RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
SNRPF-205ENST00000553192 ABCC9O60706 1549 aa28.95■■■□□ 2.23
SNRPF-205ENST00000553192 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
SNRPF-205ENST00000553192 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
SNRPF-205ENST00000553192 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
SNRPF-205ENST00000553192 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
SNRPF-205ENST00000553192 NACADO15069 1562 aa26.7■■□□□ 1.86
SNRPF-205ENST00000553192 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
SNRPF-205ENST00000553192 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
SNRPF-205ENST00000553192 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
SNRPF-205ENST00000553192 DNAJC5Q9H3Z4 198 aa26.36■■□□□ 1.81
SNRPF-205ENST00000553192 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
SNRPF-205ENST00000553192 CC2D2AQ9P2K1 1620 aa26.07■■□□□ 1.76
SNRPF-205ENST00000553192 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
SNRPF-205ENST00000553192 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
SNRPF-205ENST00000553192 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
SNRPF-205ENST00000553192 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
SNRPF-205ENST00000553192 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
SNRPF-205ENST00000553192 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
SNRPF-205ENST00000553192 CUX2O14529 1486 aa25.27■■□□□ 1.64
SNRPF-205ENST00000553192 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
SNRPF-205ENST00000553192 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
SNRPF-205ENST00000553192 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
SNRPF-205ENST00000553192 NESP48681 1621 aa24.64■■□□□ 1.54
SNRPF-205ENST00000553192 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
SNRPF-205ENST00000553192 THOC2Q8NI27 1593 aaKnown RBP24.51■■□□□ 1.51
SNRPF-205ENST00000553192 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
SNRPF-205ENST00000553192 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
SNRPF-205ENST00000553192 LAMC3Q9Y6N6 1575 aa24.23■■□□□ 1.47
SNRPF-205ENST00000553192 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
SNRPF-205ENST00000553192 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
SNRPF-205ENST00000553192 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
SNRPF-205ENST00000553192 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
SNRPF-205ENST00000553192 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
SNRPF-205ENST00000553192 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
SNRPF-205ENST00000553192 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
SNRPF-205ENST00000553192 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
SNRPF-205ENST00000553192 WDR62O43379 1518 aa23.98■■□□□ 1.43
SNRPF-205ENST00000553192 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
SNRPF-205ENST00000553192 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
SNRPF-205ENST00000553192 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
SNRPF-205ENST00000553192 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
SNRPF-205ENST00000553192 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
SNRPF-205ENST00000553192 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
SNRPF-205ENST00000553192 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
SNRPF-205ENST00000553192 ARHGEF11O15085 1522 aa23.62■■□□□ 1.37
SNRPF-205ENST00000553192 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
SNRPF-205ENST00000553192 CYB5RLQ6IPT4 315 aa23.51■■□□□ 1.35
SNRPF-205ENST00000553192 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
SNRPF-205ENST00000553192 CFTRP13569 1480 aa23.47■■□□□ 1.35
SNRPF-205ENST00000553192 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
SNRPF-205ENST00000553192 WIZO95785 1651 aa23.41■■□□□ 1.34
SNRPF-205ENST00000553192 ZNF608Q9ULD9 1512 aaPredicted RBP23.4■■□□□ 1.34
SNRPF-205ENST00000553192 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
SNRPF-205ENST00000553192 IFT140Q96RY7 1462 aa23.29■■□□□ 1.32
SNRPF-205ENST00000553192 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
SNRPF-205ENST00000553192 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.3
SNRPF-205ENST00000553192 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
SNRPF-205ENST00000553192 CHD1O14646 1710 aa23.1■■□□□ 1.29
SNRPF-205ENST00000553192 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.282e-6■■□□□ 11.9
SNRPF-205ENST00000553192 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
SNRPF-205ENST00000553192 FBLN2P98095 1184 aa23.03■■□□□ 1.28
SNRPF-205ENST00000553192 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
SNRPF-205ENST00000553192 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
SNRPF-205ENST00000553192 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
SNRPF-205ENST00000553192 CLASP1Q7Z460 1538 aa22.9■■□□□ 1.26
SNRPF-205ENST00000553192 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
SNRPF-205ENST00000553192 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
SNRPF-205ENST00000553192 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
SNRPF-205ENST00000553192 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
SNRPF-205ENST00000553192 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
SNRPF-205ENST00000553192 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
SNRPF-205ENST00000553192 SYNJ1O43426 1573 aa22.73■■□□□ 1.23
SNRPF-205ENST00000553192 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
SNRPF-205ENST00000553192 GAPVD1Q14C86 1478 aa22.72■■□□□ 1.23
SNRPF-205ENST00000553192 SOGA1O94964 1423 aa22.68■■□□□ 1.22
SNRPF-205ENST00000553192 ILDR1Q86SU0 546 aaPredicted RBP22.65■■□□□ 1.22
SNRPF-205ENST00000553192 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
SNRPF-205ENST00000553192 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
SNRPF-205ENST00000553192 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
SNRPF-205ENST00000553192 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
SNRPF-205ENST00000553192 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
SNRPF-205ENST00000553192 ERCC6L2Q5T890 1561 aa22.52■■□□□ 1.2
SNRPF-205ENST00000553192 KDM4FA0A1W2PPD8 638 aa22.44■■□□□ 1.18
SNRPF-205ENST00000553192 KIF13AQ9H1H9 1805 aa22.39■■□□□ 1.17
SNRPF-205ENST00000553192 CUX1P39880 1505 aa22.38■■□□□ 1.17
SNRPF-205ENST00000553192 CEP170Q5SW79 1584 aa22.33■■□□□ 1.17
SNRPF-205ENST00000553192 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
SNRPF-205ENST00000553192 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
SNRPF-205ENST00000553192 NUP160Q12769 1436 aa22.28■■□□□ 1.16
SNRPF-205ENST00000553192 FAM69CQ0P6D2 419 aa22.25■■□□□ 1.15
SNRPF-205ENST00000553192 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
SNRPF-205ENST00000553192 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
SNRPF-205ENST00000553192 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
SNRPF-205ENST00000553192 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
SNRPF-205ENST00000553192 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
SNRPF-205ENST00000553192 KDM6BO15054 1643 aa22.13■■□□□ 1.13
SNRPF-205ENST00000553192 DIP2BQ9P265 1576 aa22.12■■□□□ 1.13
SNRPF-205ENST00000553192 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
SNRPF-205ENST00000553192 MAPKBP1O60336 1514 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms