623 KANK1Q14678 1352 aa18.99■□□□□ 0.63
SLIRP-211ENST00000557623 C1QBPQ07021 282 aaKnown RBP18.98■□□□□ 0.63
SLIRP-211ENST00000557623 MYO3AQ8NEV4 1616 aa18.98■□□□□ 0.63
SLIRP-211ENST00000557623 ZNF142P52746 1687 aaPredicted RBP18.97■□□□□ 0.63
SLIRP-211ENST00000557623 CFAP65Q6ZU64 1925 aaKnown RBP18.96■□□□□ 0.63
SLIRP-211ENST00000557623 U3KPZ7 1027 aaPredicted RBP18.96■□□□□ 0.63
SLIRP-211ENST00000557623 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
SLIRP-211ENST00000557623 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
SLIRP-211ENST00000557623 HSPA2P54652 639 aa18.94■□□□□ 0.62
SLIRP-211ENST00000557623 UNC13BO14795 1591 aa18.93■□□□□ 0.62
SLIRP-211ENST00000557623 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
SLIRP-211ENST00000557623 CEP170BQ9Y4F5 1589 aaPredicted RBP18.92■□□□□ 0.62
SLIRP-211ENST00000557623 TNRQ92752 1358 aa18.92■□□□□ 0.62
SLIRP-211ENST00000557623 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
SLIRP-211ENST00000557623 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
SLIRP-211ENST00000557623 SPATA31D1Q6ZQQ2 1576 aa18.91■□□□□ 0.62
SLIRP-211ENST00000557623 FBXO31Q5XUX0 539 aaPredicted RBP18.91■□□□□ 0.62
SLIRP-211ENST00000557623 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
SLIRP-211ENST00000557623 A2ML1A8K2U0 1454 aa18.88■□□□□ 0.61
SLIRP-211ENST00000557623 NLRP1Q9C000 1473 aa18.88■□□□□ 0.61
SLIRP-211ENST00000557623 TET3O43151 1660 aa18.88■□□□□ 0.61
SLIRP-211ENST00000557623 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
SLIRP-211ENST00000557623 CACNB1Q02641 598 aaPredicted RBP18.87■□□□□ 0.61
SLIRP-211ENST00000557623 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
SLIRP-211ENST00000557623 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
SLIRP-211ENST00000557623 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
SLIRP-211ENST00000557623 NAIPQ13075 1403 aa18.83■□□□□ 0.61
SLIRP-211ENST00000557623 HFM1A2PYH4 1435 aa18.83■□□□□ 0.6
SLIRP-211ENST00000557623 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
SLIRP-211ENST00000557623 UGGT1Q9NYU2 1555 aa18.81■□□□□ 0.6
SLIRP-211ENST00000557623 NUP155O75694 1391 aa18.81■□□□□ 0.6
SLIRP-211ENST00000557623 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
SLIRP-211ENST00000557623 E9PCH4 1651 aa18.79■□□□□ 0.6
SLIRP-211ENST00000557623 ZBTB22O15209 634 aa18.79■□□□□ 0.6
SLIRP-211ENST00000557623 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
SLIRP-211ENST00000557623 UBR1Q8IWV7 1749 aa18.78■□□□□ 0.6
SLIRP-211ENST00000557623 THEMISQ8N1K5 641 aaPredicted RBP18.78■□□□□ 0.6
SLIRP-211ENST00000557623 NOS1P29475 1434 aa18.77■□□□□ 0.6
SLIRP-211ENST00000557623 KDM5AP29375 1690 aaKnown RBP18.77■□□□□ 0.6
SLIRP-211ENST00000557623 PKD2Q13563 968 aa18.77■□□□□ 0.6
SLIRP-211ENST00000557623 PTPRTO14522 1441 aa18.76■□□□□ 0.59
SLIRP-211ENST00000557623 SYNMO15061 1565 aa18.76■□□□□ 0.59
SLIRP-211ENST00000557623 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
SLIRP-211ENST00000557623 NCKAP5LQ9HCH0 1330 aa18.73■□□□□ 0.59
SLIRP-211ENST00000557623 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
SLIRP-211ENST00000557623 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
SLIRP-211ENST00000557623 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
SLIRP-211ENST00000557623 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
SLIRP-211ENST00000557623 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
SLIRP-211ENST00000557623 ACIN1Q9UKV3 1341 aaKnown RBP18.7■□□□□ 0.58
SLIRP-211ENST00000557623 IDI1Q13907 227 aa18.69■□□□□ 0.58
SLIRP-211ENST00000557623 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms