RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.55
CCNK-203ENST00000553865 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
CCNK-203ENST00000553865 CCDC144AA2RUR9 1427 aa11.64□□□□□ -0.55
CCNK-203ENST00000553865 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
CCNK-203ENST00000553865 SENP3Q9H4L4 574 aaPredicted RBP11.63□□□□□ -0.55
CCNK-203ENST00000553865 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
CCNK-203ENST00000553865 RAPGEF6Q8TEU7 1601 aa11.63□□□□□ -0.55
CCNK-203ENST00000553865 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
CCNK-203ENST00000553865 KIF15Q9NS87 1388 aa11.63□□□□□ -0.55
CCNK-203ENST00000553865 ANKRD50Q9ULJ7 1429 aa11.62□□□□□ -0.55
CCNK-203ENST00000553865 RGS3P49796 1198 aa11.62□□□□□ -0.55
CCNK-203ENST00000553865 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
CCNK-203ENST00000553865 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
CCNK-203ENST00000553865 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
CCNK-203ENST00000553865 CFAP43Q8NDM7 1665 aa11.61□□□□□ -0.55
CCNK-203ENST00000553865 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
CCNK-203ENST00000553865 ITSN2Q9NZM3 1697 aa11.6□□□□□ -0.55
CCNK-203ENST00000553865 KIAA0556O60303 1618 aa11.6□□□□□ -0.55
CCNK-203ENST00000553865 KIF3BO15066 747 aa11.6□□□□□ -0.55
CCNK-203ENST00000553865 U2SURPO15042 1029 aaKnown RBP11.6□□□□□ -0.55
CCNK-203ENST00000553865 DAPK1P53355 1430 aa11.59□□□□□ -0.55
CCNK-203ENST00000553865 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
CCNK-203ENST00000553865 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
CCNK-203ENST00000553865 NUP160Q12769 1436 aa11.58□□□□□ -0.55
CCNK-203ENST00000553865 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
CCNK-203ENST00000553865 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
CCNK-203ENST00000553865 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
CCNK-203ENST00000553865 TARBP1Q13395 1621 aaKnown RBP11.58□□□□□ -0.56
CCNK-203ENST00000553865 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
CCNK-203ENST00000553865 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
CCNK-203ENST00000553865 GOLGA6L4A6NEF3 574 aa11.57□□□□□ -0.56
CCNK-203ENST00000553865 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
CCNK-203ENST00000553865 SRPK2P78362 688 aaKnown RBP11.56□□□□□ -0.56
CCNK-203ENST00000553865 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
CCNK-203ENST00000553865 GGT6Q6P531 493 aa11.56□□□□□ -0.56
CCNK-203ENST00000553865 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
CCNK-203ENST00000553865 CDK13Q14004 1512 aaKnown RBP11.56□□□□□ -0.56
CCNK-203ENST00000553865 DRC7Q8IY82 874 aa11.55□□□□□ -0.56
CCNK-203ENST00000553865 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
CCNK-203ENST00000553865 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
CCNK-203ENST00000553865 SAMD9Q5K651 1589 aa11.55□□□□□ -0.56
CCNK-203ENST00000553865 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
CCNK-203ENST00000553865 HDGFL2Q7Z4V5 671 aaPredicted RBP11.53□□□□□ -0.56
CCNK-203ENST00000553865 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
CCNK-203ENST00000553865 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
CCNK-203ENST00000553865 PLB1Q6P1J6 1458 aa11.53□□□□□ -0.56
CCNK-203ENST00000553865 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
CCNK-203ENST00000553865 TRHP20396 242 aaPredicted RBP11.52□□□□□ -0.56
CCNK-203ENST00000553865 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
CCNK-203ENST00000553865 IPO8O15397 1037 aaKnown RBP11.51□□□□□ -0.57
CCNK-203ENST00000553865 FGD1P98174 961 aa11.51□□□□□ -0.57
CCNK-203ENST00000553865 TSHZ2Q9NRE2 1034 aa11.51□□□□□ -0.57
CCNK-203ENST00000553865 HSCBQ8IWL3 235 aa11.51□□□□□ -0.57
CCNK-203ENST00000553865 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
CCNK-203ENST00000553865 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
CCNK-203ENST00000553865 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
CCNK-203ENST00000553865 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
CCNK-203ENST00000553865 GOLGA6L1Q8N7Z2 621 aa11.5□□□□□ -0.57
CCNK-203ENST00000553865 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
CCNK-203ENST00000553865 NOC3LQ8WTT2 800 aaKnown RBP11.5□□□□□ -0.57
CCNK-203ENST00000553865 TCOF1Q13428 1488 aaKnown RBP11.5□□□□□ -0.57
CCNK-203ENST00000553865 PTMSP20962 102 aa11.49□□□□□ -0.57
CCNK-203ENST00000553865 MCCP23508 829 aa11.49□□□□□ -0.57
CCNK-203ENST00000553865 KCNJ4P48050 445 aa11.49□□□□□ -0.57
CCNK-203ENST00000553865 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
CCNK-203ENST00000553865 USP35Q9P2H5 1018 aa11.48□□□□□ -0.57
CCNK-203ENST00000553865 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
CCNK-203ENST00000553865 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCNK-203ENST00000553865 RWDD1Q9H446 243 aaPredicted RBP11.48□□□□□ -0.57
CCNK-203ENST00000553865 NAIPQ13075 1403 aa11.47□□□□□ -0.57
CCNK-203ENST00000553865 NPHP1O15259 732 aa11.47□□□□□ -0.57
CCNK-203ENST00000553865 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
CCNK-203ENST00000553865 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
CCNK-203ENST00000553865 EID1Q9Y6B2 187 aa11.47□□□□□ -0.57
CCNK-203ENST00000553865 ZBED9Q6R2W3 1325 aa11.47□□□□□ -0.57
CCNK-203ENST00000553865 U2AF1L5P0DN76 240 aaPredicted RBP11.47□□□□□ -0.57
CCNK-203ENST00000553865 U2AF1Q01081 240 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCNK-203ENST00000553865 SAFB2Q14151 953 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCNK-203ENST00000553865 NUP153P49790 1475 aaKnown RBP11.47□□□□□ -0.57
CCNK-203ENST00000553865 USP47Q96K76 1375 aa11.47□□□□□ -0.57
CCNK-203ENST00000553865 PMFBP1Q8TBY8 1022 aa11.46□□□□□ -0.57
CCNK-203ENST00000553865 ARID3AQ99856 593 aa11.46□□□□□ -0.58
CCNK-203ENST00000553865 SHANK2Q9UPX8 1470 aa11.46□□□□□ -0.58
CCNK-203ENST00000553865 STK26Q9P289 416 aa11.46□□□□□ -0.58
CCNK-203ENST00000553865 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.58
CCNK-203ENST00000553865 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
CCNK-203ENST00000553865 CHMP4AQ9BY43 222 aa11.45□□□□□ -0.58
CCNK-203ENST00000553865 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
CCNK-203ENST00000553865 ABCC5O15440 1437 aa11.45□□□□□ -0.58
CCNK-203ENST00000553865 ABCC2Q92887 1545 aa11.44□□□□□ -0.58
CCNK-203ENST00000553865 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
CCNK-203ENST00000553865 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
CCNK-203ENST00000553865 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
CCNK-203ENST00000553865 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
CCNK-203ENST00000553865 RTF1Q92541 710 aaKnown RBP11.44□□□□□ -0.58
CCNK-203ENST00000553865 NAP1L2Q9ULW6 460 aaPredicted RBP11.43□□□□□ -0.58
CCNK-203ENST00000553865 PPP6R1Q9UPN7 881 aa11.43□□□□□ -0.58
CCNK-203ENST00000553865 ATP10BO94823 1461 aa11.43□□□□□ -0.58
CCNK-203ENST00000553865 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
CCNK-203ENST00000553865 GPATCH8Q9UKJ3 1502 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms