RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 RAPGEF2Q9Y4G8 1499 aa7.24□□□□□ -1.25
PFDN5-219ENST00000553171 LRRC7Q96NW7 1537 aa7.24□□□□□ -1.25
PFDN5-219ENST00000553171 AKT1S1Q96B36 256 aa7.23□□□□□ -1.25
PFDN5-219ENST00000553171 EFCAB5A4FU69 1503 aa7.22□□□□□ -1.25
PFDN5-219ENST00000553171 ZFYVE16Q7Z3T8 1539 aa7.22□□□□□ -1.25
PFDN5-219ENST00000553171 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
PFDN5-219ENST00000553171 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
PFDN5-219ENST00000553171 RICTORQ6R327 1708 aa7.21□□□□□ -1.25
PFDN5-219ENST00000553171 LHX8Q68G74 356 aa7.21□□□□□ -1.26
PFDN5-219ENST00000553171 VSIG10Q8N0Z9 540 aa7.21□□□□□ -1.26
PFDN5-219ENST00000553171 DISP1Q96F81 1524 aa7.21□□□□□ -1.26
PFDN5-219ENST00000553171 ABCA9Q8IUA7 1624 aa7.2□□□□□ -1.26
PFDN5-219ENST00000553171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.2□□□□□ -1.26
PFDN5-219ENST00000553171 FXR2P51116 673 aaKnown RBP eCLIP7.2□□□□□ -1.26
PFDN5-219ENST00000553171 C1QTNF8P60827 252 aa7.2□□□□□ -1.26
PFDN5-219ENST00000553171 POLA2Q14181 598 aa7.2□□□□□ -1.26
PFDN5-219ENST00000553171 HNRNPUL2Q1KMD3 747 aaKnown RBP7.2□□□□□ -1.26
PFDN5-219ENST00000553171 REM2Q8IYK8 340 aaPredicted RBP7.2□□□□□ -1.26
PFDN5-219ENST00000553171 ANP32EQ9BTT0 268 aa7.2□□□□□ -1.26
PFDN5-219ENST00000553171 FAM135BQ49AJ0 1406 aa7.19□□□□□ -1.26
PFDN5-219ENST00000553171 C3P01024 1663 aa7.19□□□□□ -1.26
PFDN5-219ENST00000553171 ATP10AO60312 1499 aa7.19□□□□□ -1.26
PFDN5-219ENST00000553171 ZNF326Q5BKZ1 582 aaKnown RBP7.19□□□□□ -1.26
PFDN5-219ENST00000553171 SAMD1Q6SPF0 538 aaPredicted RBP7.19□□□□□ -1.26
PFDN5-219ENST00000553171 NPATQ14207 1427 aa7.18□□□□□ -1.26
PFDN5-219ENST00000553171 CEP350Q5VT06 3117 aa7.17□□□□□ -1.26
PFDN5-219ENST00000553171 C9orf84Q5VXU9 1444 aa7.17□□□□□ -1.26
PFDN5-219ENST00000553171 PITPNM1O00562 1244 aa7.16□□□□□ -1.26
PFDN5-219ENST00000553171 FGD1P98174 961 aa7.16□□□□□ -1.26
PFDN5-219ENST00000553171 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
PFDN5-219ENST00000553171 RAPGEF6Q8TEU7 1601 aa7.16□□□□□ -1.26
PFDN5-219ENST00000553171 NUTM2BA6NNL0 878 aaPredicted RBP7.15□□□□□ -1.26
PFDN5-219ENST00000553171 NUTM2EB1AL46 878 aaPredicted RBP7.15□□□□□ -1.26
PFDN5-219ENST00000553171 NUTM2DQ5VT03 806 aaPredicted RBP7.15□□□□□ -1.26
PFDN5-219ENST00000553171 NUTM2AQ8IVF1 878 aaPredicted RBP7.15□□□□□ -1.26
PFDN5-219ENST00000553171 SLC4A1APQ9BWU0 796 aaKnown RBP7.15□□□□□ -1.26
PFDN5-219ENST00000553171 VWDEQ8N2E2 1590 aa7.15□□□□□ -1.27
PFDN5-219ENST00000553171 ATAD2Q6PL18 1390 aa7.14□□□□□ -1.27
PFDN5-219ENST00000553171 ZNF784Q8NCA9 323 aaPredicted RBP7.14□□□□□ -1.27
PFDN5-219ENST00000553171 RNF17Q9BXT8 1623 aaKnown RBP7.14□□□□□ -1.27
PFDN5-219ENST00000553171 JCADQ9P266 1359 aa7.13□□□□□ -1.27
PFDN5-219ENST00000553171 HECW1Q76N89 1606 aa7.12□□□□□ -1.27
PFDN5-219ENST00000553171 RGS12O14924 1447 aa7.12□□□□□ -1.27
PFDN5-219ENST00000553171 SUPT5HO00267 1087 aaKnown RBP7.12□□□□□ -1.27
PFDN5-219ENST00000553171 ERICH6BQ5W0A0 696 aa7.12□□□□□ -1.27
PFDN5-219ENST00000553171 ESF1Q9H501 851 aaKnown RBP7.12□□□□□ -1.27
PFDN5-219ENST00000553171 BCCIPQ9P287 314 aaKnown RBP eCLIP7.11□□□□□ -1.27
PFDN5-219ENST00000553171 NHSL1Q5SYE7 1610 aa7.11□□□□□ -1.27
PFDN5-219ENST00000553171 IQGAP2Q13576 1575 aa7.11□□□□□ -1.27
PFDN5-219ENST00000553171 CNTLNQ9NXG0 1405 aa7.1□□□□□ -1.27
PFDN5-219ENST00000553171 IGF1RP08069 1367 aa7.1□□□□□ -1.27
PFDN5-219ENST00000553171 SPATA31A6Q5VVP1 1343 aa7.1□□□□□ -1.27
PFDN5-219ENST00000553171 RBM6P78332 1123 aaKnown RBP7.1□□□□□ -1.27
PFDN5-219ENST00000553171 ZNF142P52746 1687 aaPredicted RBP7.09□□□□□ -1.27
PFDN5-219ENST00000553171 LRP6O75581 1613 aa7.09□□□□□ -1.27
PFDN5-219ENST00000553171 ABCA8O94911 1581 aa7.09□□□□□ -1.27
PFDN5-219ENST00000553171 RSPH4AQ5TD94 716 aa7.09□□□□□ -1.27
PFDN5-219ENST00000553171 MEX3CQ5U5Q3 659 aaKnown RBP7.09□□□□□ -1.27
PFDN5-219ENST00000553171 DHX37Q8IY37 1157 aaKnown RBP7.09□□□□□ -1.27
PFDN5-219ENST00000553171 BCL11BQ9C0K0 894 aaPredicted RBP7.09□□□□□ -1.27
PFDN5-219ENST00000553171 NEURL4Q96JN8 1562 aa7.08□□□□□ -1.28
PFDN5-219ENST00000553171 AGLP35573 1532 aa7.08□□□□□ -1.28
PFDN5-219ENST00000553171 UBTFP17480 764 aaKnown RBP7.08□□□□□ -1.28
PFDN5-219ENST00000553171 ANO8Q9HCE9 1232 aaPredicted RBP7.08□□□□□ -1.28
PFDN5-219ENST00000553171 CEP170BQ9Y4F5 1589 aaPredicted RBP7.08□□□□□ -1.28
PFDN5-219ENST00000553171 UGGT2Q9NYU1 1516 aa7.07□□□□□ -1.28
PFDN5-219ENST00000553171 ZMYM3Q14202 1370 aa7.07□□□□□ -1.28
PFDN5-219ENST00000553171 CDK13Q14004 1512 aaKnown RBP7.06□□□□□ -1.28
PFDN5-219ENST00000553171 ATP10BO94823 1461 aa7.06□□□□□ -1.28
PFDN5-219ENST00000553171 PRELPP51888 382 aa7.06□□□□□ -1.28
PFDN5-219ENST00000553171 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
PFDN5-219ENST00000553171 GABBR2O75899 941 aa7.05□□□□□ -1.28
PFDN5-219ENST00000553171 QTRT2Q9H974 415 aaKnown RBP7.05□□□□□ -1.28
PFDN5-219ENST00000553171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.05□□□□□ -1.28
PFDN5-219ENST00000553171 STRCP1A6NGW2 1772 aa7.05□□□□□ -1.28
PFDN5-219ENST00000553171 CLSPNQ9HAW4 1339 aa7.04□□□□□ -1.28
PFDN5-219ENST00000553171 SYNMO15061 1565 aa7.04□□□□□ -1.28
PFDN5-219ENST00000553171 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
PFDN5-219ENST00000553171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.04□□□□□ -1.28
PFDN5-219ENST00000553171 MYO3AQ8NEV4 1616 aa7.04□□□□□ -1.28
PFDN5-219ENST00000553171 MED14O60244 1454 aa7.04□□□□□ -1.28
PFDN5-219ENST00000553171 BCL9LQ86UU0 1499 aa7.04□□□□□ -1.28
PFDN5-219ENST00000553171 AFF2P51816 1311 aa7.03□□□□□ -1.28
PFDN5-219ENST00000553171 SCAPERQ9BY12 1400 aa7.03□□□□□ -1.28
PFDN5-219ENST00000553171 BIVM-ERCC5R4GMW8 1640 aa7.03□□□□□ -1.28
PFDN5-219ENST00000553171 PUS7Q96PZ0 661 aaKnown RBP7.03□□□□□ -1.28
PFDN5-219ENST00000553171 MYT1LQ9UL68 1186 aa7.03□□□□□ -1.28
PFDN5-219ENST00000553171 A2ML1A8K2U0 1454 aa7.03□□□□□ -1.28
PFDN5-219ENST00000553171 CFAP74Q9C0B2 1584 aa7.03□□□□□ -1.28
PFDN5-219ENST00000553171 FGD6Q6ZV73 1430 aa7.02□□□□□ -1.29
PFDN5-219ENST00000553171 NGLY1Q96IV0 654 aa7.02□□□□□ -1.29
PFDN5-219ENST00000553171 CCDC9Q9Y3X0 531 aaKnown RBP7.02□□□□□ -1.29
PFDN5-219ENST00000553171 EP400Q96L91 3159 aa7.02□□□□□ -1.29
PFDN5-219ENST00000553171 REREQ9P2R6 1566 aa7.02□□□□□ -1.29
PFDN5-219ENST00000553171 ROBO1Q9Y6N7 1651 aa7.02□□□□□ -1.29
PFDN5-219ENST00000553171 NPHP4O75161 1426 aaPredicted RBP7.01□□□□□ -1.29
PFDN5-219ENST00000553171 DNMT1P26358 1616 aaKnown RBP7.01□□□□□ -1.29
PFDN5-219ENST00000553171 POLR1AO95602 1720 aaPredicted RBP7.01□□□□□ -1.29
PFDN5-219ENST00000553171 PSDA5PKW4 1024 aaPredicted RBP7.01□□□□□ -1.29
PFDN5-219ENST00000553171 RSPH6AQ9H0K4 717 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms