RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 FANCAO15360 1455 aa14.62□□□□□ -0.07
SMARCC2-208ENST00000550150 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
SMARCC2-208ENST00000550150 AFAP1Q8N556 730 aa14.61□□□□□ -0.07
SMARCC2-208ENST00000550150 NOP58Q9Y2X3 529 aaKnown RBP14.6□□□□□ -0.07
SMARCC2-208ENST00000550150 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
SMARCC2-208ENST00000550150 PLXNC1O60486 1568 aa14.58□□□□□ -0.07
SMARCC2-208ENST00000550150 KIF15Q9NS87 1388 aa14.58□□□□□ -0.07
SMARCC2-208ENST00000550150 UNC13BO14795 1591 aa14.58□□□□□ -0.08
SMARCC2-208ENST00000550150 ARAP3Q8WWN8 1544 aa14.58□□□□□ -0.08
SMARCC2-208ENST00000550150 ANKRD50Q9ULJ7 1429 aa14.58□□□□□ -0.08
SMARCC2-208ENST00000550150 MPHOSPH9Q99550 1183 aa14.58□□□□□ -0.08
SMARCC2-208ENST00000550150 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCC2-208ENST00000550150 ANKRD30AQ9BXX3 1397 aa14.57□□□□□ -0.08
SMARCC2-208ENST00000550150 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
SMARCC2-208ENST00000550150 EFCAB2Q5VUJ9 269 aa14.56□□□□□ -0.08
SMARCC2-208ENST00000550150 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
SMARCC2-208ENST00000550150 ZFYVE16Q7Z3T8 1539 aa14.56□□□□□ -0.08
SMARCC2-208ENST00000550150 ANP32AP39687 249 aaKnown RBP14.56□□□□□ -0.08
SMARCC2-208ENST00000550150 CD109Q6YHK3 1445 aa14.55□□□□□ -0.08
SMARCC2-208ENST00000550150 MAP3K4Q9Y6R4 1608 aa14.55□□□□□ -0.08
SMARCC2-208ENST00000550150 ADGRL1O94910 1474 aa14.54□□□□□ -0.08
SMARCC2-208ENST00000550150 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
SMARCC2-208ENST00000550150 ANKRD30BQ9BXX2 1392 aa14.54□□□□□ -0.08
SMARCC2-208ENST00000550150 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
SMARCC2-208ENST00000550150 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
SMARCC2-208ENST00000550150 DIP2BQ9P265 1576 aa14.54□□□□□ -0.08
SMARCC2-208ENST00000550150 NBPF8Q3BBV2 869 aa14.53□□□□□ -0.08
SMARCC2-208ENST00000550150 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
SMARCC2-208ENST00000550150 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
SMARCC2-208ENST00000550150 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
SMARCC2-208ENST00000550150 PPRC1Q5VV67 1664 aaKnown RBP14.53□□□□□ -0.08
SMARCC2-208ENST00000550150 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
SMARCC2-208ENST00000550150 INO80Q9ULG1 1556 aaPredicted RBP14.52□□□□□ -0.08
SMARCC2-208ENST00000550150 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.09
SMARCC2-208ENST00000550150 MAGI2Q86UL8 1455 aa14.51□□□□□ -0.09
SMARCC2-208ENST00000550150 CCDC7Q96M83 1385 aa14.51□□□□□ -0.09
SMARCC2-208ENST00000550150 RTN4Q9NQC3 1192 aaKnown RBP14.51□□□□□ -0.09
SMARCC2-208ENST00000550150 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
SMARCC2-208ENST00000550150 KIDINS220Q9ULH0 1771 aa14.51□□□□□ -0.09
SMARCC2-208ENST00000550150 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
SMARCC2-208ENST00000550150 KIF7Q2M1P5 1343 aa14.5□□□□□ -0.09
SMARCC2-208ENST00000550150 TMC1Q8TDI8 760 aa14.49□□□□□ -0.09
SMARCC2-208ENST00000550150 IQGAP3Q86VI3 1631 aa14.48□□□□□ -0.09
SMARCC2-208ENST00000550150 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
SMARCC2-208ENST00000550150 ATP7AQ04656 1500 aa14.48□□□□□ -0.09
SMARCC2-208ENST00000550150 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
SMARCC2-208ENST00000550150 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
SMARCC2-208ENST00000550150 NUP155O75694 1391 aa14.46□□□□□ -0.09
SMARCC2-208ENST00000550150 FAM69CQ0P6D2 419 aa14.46□□□□□ -0.09
SMARCC2-208ENST00000550150 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
SMARCC2-208ENST00000550150 SPATA31E1Q6ZUB1 1445 aa14.46□□□□□ -0.1
SMARCC2-208ENST00000550150 SPAG9O60271 1321 aaKnown RBP14.46□□□□□ -0.1
SMARCC2-208ENST00000550150 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 GLI2P10070 1586 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 DEPDC5O75140 1603 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 FRMPD1Q5SYB0 1578 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 KDM5CP41229 1560 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 POGZQ7Z3K3 1410 aa14.45□□□□□ -0.1
SMARCC2-208ENST00000550150 RICTORQ6R327 1708 aa14.44□□□□□ -0.1
SMARCC2-208ENST00000550150 DUOX2Q9NRD8 1548 aa14.44□□□□□ -0.1
SMARCC2-208ENST00000550150 PKD2Q13563 968 aa14.43□□□□□ -0.1
SMARCC2-208ENST00000550150 NUDCQ9Y266 331 aa14.43□□□□□ -0.1
SMARCC2-208ENST00000550150 ABCA6Q8N139 1617 aa14.43□□□□□ -0.1
SMARCC2-208ENST00000550150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.13e-7■■■■□ 23.4
SMARCC2-208ENST00000550150 MROH1Q8NDA8 1641 aa14.42□□□□□ -0.1
SMARCC2-208ENST00000550150 IPO9Q96P70 1041 aaKnown RBP14.42□□□□□ -0.1
SMARCC2-208ENST00000550150 MYT1LQ9UL68 1186 aa14.42□□□□□ -0.1
SMARCC2-208ENST00000550150 LAMC1P11047 1609 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 ZNF518AQ6AHZ1 1483 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 E9PCH4 1651 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 CFAP74Q9C0B2 1584 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
SMARCC2-208ENST00000550150 ERBINQ96RT1 1412 aa14.4□□□□□ -0.1
SMARCC2-208ENST00000550150 PLA2R1Q13018 1463 aa14.39□□□□□ -0.11
SMARCC2-208ENST00000550150 COL17A1Q9UMD9 1497 aaPredicted RBP14.39□□□□□ -0.11
SMARCC2-208ENST00000550150 HECW2Q9P2P5 1572 aa14.39□□□□□ -0.11
SMARCC2-208ENST00000550150 SIGLEC1Q9BZZ2 1709 aa14.39□□□□□ -0.11
SMARCC2-208ENST00000550150 NEO1Q92859 1461 aa14.38□□□□□ -0.11
SMARCC2-208ENST00000550150 YEATS2Q9ULM3 1422 aa14.38□□□□□ -0.11
SMARCC2-208ENST00000550150 SKAP1Q86WV1 359 aa14.37□□□□□ -0.11
SMARCC2-208ENST00000550150 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
SMARCC2-208ENST00000550150 EXOC6Q8TAG9 804 aa14.37□□□□□ -0.11
SMARCC2-208ENST00000550150 VWDEQ8N2E2 1590 aa14.36□□□□□ -0.11
SMARCC2-208ENST00000550150 NEFMP07197 916 aa14.36□□□□□ -0.11
SMARCC2-208ENST00000550150 ATP10AO60312 1499 aa14.35□□□□□ -0.11
SMARCC2-208ENST00000550150 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
SMARCC2-208ENST00000550150 IL27Q8NEV9 243 aa14.35□□□□□ -0.11
SMARCC2-208ENST00000550150 RNF17Q9BXT8 1623 aaKnown RBP14.35□□□□□ -0.11
SMARCC2-208ENST00000550150 CARD11Q9BXL7 1154 aa14.34□□□□□ -0.11
SMARCC2-208ENST00000550150 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
SMARCC2-208ENST00000550150 MLH3Q9UHC1 1453 aa14.34□□□□□ -0.11
SMARCC2-208ENST00000550150 PLIN1O60240 522 aa14.33□□□□□ -0.12
SMARCC2-208ENST00000550150 DHX29Q7Z478 1369 aaKnown RBP14.33□□□□□ -0.12
SMARCC2-208ENST00000550150 EIF2AK4Q9P2K8 1649 aaKnown RBP14.33□□□□□ -0.12
SMARCC2-208ENST00000550150 KIF3BO15066 747 aa14.33□□□□□ -0.12
SMARCC2-208ENST00000550150 RALGAPBQ86X10 1494 aa14.33□□□□□ -0.12
SMARCC2-208ENST00000550150 USP47Q96K76 1375 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms