RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 NPATQ14207 1427 aa32■■■□□ 2.71
HIF1A-206ENST00000553999 WASHC2CQ9Y4E1 1318 aa32■■■□□ 2.71
HIF1A-206ENST00000553999 SETD1BQ9UPS6 1966 aaKnown RBP31.99■■■□□ 2.71
HIF1A-206ENST00000553999 KIF15Q9NS87 1388 aa31.98■■■□□ 2.71
HIF1A-206ENST00000553999 ILDR1Q86SU0 546 aaPredicted RBP31.97■■■□□ 2.71
HIF1A-206ENST00000553999 SHANK2Q9UPX8 1470 aa31.97■■■□□ 2.71
HIF1A-206ENST00000553999 MYO3AQ8NEV4 1616 aa31.97■■■□□ 2.71
HIF1A-206ENST00000553999 PPP6R1Q9UPN7 881 aa31.96■■■□□ 2.71
HIF1A-206ENST00000553999 FBXO31Q5XUX0 539 aaPredicted RBP31.95■■■□□ 2.71
HIF1A-206ENST00000553999 DUOX2Q9NRD8 1548 aa31.93■■■□□ 2.7
HIF1A-206ENST00000553999 STRCQ7RTU9 1775 aa31.92■■■□□ 2.7
HIF1A-206ENST00000553999 RNF17Q9BXT8 1623 aaKnown RBP31.92■■■□□ 2.7
HIF1A-206ENST00000553999 EIF2AK4Q9P2K8 1649 aaKnown RBP31.9■■■□□ 2.7
HIF1A-206ENST00000553999 CAMSAP1Q5T5Y3 1602 aa31.87■■■□□ 2.69
HIF1A-206ENST00000553999 MROH1Q8NDA8 1641 aa31.87■■■□□ 2.69
HIF1A-206ENST00000553999 CEP170BQ9Y4F5 1589 aaPredicted RBP31.87■■■□□ 2.69
HIF1A-206ENST00000553999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.87■■■□□ 2.691e-6■■□□□ 14.2
HIF1A-206ENST00000553999 ABCC3O15438 1527 aa31.86■■■□□ 2.69
HIF1A-206ENST00000553999 PZPP20742 1482 aa31.85■■■□□ 2.69
HIF1A-206ENST00000553999 TNRQ92752 1358 aa31.85■■■□□ 2.69
HIF1A-206ENST00000553999 CEP152O94986 1710 aa31.85■■■□□ 2.69
HIF1A-206ENST00000553999 ANKRD30AQ9BXX3 1397 aa31.84■■■□□ 2.69
HIF1A-206ENST00000553999 FAM135AQ9P2D6 1515 aa31.83■■■□□ 2.69
HIF1A-206ENST00000553999 ZNF142P52746 1687 aaPredicted RBP31.83■■■□□ 2.69
HIF1A-206ENST00000553999 NCOA1Q15788 1441 aa31.82■■■□□ 2.68
HIF1A-206ENST00000553999 ERBINQ96RT1 1412 aa31.81■■■□□ 2.68
HIF1A-206ENST00000553999 NCKAP5LQ9HCH0 1330 aa31.8■■■□□ 2.68
HIF1A-206ENST00000553999 ITGAEP38570 1179 aa31.79■■■□□ 2.68
HIF1A-206ENST00000553999 ZC3H13Q5T200 1668 aaKnown RBP31.78■■■□□ 2.68
HIF1A-206ENST00000553999 A2ML1A8K2U0 1454 aa31.76■■■□□ 2.67
HIF1A-206ENST00000553999 DMRT2Q9Y5R5 561 aa31.75■■■□□ 2.67
HIF1A-206ENST00000553999 PRDM15P57071 1507 aaPredicted RBP31.74■■■□□ 2.67
HIF1A-206ENST00000553999 ADGRL2O95490 1459 aa31.72■■■□□ 2.67
HIF1A-206ENST00000553999 ERVK-7P63135 1459 aa31.69■■■□□ 2.66
HIF1A-206ENST00000553999 PTPRTO14522 1441 aa31.68■■■□□ 2.66
HIF1A-206ENST00000553999 CFAP65Q6ZU64 1925 aaKnown RBP31.68■■■□□ 2.66
HIF1A-206ENST00000553999 KANK1Q14678 1352 aa31.68■■■□□ 2.66
HIF1A-206ENST00000553999 DEPDC5O75140 1603 aa31.67■■■□□ 2.66
HIF1A-206ENST00000553999 CERKQ8TCT0 537 aa31.67■■■□□ 2.66
HIF1A-206ENST00000553999 FBXO41Q8TF61 875 aa31.65■■■□□ 2.66
HIF1A-206ENST00000553999 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
HIF1A-206ENST00000553999 SPATA31D1Q6ZQQ2 1576 aa31.64■■■□□ 2.66
HIF1A-206ENST00000553999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.63■■■□□ 2.65
HIF1A-206ENST00000553999 ANKRD50Q9ULJ7 1429 aa31.63■■■□□ 2.65
HIF1A-206ENST00000553999 UGGT1Q9NYU2 1555 aa31.61■■■□□ 2.65
HIF1A-206ENST00000553999 NLRP1Q9C000 1473 aa31.61■■■□□ 2.65
HIF1A-206ENST00000553999 PKD2Q13563 968 aa31.58■■■□□ 2.65
HIF1A-206ENST00000553999 ZNF335Q9H4Z2 1342 aaPredicted RBP31.55■■■□□ 2.64
HIF1A-206ENST00000553999 POLR1AO95602 1720 aaPredicted RBP31.53■■■□□ 2.64
HIF1A-206ENST00000553999 VWDEQ8N2E2 1590 aa31.53■■■□□ 2.64
HIF1A-206ENST00000553999 ARHGAP31Q2M1Z3 1444 aa31.52■■■□□ 2.64
HIF1A-206ENST00000553999 THEMISQ8N1K5 641 aaPredicted RBP31.52■■■□□ 2.64
HIF1A-206ENST00000553999 NEURL4Q96JN8 1562 aa31.51■■■□□ 2.64
HIF1A-206ENST00000553999 LMTK2Q8IWU2 1503 aa31.49■■■□□ 2.63
HIF1A-206ENST00000553999 LTBP4Q8N2S1 1624 aa31.49■■■□□ 2.63
HIF1A-206ENST00000553999 EFCAB6Q5THR3 1501 aa31.49■■■□□ 2.63
HIF1A-206ENST00000553999 ANKLE2Q86XL3 938 aa31.48■■■□□ 2.63
HIF1A-206ENST00000553999 ROCK1Q13464 1354 aa31.47■■■□□ 2.63
HIF1A-206ENST00000553999 UBR1Q8IWV7 1749 aa31.45■■■□□ 2.63
HIF1A-206ENST00000553999 RRBP1Q9P2E9 1410 aaKnown RBP31.43■■■□□ 2.62
HIF1A-206ENST00000553999 PIK3C2BO00750 1634 aa31.43■■■□□ 2.62
HIF1A-206ENST00000553999 UNC13BO14795 1591 aa31.43■■■□□ 2.62
HIF1A-206ENST00000553999 STAG3Q9UJ98 1225 aa31.42■■■□□ 2.62
HIF1A-206ENST00000553999 SYNMO15061 1565 aa31.42■■■□□ 2.62
HIF1A-206ENST00000553999 NPHP4O75161 1426 aaPredicted RBP31.41■■■□□ 2.62
HIF1A-206ENST00000553999 TET3O43151 1660 aa31.37■■■□□ 2.61
HIF1A-206ENST00000553999 IDI1Q13907 227 aa31.36■■■□□ 2.61
HIF1A-206ENST00000553999 IQGAP1P46940 1657 aa31.35■■■□□ 2.61
HIF1A-206ENST00000553999 NOS1P29475 1434 aa31.33■■■□□ 2.61
HIF1A-206ENST00000553999 NUP155O75694 1391 aa31.33■■■□□ 2.61
HIF1A-206ENST00000553999 SENP3Q9H4L4 574 aaPredicted RBP31.33■■■□□ 2.61
HIF1A-206ENST00000553999 LTKP29376 864 aa31.31■■■□□ 2.6
HIF1A-206ENST00000553999 TXNDC2Q86VQ3 553 aa31.31■■■□□ 2.6
HIF1A-206ENST00000553999 SCAF11Q99590 1463 aaKnown RBP31.31■■■□□ 2.6
HIF1A-206ENST00000553999 GCC2Q8IWJ2 1684 aa31.31■■■□□ 2.6
HIF1A-206ENST00000553999 IQGAP3Q86VI3 1631 aa31.3■■■□□ 2.6
HIF1A-206ENST00000553999 MED14O60244 1454 aa31.29■■■□□ 2.6
HIF1A-206ENST00000553999 E9PCH4 1651 aa31.29■■■□□ 2.6
HIF1A-206ENST00000553999 RPRD2Q5VT52 1461 aaKnown RBP31.27■■■□□ 2.6
HIF1A-206ENST00000553999 ARHGAP23Q9P227 1491 aa31.27■■■□□ 2.6
HIF1A-206ENST00000553999 ADGRB3O60242 1522 aa31.26■■■□□ 2.59
HIF1A-206ENST00000553999 SLIT1O75093 1534 aa31.26■■■□□ 2.59
HIF1A-206ENST00000553999 CHGAP10645 457 aaKnown RBP31.25■■■□□ 2.59
HIF1A-206ENST00000553999 EID1Q9Y6B2 187 aa31.25■■■□□ 2.59
HIF1A-206ENST00000553999 TMEM2Q9UHN6 1383 aa31.25■■■□□ 2.59
HIF1A-206ENST00000553999 NAIPQ13075 1403 aa31.22■■■□□ 2.59
HIF1A-206ENST00000553999 UBAP1LF5GYI3 381 aa31.21■■■□□ 2.59
HIF1A-206ENST00000553999 SLC52A1Q9NWF4 448 aa31.2■■■□□ 2.59
HIF1A-206ENST00000553999 IQSEC2Q5JU85 1478 aa31.19■■■□□ 2.58
HIF1A-206ENST00000553999 CPS1P31327 1500 aa31.17■■■□□ 2.58
HIF1A-206ENST00000553999 MYO5BQ9ULV0 1848 aa31.17■■■□□ 2.58
HIF1A-206ENST00000553999 BCANQ96GW7 911 aa31.16■■■□□ 2.58
HIF1A-206ENST00000553999 TRIM52Q96A61 297 aa31.15■■■□□ 2.58
HIF1A-206ENST00000553999 KDM5AP29375 1690 aaKnown RBP31.15■■■□□ 2.58
HIF1A-206ENST00000553999 STRCP1A6NGW2 1772 aa31.15■■■□□ 2.58
HIF1A-206ENST00000553999 NUTM2DQ5VT03 806 aaPredicted RBP31.13■■■□□ 2.57
HIF1A-206ENST00000553999 SCAF1Q9H7N4 1312 aaKnown RBP31.13■■■□□ 2.57
HIF1A-206ENST00000553999 SLC26A8Q96RN1 970 aa31.12■■■□□ 2.57
HIF1A-206ENST00000553999 HFM1A2PYH4 1435 aa31.11■■■□□ 2.57
HIF1A-206ENST00000553999 TMEM131LA2VDJ0 1609 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms