RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.12
CTDSP2-207ENST00000551594 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
CTDSP2-207ENST00000551594 MROH1Q8NDA8 1641 aa28.31■■■□□ 2.12
CTDSP2-207ENST00000551594 PLPPR3Q6T4P5 718 aa28.3■■■□□ 2.12
CTDSP2-207ENST00000551594 CLTCQ00610 1675 aaKnown RBP28.29■■■□□ 2.12
CTDSP2-207ENST00000551594 GCC2Q8IWJ2 1684 aa28.29■■■□□ 2.12
CTDSP2-207ENST00000551594 PTPRMP28827 1452 aa28.27■■■□□ 2.12
CTDSP2-207ENST00000551594 HFM1A2PYH4 1435 aa28.27■■■□□ 2.12
CTDSP2-207ENST00000551594 PPP6R1Q9UPN7 881 aa28.27■■■□□ 2.12
CTDSP2-207ENST00000551594 DEPDC5O75140 1603 aa28.26■■■□□ 2.11
CTDSP2-207ENST00000551594 WASHC2CQ9Y4E1 1318 aa28.25■■■□□ 2.11
CTDSP2-207ENST00000551594 CEBPAP49715 358 aaPredicted RBP28.25■■■□□ 2.11
CTDSP2-207ENST00000551594 CNTLNQ9NXG0 1405 aa28.23■■■□□ 2.11
CTDSP2-207ENST00000551594 PRDM15P57071 1507 aaPredicted RBP28.23■■■□□ 2.11
CTDSP2-207ENST00000551594 KDM5DQ9BY66 1539 aa28.22■■■□□ 2.11
CTDSP2-207ENST00000551594 CEP152O94986 1710 aa28.21■■■□□ 2.11
CTDSP2-207ENST00000551594 ABCC3O15438 1527 aa28.2■■■□□ 2.1
CTDSP2-207ENST00000551594 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
CTDSP2-207ENST00000551594 ZMYM3Q14202 1370 aa28.19■■■□□ 2.1
CTDSP2-207ENST00000551594 MROH2AA6NES4 1674 aa28.19■■■□□ 2.1
CTDSP2-207ENST00000551594 C3P01024 1663 aa28.19■■■□□ 2.1
CTDSP2-207ENST00000551594 KANK1Q14678 1352 aa28.18■■■□□ 2.1
CTDSP2-207ENST00000551594 UNC13BO14795 1591 aa28.18■■■□□ 2.1
CTDSP2-207ENST00000551594 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
CTDSP2-207ENST00000551594 FAM135AQ9P2D6 1515 aa28.16■■■□□ 2.1
CTDSP2-207ENST00000551594 VWDEQ8N2E2 1590 aa28.16■■■□□ 2.1
CTDSP2-207ENST00000551594 ZC3H13Q5T200 1668 aaKnown RBP28.15■■■□□ 2.1
CTDSP2-207ENST00000551594 SETD5Q9C0A6 1442 aa28.15■■■□□ 2.1
CTDSP2-207ENST00000551594 NUP155O75694 1391 aa28.12■■■□□ 2.09
CTDSP2-207ENST00000551594 CAMSAP1Q5T5Y3 1602 aa28.11■■■□□ 2.09
CTDSP2-207ENST00000551594 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
CTDSP2-207ENST00000551594 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
CTDSP2-207ENST00000551594 FBXO31Q5XUX0 539 aaPredicted RBP28.08■■■□□ 2.09
CTDSP2-207ENST00000551594 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.08
CTDSP2-207ENST00000551594 RAB3GAP2Q9H2M9 1393 aa28.07■■■□□ 2.08
CTDSP2-207ENST00000551594 IQGAP3Q86VI3 1631 aa28.07■■■□□ 2.08
CTDSP2-207ENST00000551594 PZPP20742 1482 aa28.05■■■□□ 2.08
CTDSP2-207ENST00000551594 TET3O43151 1660 aa28.02■■■□□ 2.08
CTDSP2-207ENST00000551594 EFCAB6Q5THR3 1501 aa28.02■■■□□ 2.08
CTDSP2-207ENST00000551594 NPATQ14207 1427 aa28.01■■■□□ 2.07
CTDSP2-207ENST00000551594 ARHGAP31Q2M1Z3 1444 aa28.01■■■□□ 2.07
CTDSP2-207ENST00000551594 SETD1BQ9UPS6 1966 aaKnown RBP28■■■□□ 2.07
CTDSP2-207ENST00000551594 E9PCH4 1651 aa27.96■■■□□ 2.07
CTDSP2-207ENST00000551594 PREX1Q8TCU6 1659 aa27.96■■■□□ 2.07
CTDSP2-207ENST00000551594 ERVK-7P63135 1459 aa27.95■■■□□ 2.07
CTDSP2-207ENST00000551594 TNRQ92752 1358 aa27.94■■■□□ 2.06
CTDSP2-207ENST00000551594 SLC4A1APQ9BWU0 796 aaKnown RBP27.93■■■□□ 2.06
CTDSP2-207ENST00000551594 SPATA31D1Q6ZQQ2 1576 aa27.93■■■□□ 2.06
CTDSP2-207ENST00000551594 HRCP23327 699 aa27.91■■■□□ 2.06
CTDSP2-207ENST00000551594 PKD2Q13563 968 aa27.9■■■□□ 2.06
CTDSP2-207ENST00000551594 RPRD2Q5VT52 1461 aaKnown RBP27.89■■■□□ 2.06
CTDSP2-207ENST00000551594 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
CTDSP2-207ENST00000551594 UHRF1BP1Q6BDS2 1440 aa27.88■■■□□ 2.05
CTDSP2-207ENST00000551594 MYO3AQ8NEV4 1616 aa27.88■■■□□ 2.05
CTDSP2-207ENST00000551594 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
CTDSP2-207ENST00000551594 ACIN1Q9UKV3 1341 aaKnown RBP27.87■■■□□ 2.05
CTDSP2-207ENST00000551594 NOS1P29475 1434 aa27.86■■■□□ 2.05
CTDSP2-207ENST00000551594 LMTK3Q96Q04 1460 aa27.86■■■□□ 2.05
CTDSP2-207ENST00000551594 SYNMO15061 1565 aa27.86■■■□□ 2.05
CTDSP2-207ENST00000551594 FOXD1Q16676 465 aa27.85■■■□□ 2.05
CTDSP2-207ENST00000551594 HSPA2P54652 639 aa27.82■■■□□ 2.04
CTDSP2-207ENST00000551594 CEP170BQ9Y4F5 1589 aaPredicted RBP27.8■■■□□ 2.04
CTDSP2-207ENST00000551594 SPHKAPQ2M3C7 1700 aa27.79■■■□□ 2.04
CTDSP2-207ENST00000551594 A2ML1A8K2U0 1454 aa27.78■■■□□ 2.04
CTDSP2-207ENST00000551594 NLRP1Q9C000 1473 aa27.78■■■□□ 2.04
CTDSP2-207ENST00000551594 IDI1Q13907 227 aa27.78■■■□□ 2.04
CTDSP2-207ENST00000551594 ZNF142P52746 1687 aaPredicted RBP27.78■■■□□ 2.04
CTDSP2-207ENST00000551594 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
CTDSP2-207ENST00000551594 PTPRTO14522 1441 aa27.76■■■□□ 2.04
CTDSP2-207ENST00000551594 PLA2R1Q13018 1463 aa27.75■■■□□ 2.03
CTDSP2-207ENST00000551594 PIK3C2BO00750 1634 aa27.74■■■□□ 2.03
CTDSP2-207ENST00000551594 SLC52A1Q9NWF4 448 aa27.74■■■□□ 2.03
CTDSP2-207ENST00000551594 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.02
CTDSP2-207ENST00000551594 TRPM2O94759 1503 aa27.69■■■□□ 2.02
CTDSP2-207ENST00000551594 STAG3Q9UJ98 1225 aa27.68■■■□□ 2.02
CTDSP2-207ENST00000551594 CLTCL1P53675 1640 aa27.67■■■□□ 2.02
CTDSP2-207ENST00000551594 CHGAP10645 457 aaKnown RBP27.66■■■□□ 2.02
CTDSP2-207ENST00000551594 THEMISQ8N1K5 641 aaPredicted RBP27.66■■■□□ 2.02
CTDSP2-207ENST00000551594 MYO5BQ9ULV0 1848 aa27.65■■■□□ 2.02
CTDSP2-207ENST00000551594 ADGRB3O60242 1522 aa27.63■■■□□ 2.01
CTDSP2-207ENST00000551594 TMEM131LA2VDJ0 1609 aa27.62■■■□□ 2.01
CTDSP2-207ENST00000551594 ANKRD30BQ9BXX2 1392 aa27.6■■■□□ 2.01
CTDSP2-207ENST00000551594 KDM5AP29375 1690 aaKnown RBP27.59■■■□□ 2.01
CTDSP2-207ENST00000551594 STRCQ7RTU9 1775 aa27.59■■■□□ 2.01
CTDSP2-207ENST00000551594 NCKAP5LQ9HCH0 1330 aa27.59■■■□□ 2.01
CTDSP2-207ENST00000551594 DHX57Q6P158 1386 aaKnown RBP27.58■■■□□ 2.01
CTDSP2-207ENST00000551594 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2
CTDSP2-207ENST00000551594 KIF1BO60333 1816 aa27.57■■■□□ 2
CTDSP2-207ENST00000551594 TMEM2Q9UHN6 1383 aa27.54■■■□□ 2
CTDSP2-207ENST00000551594 ARHGAP23Q9P227 1491 aa27.53■■■□□ 2
CTDSP2-207ENST00000551594 ANKLE2Q86XL3 938 aa27.53■■■□□ 2
CTDSP2-207ENST00000551594 SLIT1O75093 1534 aa27.52■■■□□ 2
CTDSP2-207ENST00000551594 LTKP29376 864 aa27.52■■■□□ 2
CTDSP2-207ENST00000551594 ZNF326Q5BKZ1 582 aaKnown RBP27.51■■□□□ 1.99
CTDSP2-207ENST00000551594 TXNDC2Q86VQ3 553 aa27.51■■□□□ 1.99
CTDSP2-207ENST00000551594 POLR1AO95602 1720 aaPredicted RBP27.5■■□□□ 1.99
CTDSP2-207ENST00000551594 NUTM2DQ5VT03 806 aaPredicted RBP27.49■■□□□ 1.99
CTDSP2-207ENST00000551594 RIMS2Q9UQ26 1411 aa27.48■■□□□ 1.99
CTDSP2-207ENST00000551594 EID1Q9Y6B2 187 aa27.47■■□□□ 1.99
CTDSP2-207ENST00000551594 NEURL4Q96JN8 1562 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms