RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 GGT6Q6P531 493 aa26.65■■□□□ 1.86
CDK4-207ENST00000550419 ESF1Q9H501 851 aaKnown RBP26.65■■□□□ 1.86
CDK4-207ENST00000550419 RNF17Q9BXT8 1623 aaKnown RBP26.63■■□□□ 1.85
CDK4-207ENST00000550419 MROH2AA6NES4 1674 aa26.6■■□□□ 1.85
CDK4-207ENST00000550419 KDM5DQ9BY66 1539 aa26.56■■□□□ 1.84
CDK4-207ENST00000550419 ANKRD50Q9ULJ7 1429 aa26.56■■□□□ 1.84
CDK4-207ENST00000550419 MROH1Q8NDA8 1641 aa26.55■■□□□ 1.84
CDK4-207ENST00000550419 ITGAEP38570 1179 aa26.55■■□□□ 1.84
CDK4-207ENST00000550419 ZMYM3Q14202 1370 aa26.55■■□□□ 1.84
CDK4-207ENST00000550419 CLTCQ00610 1675 aaKnown RBP26.54■■□□□ 1.84
CDK4-207ENST00000550419 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
CDK4-207ENST00000550419 C3P01024 1663 aa26.54■■□□□ 1.84
CDK4-207ENST00000550419 PRDM15P57071 1507 aaPredicted RBP26.53■■□□□ 1.84
CDK4-207ENST00000550419 WASHC2CQ9Y4E1 1318 aa26.52■■□□□ 1.84
CDK4-207ENST00000550419 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
CDK4-207ENST00000550419 CEBPAP49715 358 aaPredicted RBP26.5■■□□□ 1.83
CDK4-207ENST00000550419 NPATQ14207 1427 aa26.48■■□□□ 1.83
CDK4-207ENST00000550419 ABCC3O15438 1527 aa26.48■■□□□ 1.83
CDK4-207ENST00000550419 KANK1Q14678 1352 aa26.45■■□□□ 1.82
CDK4-207ENST00000550419 VWDEQ8N2E2 1590 aa26.44■■□□□ 1.82
CDK4-207ENST00000550419 PLPPR3Q6T4P5 718 aa26.43■■□□□ 1.82
CDK4-207ENST00000550419 PZPP20742 1482 aa26.42■■□□□ 1.82
CDK4-207ENST00000550419 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
CDK4-207ENST00000550419 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
CDK4-207ENST00000550419 NAIPQ13075 1403 aa26.41■■□□□ 1.82
CDK4-207ENST00000550419 LMTK2Q8IWU2 1503 aa26.41■■□□□ 1.82
CDK4-207ENST00000550419 UNC13BO14795 1591 aa26.4■■□□□ 1.82
CDK4-207ENST00000550419 PREX1Q8TCU6 1659 aa26.39■■□□□ 1.82
CDK4-207ENST00000550419 LMTK3Q96Q04 1460 aa26.39■■□□□ 1.82
CDK4-207ENST00000550419 ARHGAP31Q2M1Z3 1444 aa26.39■■□□□ 1.81
CDK4-207ENST00000550419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDK4-207ENST00000550419 GCC2Q8IWJ2 1684 aa26.38■■□□□ 1.81
CDK4-207ENST00000550419 CAMSAP1Q5T5Y3 1602 aa26.37■■□□□ 1.81
CDK4-207ENST00000550419 CEP152O94986 1710 aa26.36■■□□□ 1.81
CDK4-207ENST00000550419 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
CDK4-207ENST00000550419 FBXO31Q5XUX0 539 aaPredicted RBP26.31■■□□□ 1.8
CDK4-207ENST00000550419 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
CDK4-207ENST00000550419 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
CDK4-207ENST00000550419 TNRQ92752 1358 aa26.29■■□□□ 1.8
CDK4-207ENST00000550419 IQGAP3Q86VI3 1631 aa26.28■■□□□ 1.8
CDK4-207ENST00000550419 NUP155O75694 1391 aa26.27■■□□□ 1.8
CDK4-207ENST00000550419 ERVK-7P63135 1459 aa26.27■■□□□ 1.8
CDK4-207ENST00000550419 RPRD2Q5VT52 1461 aaKnown RBP26.27■■□□□ 1.8
CDK4-207ENST00000550419 TET3O43151 1660 aa26.26■■□□□ 1.79
CDK4-207ENST00000550419 MYO3AQ8NEV4 1616 aa26.26■■□□□ 1.79
CDK4-207ENST00000550419 ZNF142P52746 1687 aaPredicted RBP26.24■■□□□ 1.79
CDK4-207ENST00000550419 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
CDK4-207ENST00000550419 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
CDK4-207ENST00000550419 CEP170BQ9Y4F5 1589 aaPredicted RBP26.21■■□□□ 1.79
CDK4-207ENST00000550419 A2ML1A8K2U0 1454 aa26.21■■□□□ 1.79
CDK4-207ENST00000550419 HSPA2P54652 639 aa26.19■■□□□ 1.78
CDK4-207ENST00000550419 NOS1P29475 1434 aa26.19■■□□□ 1.78
CDK4-207ENST00000550419 SETD5Q9C0A6 1442 aa26.17■■□□□ 1.78
CDK4-207ENST00000550419 E9PCH4 1651 aa26.13■■□□□ 1.77
CDK4-207ENST00000550419 CFAP65Q6ZU64 1925 aaKnown RBP26.11■■□□□ 1.77
CDK4-207ENST00000550419 SYNMO15061 1565 aa26.11■■□□□ 1.77
CDK4-207ENST00000550419 PLA2R1Q13018 1463 aa26.11■■□□□ 1.77
CDK4-207ENST00000550419 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
CDK4-207ENST00000550419 SLC52A1Q9NWF4 448 aa26.1■■□□□ 1.77
CDK4-207ENST00000550419 UGGT1Q9NYU2 1555 aa26.1■■□□□ 1.77
CDK4-207ENST00000550419 THEMISQ8N1K5 641 aaPredicted RBP26.08■■□□□ 1.77
CDK4-207ENST00000550419 HRCP23327 699 aa26.07■■□□□ 1.76
CDK4-207ENST00000550419 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
CDK4-207ENST00000550419 KDM5AP29375 1690 aaKnown RBP26.05■■□□□ 1.76
CDK4-207ENST00000550419 PTPRTO14522 1441 aa26.05■■□□□ 1.76
CDK4-207ENST00000550419 IDI1Q13907 227 aa26.04■■□□□ 1.76
CDK4-207ENST00000550419 STRCQ7RTU9 1775 aa26.04■■□□□ 1.76
CDK4-207ENST00000550419 SLC4A1APQ9BWU0 796 aaKnown RBP26.03■■□□□ 1.76
CDK4-207ENST00000550419 UBR1Q8IWV7 1749 aa26.02■■□□□ 1.76
CDK4-207ENST00000550419 PKD2Q13563 968 aa26.02■■□□□ 1.76
CDK4-207ENST00000550419 DMRT2Q9Y5R5 561 aa26.02■■□□□ 1.76
CDK4-207ENST00000550419 PIK3C2BO00750 1634 aa26.02■■□□□ 1.76
CDK4-207ENST00000550419 SPHKAPQ2M3C7 1700 aa25.98■■□□□ 1.75
CDK4-207ENST00000550419 MPHOSPH9Q99550 1183 aa25.97■■□□□ 1.75
CDK4-207ENST00000550419 ADGRB3O60242 1522 aa25.97■■□□□ 1.75
CDK4-207ENST00000550419 SLIT1O75093 1534 aa25.96■■□□□ 1.75
CDK4-207ENST00000550419 ARHGAP23Q9P227 1491 aa25.96■■□□□ 1.75
CDK4-207ENST00000550419 TRPM2O94759 1503 aa25.95■■□□□ 1.74
CDK4-207ENST00000550419 ANKLE2Q86XL3 938 aa25.95■■□□□ 1.74
CDK4-207ENST00000550419 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
CDK4-207ENST00000550419 STAG3Q9UJ98 1225 aa25.94■■□□□ 1.74
CDK4-207ENST00000550419 NCKAP5LQ9HCH0 1330 aa25.92■■□□□ 1.74
CDK4-207ENST00000550419 TMEM2Q9UHN6 1383 aa25.92■■□□□ 1.74
CDK4-207ENST00000550419 POLR1AO95602 1720 aaPredicted RBP25.91■■□□□ 1.74
CDK4-207ENST00000550419 TMEM131LA2VDJ0 1609 aa25.91■■□□□ 1.74
CDK4-207ENST00000550419 MED14O60244 1454 aa25.91■■□□□ 1.74
CDK4-207ENST00000550419 NEURL4Q96JN8 1562 aa25.89■■□□□ 1.73
CDK4-207ENST00000550419 SCAF11Q99590 1463 aaKnown RBP25.86■■□□□ 1.73
CDK4-207ENST00000550419 EID1Q9Y6B2 187 aa25.85■■□□□ 1.73
CDK4-207ENST00000550419 CLTCL1P53675 1640 aa25.85■■□□□ 1.73
CDK4-207ENST00000550419 NPHP4O75161 1426 aaPredicted RBP25.83■■□□□ 1.73
CDK4-207ENST00000550419 LTKP29376 864 aa25.83■■□□□ 1.73
CDK4-207ENST00000550419 ILDR1Q86SU0 546 aaPredicted RBP25.83■■□□□ 1.73
CDK4-207ENST00000550419 TXNDC2Q86VQ3 553 aa25.83■■□□□ 1.73
CDK4-207ENST00000550419 ZFYVE9O95405 1425 aa25.82■■□□□ 1.72
CDK4-207ENST00000550419 FOXD1Q16676 465 aa25.82■■□□□ 1.72
CDK4-207ENST00000550419 HDGFP51858 240 aaKnown RBP25.81■■□□□ 1.72
CDK4-207ENST00000550419 MYO5BQ9ULV0 1848 aa25.79■■□□□ 1.72
CDK4-207ENST00000550419 CHGAP10645 457 aaKnown RBP25.79■■□□□ 1.72
CDK4-207ENST00000550419 CCDC144AA2RUR9 1427 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms