RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 BCORL1Q5H9F3 1711 aa25.65■■□□□ 1.7
ITGA5-213ENST00000553071 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
ITGA5-213ENST00000553071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.62■■□□□ 1.69
ITGA5-213ENST00000553071 FAM135AQ9P2D6 1515 aa25.61■■□□□ 1.69
ITGA5-213ENST00000553071 CNTLNQ9NXG0 1405 aa25.61■■□□□ 1.69
ITGA5-213ENST00000553071 GCC2Q8IWJ2 1684 aa25.6■■□□□ 1.69
ITGA5-213ENST00000553071 RNF17Q9BXT8 1623 aaKnown RBP25.58■■□□□ 1.69
ITGA5-213ENST00000553071 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
ITGA5-213ENST00000553071 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
ITGA5-213ENST00000553071 NUP155O75694 1391 aa25.56■■□□□ 1.68
ITGA5-213ENST00000553071 PCGF6Q9BYE7 350 aa25.54■■□□□ 1.68
ITGA5-213ENST00000553071 RAB3GAP2Q9H2M9 1393 aa25.54■■□□□ 1.68
ITGA5-213ENST00000553071 PRDM15P57071 1507 aaPredicted RBP25.53■■□□□ 1.68
ITGA5-213ENST00000553071 KDM5DQ9BY66 1539 aa25.52■■□□□ 1.68
ITGA5-213ENST00000553071 DEPDC5O75140 1603 aa25.52■■□□□ 1.68
ITGA5-213ENST00000553071 ADAMTSL3P82987 1691 aa25.52■■□□□ 1.68
ITGA5-213ENST00000553071 KDM4FA0A1W2PPD8 638 aa25.51■■□□□ 1.67
ITGA5-213ENST00000553071 UNC13BO14795 1591 aa25.48■■□□□ 1.67
ITGA5-213ENST00000553071 ZMYM3Q14202 1370 aa25.48■■□□□ 1.67
ITGA5-213ENST00000553071 MROH1Q8NDA8 1641 aa25.47■■□□□ 1.67
ITGA5-213ENST00000553071 LMTK2Q8IWU2 1503 aa25.46■■□□□ 1.67
ITGA5-213ENST00000553071 VWDEQ8N2E2 1590 aa25.45■■□□□ 1.66
ITGA5-213ENST00000553071 ABCC3O15438 1527 aa25.45■■□□□ 1.66
ITGA5-213ENST00000553071 ZC3H13Q5T200 1668 aaKnown RBP25.45■■□□□ 1.66
ITGA5-213ENST00000553071 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
ITGA5-213ENST00000553071 MADDQ8WXG6 1647 aa25.43■■□□□ 1.66
ITGA5-213ENST00000553071 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
ITGA5-213ENST00000553071 FER1L4A9Z1Z3 1794 aa25.43■■□□□ 1.66
ITGA5-213ENST00000553071 MPHOSPH9Q99550 1183 aa25.4■■□□□ 1.66
ITGA5-213ENST00000553071 PTPRMP28827 1452 aa25.4■■□□□ 1.66
ITGA5-213ENST00000553071 MROH2AA6NES4 1674 aa25.39■■□□□ 1.66
ITGA5-213ENST00000553071 IQGAP3Q86VI3 1631 aa25.39■■□□□ 1.66
ITGA5-213ENST00000553071 CLTCQ00610 1675 aaKnown RBP25.38■■□□□ 1.65
ITGA5-213ENST00000553071 RPRD2Q5VT52 1461 aaKnown RBP25.37■■□□□ 1.65
ITGA5-213ENST00000553071 RIMS1Q86UR5 1692 aaKnown RBP25.36■■□□□ 1.65
ITGA5-213ENST00000553071 PZPP20742 1482 aa25.36■■□□□ 1.65
ITGA5-213ENST00000553071 CEBPAP49715 358 aaPredicted RBP25.35■■□□□ 1.65
ITGA5-213ENST00000553071 PKD2Q13563 968 aa25.35■■□□□ 1.65
ITGA5-213ENST00000553071 NPATQ14207 1427 aa25.34■■□□□ 1.65
ITGA5-213ENST00000553071 TET3O43151 1660 aa25.33■■□□□ 1.65
ITGA5-213ENST00000553071 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
ITGA5-213ENST00000553071 PLPPR3Q6T4P5 718 aa25.32■■□□□ 1.64
ITGA5-213ENST00000553071 CAMSAP1Q5T5Y3 1602 aa25.31■■□□□ 1.64
ITGA5-213ENST00000553071 CEP152O94986 1710 aa25.31■■□□□ 1.64
ITGA5-213ENST00000553071 FBXO31Q5XUX0 539 aaPredicted RBP25.29■■□□□ 1.64
ITGA5-213ENST00000553071 SLC52A1Q9NWF4 448 aa25.27■■□□□ 1.64
ITGA5-213ENST00000553071 C3P01024 1663 aa25.26■■□□□ 1.63
ITGA5-213ENST00000553071 TNRQ92752 1358 aa25.26■■□□□ 1.63
ITGA5-213ENST00000553071 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
ITGA5-213ENST00000553071 SETD1BQ9UPS6 1966 aaKnown RBP25.24■■□□□ 1.63
ITGA5-213ENST00000553071 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
ITGA5-213ENST00000553071 NOS1P29475 1434 aa25.23■■□□□ 1.63
ITGA5-213ENST00000553071 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
ITGA5-213ENST00000553071 PTPRTO14522 1441 aa25.2■■□□□ 1.63
ITGA5-213ENST00000553071 E9PCH4 1651 aa25.19■■□□□ 1.62
ITGA5-213ENST00000553071 NLRP1Q9C000 1473 aa25.18■■□□□ 1.62
ITGA5-213ENST00000553071 FOXD1Q16676 465 aa25.16■■□□□ 1.62
ITGA5-213ENST00000553071 UHRF1BP1Q6BDS2 1440 aa25.16■■□□□ 1.62
ITGA5-213ENST00000553071 PREX1Q8TCU6 1659 aa25.16■■□□□ 1.62
ITGA5-213ENST00000553071 IDI1Q13907 227 aa25.14■■□□□ 1.62
ITGA5-213ENST00000553071 STAG3Q9UJ98 1225 aa25.14■■□□□ 1.62
ITGA5-213ENST00000553071 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
ITGA5-213ENST00000553071 CFAP65Q6ZU64 1925 aaKnown RBP25.12■■□□□ 1.61
ITGA5-213ENST00000553071 ANKRD30BQ9BXX2 1392 aa25.11■■□□□ 1.61
ITGA5-213ENST00000553071 THEMISQ8N1K5 641 aaPredicted RBP25.11■■□□□ 1.61
ITGA5-213ENST00000553071 CCDC144AA2RUR9 1427 aa25.11■■□□□ 1.61
ITGA5-213ENST00000553071 TRPM2O94759 1503 aa25.1■■□□□ 1.61
ITGA5-213ENST00000553071 PLA2R1Q13018 1463 aa25.09■■□□□ 1.61
ITGA5-213ENST00000553071 A2ML1A8K2U0 1454 aa25.09■■□□□ 1.61
ITGA5-213ENST00000553071 SPHKAPQ2M3C7 1700 aa25.07■■□□□ 1.6
ITGA5-213ENST00000553071 SYNMO15061 1565 aa25.06■■□□□ 1.6
ITGA5-213ENST00000553071 HDGFP51858 240 aaKnown RBP25.06■■□□□ 1.6
ITGA5-213ENST00000553071 CLSPNQ9HAW4 1339 aa25.06■■□□□ 1.6
ITGA5-213ENST00000553071 CHGAP10645 457 aaKnown RBP25.05■■□□□ 1.6
ITGA5-213ENST00000553071 MYO3AQ8NEV4 1616 aa25.02■■□□□ 1.6
ITGA5-213ENST00000553071 UGGT1Q9NYU2 1555 aa25.01■■□□□ 1.59
ITGA5-213ENST00000553071 CCER1Q8TC90 406 aaPredicted RBP25.01■■□□□ 1.59
ITGA5-213ENST00000553071 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
ITGA5-213ENST00000553071 PIK3C2BO00750 1634 aa25.01■■□□□ 1.59
ITGA5-213ENST00000553071 RPGRIP1LQ68CZ1 1315 aa24.97■■□□□ 1.59
ITGA5-213ENST00000553071 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.97■■□□□ 1.59
ITGA5-213ENST00000553071 EID1Q9Y6B2 187 aa24.97■■□□□ 1.59
ITGA5-213ENST00000553071 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
ITGA5-213ENST00000553071 LMTK3Q96Q04 1460 aa24.96■■□□□ 1.59
ITGA5-213ENST00000553071 ZNF326Q5BKZ1 582 aaKnown RBP24.96■■□□□ 1.59
ITGA5-213ENST00000553071 ZNF142P52746 1687 aaPredicted RBP24.96■■□□□ 1.59
ITGA5-213ENST00000553071 ANKLE2Q86XL3 938 aa24.95■■□□□ 1.58
ITGA5-213ENST00000553071 ADGRB3O60242 1522 aa24.95■■□□□ 1.58
ITGA5-213ENST00000553071 CLTCL1P53675 1640 aa24.94■■□□□ 1.58
ITGA5-213ENST00000553071 STAC3Q96MF2 364 aa24.94■■□□□ 1.58
ITGA5-213ENST00000553071 TMEM2Q9UHN6 1383 aa24.93■■□□□ 1.58
ITGA5-213ENST00000553071 NEURL4Q96JN8 1562 aa24.92■■□□□ 1.58
ITGA5-213ENST00000553071 TMEM131LA2VDJ0 1609 aa24.9■■□□□ 1.58
ITGA5-213ENST00000553071 HSPA2P54652 639 aa24.9■■□□□ 1.58
ITGA5-213ENST00000553071 RGL3Q3MIN7 710 aa24.9■■□□□ 1.58
ITGA5-213ENST00000553071 KIF1BO60333 1816 aa24.9■■□□□ 1.58
ITGA5-213ENST00000553071 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.58
ITGA5-213ENST00000553071 VGFO15240 615 aaPredicted RBP24.89■■□□□ 1.58
ITGA5-213ENST00000553071 NEUROD1Q13562 356 aa24.89■■□□□ 1.58
ITGA5-213ENST00000553071 TXNDC2Q86VQ3 553 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms