RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 INO80Q9ULG1 1556 aaPredicted RBP19.76■□□□□ 0.75
SNRPF-205ENST00000553192 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
SNRPF-205ENST00000553192 RNF17Q9BXT8 1623 aaKnown RBP19.73■□□□□ 0.75
SNRPF-205ENST00000553192 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
SNRPF-205ENST00000553192 KIAA1107Q9UPP5 1409 aa19.71■□□□□ 0.75
SNRPF-205ENST00000553192 THEMISQ8N1K5 641 aaPredicted RBP19.71■□□□□ 0.75
SNRPF-205ENST00000553192 DEPDC5O75140 1603 aa19.71■□□□□ 0.75
SNRPF-205ENST00000553192 PZPP20742 1482 aa19.69■□□□□ 0.74
SNRPF-205ENST00000553192 MIA2Q96PC5 1412 aa19.67■□□□□ 0.74
SNRPF-205ENST00000553192 SYNMO15061 1565 aa19.66■□□□□ 0.74
SNRPF-205ENST00000553192 SETD1AO15047 1707 aaKnown RBP19.66■□□□□ 0.74
SNRPF-205ENST00000553192 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
SNRPF-205ENST00000553192 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
SNRPF-205ENST00000553192 IQGAP1P46940 1657 aa19.65■□□□□ 0.74
SNRPF-205ENST00000553192 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
SNRPF-205ENST00000553192 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
SNRPF-205ENST00000553192 NLRP1Q9C000 1473 aa19.64■□□□□ 0.73
SNRPF-205ENST00000553192 FAM135AQ9P2D6 1515 aa19.64■□□□□ 0.73
SNRPF-205ENST00000553192 PLEKHH2Q8IVE3 1493 aa19.62■□□□□ 0.73
SNRPF-205ENST00000553192 FAM135BQ49AJ0 1406 aa19.62■□□□□ 0.73
SNRPF-205ENST00000553192 CASKIN1Q8WXD9 1431 aa19.62■□□□□ 0.73
SNRPF-205ENST00000553192 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
SNRPF-205ENST00000553192 ADGBQ8N7X0 1667 aa19.62■□□□□ 0.73
SNRPF-205ENST00000553192 UPF1Q92900 1129 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNRPF-205ENST00000553192 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
SNRPF-205ENST00000553192 KDM5DQ9BY66 1539 aa19.59■□□□□ 0.73
SNRPF-205ENST00000553192 KIF3BO15066 747 aa19.58■□□□□ 0.72
SNRPF-205ENST00000553192 MBD5Q9P267 1494 aa19.57■□□□□ 0.72
SNRPF-205ENST00000553192 ZNF644Q9H582 1327 aaPredicted RBP19.56■□□□□ 0.72
SNRPF-205ENST00000553192 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
SNRPF-205ENST00000553192 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
SNRPF-205ENST00000553192 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
SNRPF-205ENST00000553192 XIRP1Q702N8 1843 aaKnown RBP19.55■□□□□ 0.72
SNRPF-205ENST00000553192 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
SNRPF-205ENST00000553192 LTKP29376 864 aa19.49■□□□□ 0.71
SNRPF-205ENST00000553192 SCAF11Q99590 1463 aaKnown RBP19.48■□□□□ 0.71
SNRPF-205ENST00000553192 ROBO1Q9Y6N7 1651 aa19.46■□□□□ 0.71
SNRPF-205ENST00000553192 SRCAPQ6ZRS2 3230 aa19.46■□□□□ 0.71
SNRPF-205ENST00000553192 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
SNRPF-205ENST00000553192 TMEM94Q12767 1356 aa19.45■□□□□ 0.7
SNRPF-205ENST00000553192 NCOA2Q15596 1464 aa19.45■□□□□ 0.7
SNRPF-205ENST00000553192 ERVK-7P63135 1459 aa19.43■□□□□ 0.7
SNRPF-205ENST00000553192 ARHGAP23Q9P227 1491 aa19.43■□□□□ 0.7
SNRPF-205ENST00000553192 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
SNRPF-205ENST00000553192 TXNDC2Q86VQ3 553 aa19.42■□□□□ 0.7
SNRPF-205ENST00000553192 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
SNRPF-205ENST00000553192 JCADQ9P266 1359 aa19.42■□□□□ 0.7
SNRPF-205ENST00000553192 RBM33Q96EV2 1170 aaKnown RBP19.41■□□□□ 0.7
SNRPF-205ENST00000553192 UBR1Q8IWV7 1749 aa19.4■□□□□ 0.7
SNRPF-205ENST00000553192 ABCC3O15438 1527 aa19.4■□□□□ 0.7
SNRPF-205ENST00000553192 SLIT1O75093 1534 aa19.4■□□□□ 0.7
SNRPF-205ENST00000553192 LRP6O75581 1613 aa19.4■□□□□ 0.7
SNRPF-205ENST00000553192 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
SNRPF-205ENST00000553192 KCNA6P17658 529 aa19.36■□□□□ 0.69
SNRPF-205ENST00000553192 CCDC141Q6ZP82 1450 aa19.35■□□□□ 0.69
SNRPF-205ENST00000553192 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
SNRPF-205ENST00000553192 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
SNRPF-205ENST00000553192 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
SNRPF-205ENST00000553192 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
SNRPF-205ENST00000553192 PROSER2Q86WR7 435 aaPredicted RBP19.33■□□□□ 0.68
SNRPF-205ENST00000553192 PHLPP1O60346 1717 aa19.32■□□□□ 0.68
SNRPF-205ENST00000553192 SLAIN2Q9P270 581 aa19.32■□□□□ 0.68
SNRPF-205ENST00000553192 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
SNRPF-205ENST00000553192 PRDM15P57071 1507 aaPredicted RBP19.3■□□□□ 0.68
SNRPF-205ENST00000553192 SPATA31A6Q5VVP1 1343 aa19.3■□□□□ 0.68
SNRPF-205ENST00000553192 COL16A1Q07092 1604 aaPredicted RBP19.3■□□□□ 0.68
SNRPF-205ENST00000553192 RXRBP28702 533 aa19.3■□□□□ 0.68
SNRPF-205ENST00000553192 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
SNRPF-205ENST00000553192 TMEM2Q9UHN6 1383 aa19.29■□□□□ 0.68
SNRPF-205ENST00000553192 MROH1Q8NDA8 1641 aa19.28■□□□□ 0.68
SNRPF-205ENST00000553192 CDK12Q9NYV4 1490 aaPredicted RBP19.28■□□□□ 0.68
SNRPF-205ENST00000553192 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
SNRPF-205ENST00000553192 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
SNRPF-205ENST00000553192 CAMSAP2Q08AD1 1489 aa19.27■□□□□ 0.67
SNRPF-205ENST00000553192 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
SNRPF-205ENST00000553192 TET3O43151 1660 aa19.26■□□□□ 0.67
SNRPF-205ENST00000553192 CEP162Q5TB80 1403 aa19.25■□□□□ 0.67
SNRPF-205ENST00000553192 MSH6P52701 1360 aa19.25■□□□□ 0.67
SNRPF-205ENST00000553192 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
SNRPF-205ENST00000553192 NWD1Q149M9 1564 aa19.23■□□□□ 0.67
SNRPF-205ENST00000553192 EHBP1L1Q8N3D4 1523 aa19.21■□□□□ 0.67
SNRPF-205ENST00000553192 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
SNRPF-205ENST00000553192 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
SNRPF-205ENST00000553192 CFAP65Q6ZU64 1925 aaKnown RBP19.21■□□□□ 0.67
SNRPF-205ENST00000553192 PIK3C2BO00750 1634 aa19.21■□□□□ 0.67
SNRPF-205ENST00000553192 CEP152O94986 1710 aa19.2■□□□□ 0.66
SNRPF-205ENST00000553192 ARHGAP31Q2M1Z3 1444 aa19.2■□□□□ 0.66
SNRPF-205ENST00000553192 ARHGEF5Q12774 1597 aa19.19■□□□□ 0.66
SNRPF-205ENST00000553192 RGS12O14924 1447 aa19.18■□□□□ 0.66
SNRPF-205ENST00000553192 EIF2AK4Q9P2K8 1649 aaKnown RBP19.17■□□□□ 0.66
SNRPF-205ENST00000553192 SHPRHQ149N8 1683 aa19.16■□□□□ 0.66
SNRPF-205ENST00000553192 AFF2P51816 1311 aa19.16■□□□□ 0.66
SNRPF-205ENST00000553192 EFCAB6Q5THR3 1501 aa19.15■□□□□ 0.66
SNRPF-205ENST00000553192 AHDC1Q5TGY3 1603 aaPredicted RBP19.15■□□□□ 0.66
SNRPF-205ENST00000553192 IDI1Q13907 227 aa19.15■□□□□ 0.66
SNRPF-205ENST00000553192 STAG3Q9UJ98 1225 aa19.14■□□□□ 0.65
SNRPF-205ENST00000553192 NUTM2BA6NNL0 878 aaPredicted RBP19.13■□□□□ 0.65
SNRPF-205ENST00000553192 NUTM2EB1AL46 878 aaPredicted RBP19.13■□□□□ 0.65
SNRPF-205ENST00000553192 NUTM2AQ8IVF1 878 aaPredicted RBP19.13■□□□□ 0.65
SNRPF-205ENST00000553192 MAST1Q9Y2H9 1570 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms