RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 ANKRD50Q9ULJ7 1429 aa31.75■■■□□ 2.67
SEC23A-213ENST00000557280 CLTCQ00610 1675 aaKnown RBP31.72■■■□□ 2.67
SEC23A-213ENST00000557280 DEPDC5O75140 1603 aa31.71■■■□□ 2.67
SEC23A-213ENST00000557280 PRDM15P57071 1507 aaPredicted RBP31.7■■■□□ 2.66
SEC23A-213ENST00000557280 NAIPQ13075 1403 aa31.68■■■□□ 2.66
SEC23A-213ENST00000557280 KDM5DQ9BY66 1539 aa31.68■■■□□ 2.66
SEC23A-213ENST00000557280 GCC2Q8IWJ2 1684 aa31.67■■■□□ 2.66
SEC23A-213ENST00000557280 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
SEC23A-213ENST00000557280 PLPPR3Q6T4P5 718 aa31.66■■■□□ 2.66
SEC23A-213ENST00000557280 HFM1A2PYH4 1435 aa31.65■■■□□ 2.66
SEC23A-213ENST00000557280 MROH2AA6NES4 1674 aa31.64■■■□□ 2.66
SEC23A-213ENST00000557280 C3P01024 1663 aa31.64■■■□□ 2.66
SEC23A-213ENST00000557280 CEBPAP49715 358 aaPredicted RBP31.64■■■□□ 2.66
SEC23A-213ENST00000557280 ESF1Q9H501 851 aaKnown RBP31.64■■■□□ 2.66
SEC23A-213ENST00000557280 ABCC3O15438 1527 aa31.64■■■□□ 2.66
SEC23A-213ENST00000557280 FAM135AQ9P2D6 1515 aa31.63■■■□□ 2.65
SEC23A-213ENST00000557280 AEBP2Q6ZN18 517 aaPredicted RBP31.62■■■□□ 2.65
SEC23A-213ENST00000557280 PPP6R1Q9UPN7 881 aa31.62■■■□□ 2.65
SEC23A-213ENST00000557280 CEP152O94986 1710 aa31.61■■■□□ 2.65
SEC23A-213ENST00000557280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.61■■■□□ 2.65
SEC23A-213ENST00000557280 UNC13BO14795 1591 aa31.6■■■□□ 2.65
SEC23A-213ENST00000557280 WASHC2CQ9Y4E1 1318 aa31.59■■■□□ 2.65
SEC23A-213ENST00000557280 ZC3H13Q5T200 1668 aaKnown RBP31.59■■■□□ 2.65
SEC23A-213ENST00000557280 VWDEQ8N2E2 1590 aa31.59■■■□□ 2.65
SEC23A-213ENST00000557280 ZMYM3Q14202 1370 aa31.58■■■□□ 2.65
SEC23A-213ENST00000557280 CAMSAP1Q5T5Y3 1602 aa31.53■■■□□ 2.64
SEC23A-213ENST00000557280 KANK1Q14678 1352 aa31.51■■■□□ 2.63
SEC23A-213ENST00000557280 LMTK2Q8IWU2 1503 aa31.49■■■□□ 2.63
SEC23A-213ENST00000557280 PZPP20742 1482 aa31.48■■■□□ 2.63
SEC23A-213ENST00000557280 IQGAP3Q86VI3 1631 aa31.46■■■□□ 2.63
SEC23A-213ENST00000557280 FBXO31Q5XUX0 539 aaPredicted RBP31.44■■■□□ 2.62
SEC23A-213ENST00000557280 EFCAB6Q5THR3 1501 aa31.43■■■□□ 2.62
SEC23A-213ENST00000557280 NUP155O75694 1391 aa31.43■■■□□ 2.62
SEC23A-213ENST00000557280 NPATQ14207 1427 aa31.41■■■□□ 2.62
SEC23A-213ENST00000557280 SETD5Q9C0A6 1442 aa31.41■■■□□ 2.62
SEC23A-213ENST00000557280 TET3O43151 1660 aa31.4■■■□□ 2.62
SEC23A-213ENST00000557280 ARHGAP31Q2M1Z3 1444 aa31.4■■■□□ 2.62
SEC23A-213ENST00000557280 ERVK-7P63135 1459 aa31.37■■■□□ 2.61
SEC23A-213ENST00000557280 PREX1Q8TCU6 1659 aa31.36■■■□□ 2.61
SEC23A-213ENST00000557280 LMTK3Q96Q04 1460 aa31.36■■■□□ 2.61
SEC23A-213ENST00000557280 SPATA31D1Q6ZQQ2 1576 aa31.35■■■□□ 2.61
SEC23A-213ENST00000557280 RAB3GAP2Q9H2M9 1393 aa31.35■■■□□ 2.61
SEC23A-213ENST00000557280 MYO3AQ8NEV4 1616 aa31.34■■■□□ 2.61
SEC23A-213ENST00000557280 TNRQ92752 1358 aa31.32■■■□□ 2.6
SEC23A-213ENST00000557280 E9PCH4 1651 aa31.32■■■□□ 2.6
SEC23A-213ENST00000557280 TRIM52Q96A61 297 aa31.31■■■□□ 2.6
SEC23A-213ENST00000557280 CFAP65Q6ZU64 1925 aaKnown RBP31.3■■■□□ 2.6
SEC23A-213ENST00000557280 UHRF1BP1Q6BDS2 1440 aa31.29■■■□□ 2.6
SEC23A-213ENST00000557280 TRIM26Q12899 539 aaPredicted RBP31.28■■■□□ 2.6
SEC23A-213ENST00000557280 RPRD2Q5VT52 1461 aaKnown RBP31.27■■■□□ 2.6
SEC23A-213ENST00000557280 SETD1BQ9UPS6 1966 aaKnown RBP31.26■■■□□ 2.6
SEC23A-213ENST00000557280 SYNMO15061 1565 aa31.26■■■□□ 2.59
SEC23A-213ENST00000557280 NOS1P29475 1434 aa31.24■■■□□ 2.59
SEC23A-213ENST00000557280 ZNF142P52746 1687 aaPredicted RBP31.23■■■□□ 2.59
SEC23A-213ENST00000557280 CEP170BQ9Y4F5 1589 aaPredicted RBP31.23■■■□□ 2.59
SEC23A-213ENST00000557280 HSPA2P54652 639 aa31.21■■■□□ 2.59
SEC23A-213ENST00000557280 A2ML1A8K2U0 1454 aa31.18■■■□□ 2.58
SEC23A-213ENST00000557280 NLRP1Q9C000 1473 aa31.17■■■□□ 2.58
SEC23A-213ENST00000557280 SLC4A1APQ9BWU0 796 aaKnown RBP31.16■■■□□ 2.58
SEC23A-213ENST00000557280 UGGT1Q9NYU2 1555 aa31.15■■■□□ 2.58
SEC23A-213ENST00000557280 PKD2Q13563 968 aa31.14■■■□□ 2.58
SEC23A-213ENST00000557280 SPHKAPQ2M3C7 1700 aa31.12■■■□□ 2.57
SEC23A-213ENST00000557280 PIK3C2BO00750 1634 aa31.11■■■□□ 2.57
SEC23A-213ENST00000557280 MPHOSPH9Q99550 1183 aa31.11■■■□□ 2.57
SEC23A-213ENST00000557280 PTPRTO14522 1441 aa31.1■■■□□ 2.57
SEC23A-213ENST00000557280 FOXD1Q16676 465 aa31.1■■■□□ 2.57
SEC23A-213ENST00000557280 HRCP23327 699 aa31.09■■■□□ 2.57
SEC23A-213ENST00000557280 PLA2R1Q13018 1463 aa31.08■■■□□ 2.57
SEC23A-213ENST00000557280 IDI1Q13907 227 aa31.07■■■□□ 2.56
SEC23A-213ENST00000557280 UBR1Q8IWV7 1749 aa31.07■■■□□ 2.56
SEC23A-213ENST00000557280 ACIN1Q9UKV3 1341 aaKnown RBP31.05■■■□□ 2.56
SEC23A-213ENST00000557280 TRPM2O94759 1503 aa31.05■■■□□ 2.56
SEC23A-213ENST00000557280 ADGRB3O60242 1522 aa31.02■■■□□ 2.56
SEC23A-213ENST00000557280 SLC52A1Q9NWF4 448 aa31.01■■■□□ 2.55
SEC23A-213ENST00000557280 CLTCL1P53675 1640 aa31.01■■■□□ 2.55
SEC23A-213ENST00000557280 STRCQ7RTU9 1775 aa30.99■■■□□ 2.55
SEC23A-213ENST00000557280 TMEM131LA2VDJ0 1609 aa30.96■■■□□ 2.55
SEC23A-213ENST00000557280 KDM5AP29375 1690 aaKnown RBP30.96■■■□□ 2.55
SEC23A-213ENST00000557280 MYO5BQ9ULV0 1848 aa30.94■■■□□ 2.54
SEC23A-213ENST00000557280 PCGF6Q9BYE7 350 aa30.94■■■□□ 2.54
SEC23A-213ENST00000557280 THEMISQ8N1K5 641 aaPredicted RBP30.93■■■□□ 2.54
SEC23A-213ENST00000557280 STAG3Q9UJ98 1225 aa30.91■■■□□ 2.54
SEC23A-213ENST00000557280 NCKAP5LQ9HCH0 1330 aa30.91■■■□□ 2.54
SEC23A-213ENST00000557280 ARHGAP23Q9P227 1491 aa30.9■■■□□ 2.54
SEC23A-213ENST00000557280 SLIT1O75093 1534 aa30.9■■■□□ 2.54
SEC23A-213ENST00000557280 NEURL4Q96JN8 1562 aa30.88■■■□□ 2.53
SEC23A-213ENST00000557280 CHGAP10645 457 aaKnown RBP30.88■■■□□ 2.53
SEC23A-213ENST00000557280 TMEM2Q9UHN6 1383 aa30.87■■■□□ 2.53
SEC23A-213ENST00000557280 POLR1AO95602 1720 aaPredicted RBP30.87■■■□□ 2.53
SEC23A-213ENST00000557280 CCDC144AA2RUR9 1427 aa30.84■■■□□ 2.53
SEC23A-213ENST00000557280 ANKRD30BQ9BXX2 1392 aa30.84■■■□□ 2.53
SEC23A-213ENST00000557280 ZFYVE9O95405 1425 aa30.81■■■□□ 2.52
SEC23A-213ENST00000557280 LTKP29376 864 aa30.81■■■□□ 2.52
SEC23A-213ENST00000557280 SCAF11Q99590 1463 aaKnown RBP30.81■■■□□ 2.52
SEC23A-213ENST00000557280 KIF1BO60333 1816 aa30.8■■■□□ 2.52
SEC23A-213ENST00000557280 ANKLE2Q86XL3 938 aa30.79■■■□□ 2.52
SEC23A-213ENST00000557280 RIMS2Q9UQ26 1411 aa30.79■■■□□ 2.52
SEC23A-213ENST00000557280 DHX57Q6P158 1386 aaKnown RBP30.79■■■□□ 2.52
SEC23A-213ENST00000557280 TXNDC2Q86VQ3 553 aa30.76■■■□□ 2.51
SEC23A-213ENST00000557280 MED14O60244 1454 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms