RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
MARK3-210ENST00000556463 USP35Q9P2H5 1018 aa11.43□□□□□ -0.58
MARK3-210ENST00000556463 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
MARK3-210ENST00000556463 CROCC2H7BZ55 1655 aa11.42□□□□□ -0.58
MARK3-210ENST00000556463 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
MARK3-210ENST00000556463 ZMYM4Q5VZL5 1548 aa11.42□□□□□ -0.58
MARK3-210ENST00000556463 ADGRL2O95490 1459 aa11.42□□□□□ -0.58
MARK3-210ENST00000556463 RALGAPBQ86X10 1494 aa11.42□□□□□ -0.58
MARK3-210ENST00000556463 IQGAP2Q13576 1575 aa11.42□□□□□ -0.58
MARK3-210ENST00000556463 ROCK2O75116 1388 aaKnown RBP11.41□□□□□ -0.58
MARK3-210ENST00000556463 INSRP06213 1382 aa11.41□□□□□ -0.58
MARK3-210ENST00000556463 CHIC2Q9UKJ5 165 aa11.41□□□□□ -0.58
MARK3-210ENST00000556463 ARHGEF12Q9NZN5 1544 aa11.4□□□□□ -0.58
MARK3-210ENST00000556463 MAPK8IP2Q13387 824 aaPredicted RBP11.39□□□□□ -0.59
MARK3-210ENST00000556463 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
MARK3-210ENST00000556463 BRD4O60885 1362 aaPredicted RBP11.39□□□□□ -0.59
MARK3-210ENST00000556463 USP47Q96K76 1375 aa11.39□□□□□ -0.59
MARK3-210ENST00000556463 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
MARK3-210ENST00000556463 MS4A1P11836 297 aa11.39□□□□□ -0.59
MARK3-210ENST00000556463 KIAA1107Q9UPP5 1409 aa11.39□□□□□ -0.59
MARK3-210ENST00000556463 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
MARK3-210ENST00000556463 BACH2Q9BYV9 841 aa11.38□□□□□ -0.59
MARK3-210ENST00000556463 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
MARK3-210ENST00000556463 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
MARK3-210ENST00000556463 ADCY10Q96PN6 1610 aa11.37□□□□□ -0.59
MARK3-210ENST00000556463 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
MARK3-210ENST00000556463 RRP1P56182 461 aaKnown RBP11.36□□□□□ -0.59
MARK3-210ENST00000556463 HSP90AA2PQ14568 343 aaPredicted RBP11.36□□□□□ -0.59
MARK3-210ENST00000556463 ARID3AQ99856 593 aa11.36□□□□□ -0.59
MARK3-210ENST00000556463 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
MARK3-210ENST00000556463 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
MARK3-210ENST00000556463 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
MARK3-210ENST00000556463 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
MARK3-210ENST00000556463 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
MARK3-210ENST00000556463 PDE4AP27815 886 aa11.33□□□□□ -0.6
MARK3-210ENST00000556463 ITSN2Q9NZM3 1697 aa11.33□□□□□ -0.6
MARK3-210ENST00000556463 PARD3Q8TEW0 1356 aa11.33□□□□□ -0.6
MARK3-210ENST00000556463 PDE4CQ08493 712 aa11.33□□□□□ -0.6
MARK3-210ENST00000556463 DISP1Q96F81 1524 aa11.32□□□□□ -0.6
MARK3-210ENST00000556463 KIAA0556O60303 1618 aa11.32□□□□□ -0.6
MARK3-210ENST00000556463 PDE3BQ13370 1112 aa11.32□□□□□ -0.6
MARK3-210ENST00000556463 MYBBP1AQ9BQG0 1328 aaKnown RBP11.32□□□□□ -0.6
MARK3-210ENST00000556463 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
MARK3-210ENST00000556463 CAMSAP2Q08AD1 1489 aa11.32□□□□□ -0.6
MARK3-210ENST00000556463 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
MARK3-210ENST00000556463 RALBP1Q15311 655 aa11.32□□□□□ -0.6
MARK3-210ENST00000556463 RAPGEF6Q8TEU7 1601 aa11.31□□□□□ -0.6
MARK3-210ENST00000556463 BLMP54132 1417 aaPredicted RBP11.31□□□□□ -0.6
MARK3-210ENST00000556463 EXOC6Q8TAG9 804 aa11.31□□□□□ -0.6
MARK3-210ENST00000556463 LAMC1P11047 1609 aa11.31□□□□□ -0.6
MARK3-210ENST00000556463 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
MARK3-210ENST00000556463 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
MARK3-210ENST00000556463 PTPRGP23470 1445 aa11.3□□□□□ -0.6
MARK3-210ENST00000556463 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
MARK3-210ENST00000556463 PPM1GO15355 546 aaPredicted RBP11.29□□□□□ -0.6
MARK3-210ENST00000556463 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
MARK3-210ENST00000556463 SHANK2Q9UPX8 1470 aa11.29□□□□□ -0.6
MARK3-210ENST00000556463 TRPM1Q7Z4N2 1603 aa11.29□□□□□ -0.6
MARK3-210ENST00000556463 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
MARK3-210ENST00000556463 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
MARK3-210ENST00000556463 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
MARK3-210ENST00000556463 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
MARK3-210ENST00000556463 CDC42BPAQ5VT25 1732 aa11.27□□□□□ -0.6
MARK3-210ENST00000556463 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
MARK3-210ENST00000556463 TMC1Q8TDI8 760 aa11.27□□□□□ -0.61
MARK3-210ENST00000556463 PLEKHH2Q8IVE3 1493 aa11.26□□□□□ -0.61
MARK3-210ENST00000556463 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
MARK3-210ENST00000556463 GSE1Q14687 1217 aa11.26□□□□□ -0.61
MARK3-210ENST00000556463 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
MARK3-210ENST00000556463 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
MARK3-210ENST00000556463 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
MARK3-210ENST00000556463 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
MARK3-210ENST00000556463 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
MARK3-210ENST00000556463 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
MARK3-210ENST00000556463 NLRP13Q86W25 1043 aa11.23□□□□□ -0.61
MARK3-210ENST00000556463 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
MARK3-210ENST00000556463 VIRMAQ69YN4 1812 aaKnown RBP11.23□□□□□ -0.61
MARK3-210ENST00000556463 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
MARK3-210ENST00000556463 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
MARK3-210ENST00000556463 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
MARK3-210ENST00000556463 ANKRD50Q9ULJ7 1429 aa11.22□□□□□ -0.61
MARK3-210ENST00000556463 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
MARK3-210ENST00000556463 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
MARK3-210ENST00000556463 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
MARK3-210ENST00000556463 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
MARK3-210ENST00000556463 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.62
MARK3-210ENST00000556463 ANKRD30AQ9BXX3 1397 aa11.2□□□□□ -0.62
MARK3-210ENST00000556463 PRAG1Q86YV5 1406 aa11.2□□□□□ -0.62
MARK3-210ENST00000556463 ST20-MTHFSA0A0A6YYL1 179 aa11.2□□□□□ -0.62
MARK3-210ENST00000556463 PRG4Q92954 1404 aaPredicted RBP11.2□□□□□ -0.62
MARK3-210ENST00000556463 ARHGEF5Q12774 1597 aa11.19□□□□□ -0.62
MARK3-210ENST00000556463 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
MARK3-210ENST00000556463 CARD11Q9BXL7 1154 aa11.18□□□□□ -0.62
MARK3-210ENST00000556463 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
MARK3-210ENST00000556463 PDIA4P13667 645 aaKnown RBP11.18□□□□□ -0.62
MARK3-210ENST00000556463 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
MARK3-210ENST00000556463 ZNF521Q96K83 1311 aa11.17□□□□□ -0.62
MARK3-210ENST00000556463 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
MARK3-210ENST00000556463 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
MARK3-210ENST00000556463 RNF17Q9BXT8 1623 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms