RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
ABCD4-223ENST00000555904 MLECQ14165 292 aa18.58■□□□□ 0.56
ABCD4-223ENST00000555904 TRIM52Q96A61 297 aa18.58■□□□□ 0.56
ABCD4-223ENST00000555904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.563e-12■□□□□ 9.5
ABCD4-223ENST00000555904 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
ABCD4-223ENST00000555904 UNC13BO14795 1591 aa18.58■□□□□ 0.56
ABCD4-223ENST00000555904 SIGLEC1Q9BZZ2 1709 aa18.57■□□□□ 0.56
ABCD4-223ENST00000555904 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
ABCD4-223ENST00000555904 HRCP23327 699 aa18.57■□□□□ 0.56
ABCD4-223ENST00000555904 PRDM15P57071 1507 aaPredicted RBP18.57■□□□□ 0.56
ABCD4-223ENST00000555904 NUP155O75694 1391 aa18.55■□□□□ 0.56
ABCD4-223ENST00000555904 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
ABCD4-223ENST00000555904 FAM135AQ9P2D6 1515 aa18.54■□□□□ 0.56
ABCD4-223ENST00000555904 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
ABCD4-223ENST00000555904 KDM5DQ9BY66 1539 aa18.53■□□□□ 0.56
ABCD4-223ENST00000555904 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.56
ABCD4-223ENST00000555904 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
ABCD4-223ENST00000555904 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
ABCD4-223ENST00000555904 IQGAP3Q86VI3 1631 aa18.49■□□□□ 0.55
ABCD4-223ENST00000555904 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
ABCD4-223ENST00000555904 ABCC3O15438 1527 aa18.48■□□□□ 0.55
ABCD4-223ENST00000555904 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
ABCD4-223ENST00000555904 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
ABCD4-223ENST00000555904 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
ABCD4-223ENST00000555904 MADDQ8WXG6 1647 aa18.44■□□□□ 0.54
ABCD4-223ENST00000555904 PZPP20742 1482 aa18.44■□□□□ 0.54
ABCD4-223ENST00000555904 TET3O43151 1660 aa18.44■□□□□ 0.54
ABCD4-223ENST00000555904 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
ABCD4-223ENST00000555904 CEP152O94986 1710 aa18.43■□□□□ 0.54
ABCD4-223ENST00000555904 CAMSAP1Q5T5Y3 1602 aa18.43■□□□□ 0.54
ABCD4-223ENST00000555904 MPHOSPH9Q99550 1183 aa18.43■□□□□ 0.54
ABCD4-223ENST00000555904 ADAMTSL3P82987 1691 aa18.43■□□□□ 0.54
ABCD4-223ENST00000555904 EFCAB6Q5THR3 1501 aa18.43■□□□□ 0.54
ABCD4-223ENST00000555904 MROH2AA6NES4 1674 aa18.41■□□□□ 0.54
ABCD4-223ENST00000555904 RPRD2Q5VT52 1461 aaKnown RBP18.4■□□□□ 0.54
ABCD4-223ENST00000555904 RIMS1Q86UR5 1692 aaKnown RBP18.39■□□□□ 0.53
ABCD4-223ENST00000555904 PKD2Q13563 968 aa18.39■□□□□ 0.53
ABCD4-223ENST00000555904 ZMYM3Q14202 1370 aa18.39■□□□□ 0.53
ABCD4-223ENST00000555904 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
ABCD4-223ENST00000555904 NPATQ14207 1427 aa18.37■□□□□ 0.53
ABCD4-223ENST00000555904 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
ABCD4-223ENST00000555904 E9PCH4 1651 aa18.34■□□□□ 0.53
ABCD4-223ENST00000555904 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
ABCD4-223ENST00000555904 PTPRMP28827 1452 aa18.33■□□□□ 0.52
ABCD4-223ENST00000555904 C3P01024 1663 aa18.32■□□□□ 0.52
ABCD4-223ENST00000555904 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
ABCD4-223ENST00000555904 FOXD1Q16676 465 aa18.31■□□□□ 0.52
ABCD4-223ENST00000555904 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
ABCD4-223ENST00000555904 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
ABCD4-223ENST00000555904 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
ABCD4-223ENST00000555904 PREX1Q8TCU6 1659 aa18.28■□□□□ 0.52
ABCD4-223ENST00000555904 FBXO31Q5XUX0 539 aaPredicted RBP18.28■□□□□ 0.52
ABCD4-223ENST00000555904 SPATA31D1Q6ZQQ2 1576 aa18.28■□□□□ 0.52
ABCD4-223ENST00000555904 SPHKAPQ2M3C7 1700 aa18.28■□□□□ 0.52
ABCD4-223ENST00000555904 PTPRTO14522 1441 aa18.27■□□□□ 0.52
ABCD4-223ENST00000555904 NOS1P29475 1434 aa18.27■□□□□ 0.52
ABCD4-223ENST00000555904 TRPM2O94759 1503 aa18.27■□□□□ 0.51
ABCD4-223ENST00000555904 TNRQ92752 1358 aa18.27■□□□□ 0.51
ABCD4-223ENST00000555904 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
ABCD4-223ENST00000555904 SLC52A1Q9NWF4 448 aa18.24■□□□□ 0.51
ABCD4-223ENST00000555904 ANKRD30BQ9BXX2 1392 aa18.24■□□□□ 0.51
ABCD4-223ENST00000555904 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
ABCD4-223ENST00000555904 SYNMO15061 1565 aa18.22■□□□□ 0.51
ABCD4-223ENST00000555904 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
ABCD4-223ENST00000555904 PLA2R1Q13018 1463 aa18.21■□□□□ 0.51
ABCD4-223ENST00000555904 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
ABCD4-223ENST00000555904 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
ABCD4-223ENST00000555904 UGGT1Q9NYU2 1555 aa18.18■□□□□ 0.5
ABCD4-223ENST00000555904 UHRF1BP1Q6BDS2 1440 aa18.18■□□□□ 0.5
ABCD4-223ENST00000555904 CLTCL1P53675 1640 aa18.18■□□□□ 0.5
ABCD4-223ENST00000555904 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
ABCD4-223ENST00000555904 CFAP65Q6ZU64 1925 aaKnown RBP18.17■□□□□ 0.5
ABCD4-223ENST00000555904 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
ABCD4-223ENST00000555904 IDI1Q13907 227 aa18.16■□□□□ 0.5
ABCD4-223ENST00000555904 A2ML1A8K2U0 1454 aa18.14■□□□□ 0.5
ABCD4-223ENST00000555904 ADGRB3O60242 1522 aa18.14■□□□□ 0.49
ABCD4-223ENST00000555904 CEP170BQ9Y4F5 1589 aaPredicted RBP18.14■□□□□ 0.49
ABCD4-223ENST00000555904 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
ABCD4-223ENST00000555904 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
ABCD4-223ENST00000555904 ZNF326Q5BKZ1 582 aaKnown RBP18.11■□□□□ 0.49
ABCD4-223ENST00000555904 ZNF142P52746 1687 aaPredicted RBP18.11■□□□□ 0.49
ABCD4-223ENST00000555904 KIF1BO60333 1816 aa18.11■□□□□ 0.49
ABCD4-223ENST00000555904 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
ABCD4-223ENST00000555904 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
ABCD4-223ENST00000555904 NEURL4Q96JN8 1562 aa18.09■□□□□ 0.49
ABCD4-223ENST00000555904 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
ABCD4-223ENST00000555904 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
ABCD4-223ENST00000555904 RGL3Q3MIN7 710 aa18.08■□□□□ 0.48
ABCD4-223ENST00000555904 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
ABCD4-223ENST00000555904 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.48
ABCD4-223ENST00000555904 SPATA31E1Q6ZUB1 1445 aa18.07■□□□□ 0.48
ABCD4-223ENST00000555904 UBR1Q8IWV7 1749 aa18.07■□□□□ 0.48
ABCD4-223ENST00000555904 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
ABCD4-223ENST00000555904 RPGRIP1LQ68CZ1 1315 aa18.04■□□□□ 0.48
ABCD4-223ENST00000555904 LMTK3Q96Q04 1460 aa18.03■□□□□ 0.48
ABCD4-223ENST00000555904 TIMELESSQ9UNS1 1208 aa18.03■□□□□ 0.48
ABCD4-223ENST00000555904 EID1Q9Y6B2 187 aa18.03■□□□□ 0.48
ABCD4-223ENST00000555904 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
ABCD4-223ENST00000555904 PPP1R15AO75807 674 aaPredicted RBP18.02■□□□□ 0.48
ABCD4-223ENST00000555904 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms