RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.27
ABCD4-227ENST00000557554 THEMISQ8N1K5 641 aaPredicted RBP16.76■□□□□ 0.27
ABCD4-227ENST00000557554 TNRQ92752 1358 aa16.76■□□□□ 0.27
ABCD4-227ENST00000557554 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
ABCD4-227ENST00000557554 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-227ENST00000557554 DEPDC5O75140 1603 aa16.74■□□□□ 0.27
ABCD4-227ENST00000557554 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
ABCD4-227ENST00000557554 RNF17Q9BXT8 1623 aaKnown RBP16.7■□□□□ 0.26
ABCD4-227ENST00000557554 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
ABCD4-227ENST00000557554 ADGBQ8N7X0 1667 aa16.69■□□□□ 0.26
ABCD4-227ENST00000557554 PZPP20742 1482 aa16.69■□□□□ 0.26
ABCD4-227ENST00000557554 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
ABCD4-227ENST00000557554 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
ABCD4-227ENST00000557554 CCDC18Q5T9S5 1454 aa16.68■□□□□ 0.26
ABCD4-227ENST00000557554 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
ABCD4-227ENST00000557554 DHX29Q7Z478 1369 aaKnown RBP16.67■□□□□ 0.26
ABCD4-227ENST00000557554 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
ABCD4-227ENST00000557554 UGGT1Q9NYU2 1555 aa16.67■□□□□ 0.26
ABCD4-227ENST00000557554 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
ABCD4-227ENST00000557554 SYNMO15061 1565 aa16.65■□□□□ 0.26
ABCD4-227ENST00000557554 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
ABCD4-227ENST00000557554 FAM135BQ49AJ0 1406 aa16.64■□□□□ 0.25
ABCD4-227ENST00000557554 XIRP1Q702N8 1843 aaKnown RBP16.64■□□□□ 0.25
ABCD4-227ENST00000557554 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
ABCD4-227ENST00000557554 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
ABCD4-227ENST00000557554 MBD5Q9P267 1494 aa16.63■□□□□ 0.25
ABCD4-227ENST00000557554 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
ABCD4-227ENST00000557554 KIF3BO15066 747 aa16.62■□□□□ 0.25
ABCD4-227ENST00000557554 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
ABCD4-227ENST00000557554 ZC3H13Q5T200 1668 aaKnown RBP16.61■□□□□ 0.25
ABCD4-227ENST00000557554 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
ABCD4-227ENST00000557554 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
ABCD4-227ENST00000557554 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCD4-227ENST00000557554 CCNB3Q8WWL7 1395 aa16.57■□□□□ 0.24
ABCD4-227ENST00000557554 LTKP29376 864 aa16.55■□□□□ 0.24
ABCD4-227ENST00000557554 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
ABCD4-227ENST00000557554 SRCAPQ6ZRS2 3230 aa16.51■□□□□ 0.23
ABCD4-227ENST00000557554 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
ABCD4-227ENST00000557554 ROBO1Q9Y6N7 1651 aa16.5■□□□□ 0.23
ABCD4-227ENST00000557554 NCOA2Q15596 1464 aa16.49■□□□□ 0.23
ABCD4-227ENST00000557554 ARHGAP23Q9P227 1491 aa16.49■□□□□ 0.23
ABCD4-227ENST00000557554 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
ABCD4-227ENST00000557554 UBR1Q8IWV7 1749 aa16.49■□□□□ 0.23
ABCD4-227ENST00000557554 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
ABCD4-227ENST00000557554 SLIT1O75093 1534 aa16.47■□□□□ 0.23
ABCD4-227ENST00000557554 ERVK-7P63135 1459 aa16.46■□□□□ 0.23
ABCD4-227ENST00000557554 RSPH4AQ5TD94 716 aa16.45■□□□□ 0.22
ABCD4-227ENST00000557554 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
ABCD4-227ENST00000557554 JCADQ9P266 1359 aa16.44■□□□□ 0.22
ABCD4-227ENST00000557554 KCNA6P17658 529 aa16.44■□□□□ 0.22
ABCD4-227ENST00000557554 ABCC3O15438 1527 aa16.44■□□□□ 0.22
ABCD4-227ENST00000557554 MAP3K1Q13233 1512 aa16.44■□□□□ 0.22
ABCD4-227ENST00000557554 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
ABCD4-227ENST00000557554 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
ABCD4-227ENST00000557554 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
ABCD4-227ENST00000557554 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
ABCD4-227ENST00000557554 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
ABCD4-227ENST00000557554 ZNF772Q68DY9 489 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-227ENST00000557554 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-227ENST00000557554 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
ABCD4-227ENST00000557554 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
ABCD4-227ENST00000557554 LRP6O75581 1613 aa16.4■□□□□ 0.22
ABCD4-227ENST00000557554 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
ABCD4-227ENST00000557554 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
ABCD4-227ENST00000557554 TET3O43151 1660 aa16.38■□□□□ 0.21
ABCD4-227ENST00000557554 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
ABCD4-227ENST00000557554 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
ABCD4-227ENST00000557554 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
ABCD4-227ENST00000557554 PRDM15P57071 1507 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-227ENST00000557554 RXRBP28702 533 aa16.36■□□□□ 0.21
ABCD4-227ENST00000557554 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-227ENST00000557554 MROH1Q8NDA8 1641 aa16.36■□□□□ 0.21
ABCD4-227ENST00000557554 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
ABCD4-227ENST00000557554 SLC26A8Q96RN1 970 aa16.35■□□□□ 0.21
ABCD4-227ENST00000557554 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
ABCD4-227ENST00000557554 CDK12Q9NYV4 1490 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-227ENST00000557554 TSPY4P0CV99 314 aa16.34■□□□□ 0.21
ABCD4-227ENST00000557554 TSPY10P0CW01 314 aa16.34■□□□□ 0.21
ABCD4-227ENST00000557554 ARHGAP31Q2M1Z3 1444 aa16.33■□□□□ 0.2
ABCD4-227ENST00000557554 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
ABCD4-227ENST00000557554 ARHGEF5Q12774 1597 aa16.32■□□□□ 0.2
ABCD4-227ENST00000557554 CEP152O94986 1710 aa16.31■□□□□ 0.2
ABCD4-227ENST00000557554 MSH6P52701 1360 aa16.31■□□□□ 0.2
ABCD4-227ENST00000557554 PIK3C2BO00750 1634 aa16.3■□□□□ 0.2
ABCD4-227ENST00000557554 EIF2AK4Q9P2K8 1649 aaKnown RBP16.3■□□□□ 0.2
ABCD4-227ENST00000557554 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
ABCD4-227ENST00000557554 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
ABCD4-227ENST00000557554 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
ABCD4-227ENST00000557554 NWD1Q149M9 1564 aa16.29■□□□□ 0.2
ABCD4-227ENST00000557554 IDI1Q13907 227 aa16.28■□□□□ 0.2
ABCD4-227ENST00000557554 KDM5AP29375 1690 aaKnown RBP16.27■□□□□ 0.19
ABCD4-227ENST00000557554 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
ABCD4-227ENST00000557554 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
ABCD4-227ENST00000557554 EFCAB6Q5THR3 1501 aa16.24■□□□□ 0.19
ABCD4-227ENST00000557554 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
ABCD4-227ENST00000557554 CHD2O14647 1828 aaKnown RBP16.23■□□□□ 0.19
ABCD4-227ENST00000557554 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
ABCD4-227ENST00000557554 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
ABCD4-227ENST00000557554 AFF2P51816 1311 aa16.21■□□□□ 0.19
ABCD4-227ENST00000557554 DIP2AQ14689 1571 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms