RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
SMARCC2-208ENST00000550150 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
SMARCC2-208ENST00000550150 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
SMARCC2-208ENST00000550150 ABCC9O60706 1549 aa18.82■□□□□ 0.6
SMARCC2-208ENST00000550150 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
SMARCC2-208ENST00000550150 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
SMARCC2-208ENST00000550150 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
SMARCC2-208ENST00000550150 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
SMARCC2-208ENST00000550150 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
SMARCC2-208ENST00000550150 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
SMARCC2-208ENST00000550150 NACADO15069 1562 aa18.31■□□□□ 0.52
SMARCC2-208ENST00000550150 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
SMARCC2-208ENST00000550150 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
SMARCC2-208ENST00000550150 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
SMARCC2-208ENST00000550150 BICRAQ9NZM4 1560 aa17.85■□□□□ 0.45
SMARCC2-208ENST00000550150 HRCP23327 699 aa17.82■□□□□ 0.44
SMARCC2-208ENST00000550150 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCC2-208ENST00000550150 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
SMARCC2-208ENST00000550150 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
SMARCC2-208ENST00000550150 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
SMARCC2-208ENST00000550150 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
SMARCC2-208ENST00000550150 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.42
SMARCC2-208ENST00000550150 WIZO95785 1651 aa17.53■□□□□ 0.4
SMARCC2-208ENST00000550150 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
SMARCC2-208ENST00000550150 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
SMARCC2-208ENST00000550150 BAZ1AQ9NRL2 1556 aaPredicted RBP17.45■□□□□ 0.38
SMARCC2-208ENST00000550150 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
SMARCC2-208ENST00000550150 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
SMARCC2-208ENST00000550150 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
SMARCC2-208ENST00000550150 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
SMARCC2-208ENST00000550150 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
SMARCC2-208ENST00000550150 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
SMARCC2-208ENST00000550150 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
SMARCC2-208ENST00000550150 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
SMARCC2-208ENST00000550150 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
SMARCC2-208ENST00000550150 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
SMARCC2-208ENST00000550150 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
SMARCC2-208ENST00000550150 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
SMARCC2-208ENST00000550150 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
SMARCC2-208ENST00000550150 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
SMARCC2-208ENST00000550150 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
SMARCC2-208ENST00000550150 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
SMARCC2-208ENST00000550150 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
SMARCC2-208ENST00000550150 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
SMARCC2-208ENST00000550150 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
SMARCC2-208ENST00000550150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
SMARCC2-208ENST00000550150 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
SMARCC2-208ENST00000550150 CCER1Q8TC90 406 aaPredicted RBP16.65■□□□□ 0.26
SMARCC2-208ENST00000550150 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
SMARCC2-208ENST00000550150 CFTRP13569 1480 aa16.62■□□□□ 0.25
SMARCC2-208ENST00000550150 NESP48681 1621 aa16.6■□□□□ 0.25
SMARCC2-208ENST00000550150 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
SMARCC2-208ENST00000550150 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
SMARCC2-208ENST00000550150 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
SMARCC2-208ENST00000550150 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
SMARCC2-208ENST00000550150 NEUROD1Q13562 356 aa16.49■□□□□ 0.23
SMARCC2-208ENST00000550150 SOGA1O94964 1423 aa16.49■□□□□ 0.23
SMARCC2-208ENST00000550150 CUX1P39880 1505 aa16.47■□□□□ 0.23
SMARCC2-208ENST00000550150 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
SMARCC2-208ENST00000550150 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
SMARCC2-208ENST00000550150 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
SMARCC2-208ENST00000550150 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
SMARCC2-208ENST00000550150 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
SMARCC2-208ENST00000550150 DIEXFQ68CQ4 756 aaKnown RBP16.41■□□□□ 0.22
SMARCC2-208ENST00000550150 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
SMARCC2-208ENST00000550150 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
SMARCC2-208ENST00000550150 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-208ENST00000550150 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
SMARCC2-208ENST00000550150 KIF21BO75037 1637 aa16.34■□□□□ 0.21
SMARCC2-208ENST00000550150 EEA1Q15075 1411 aa16.33■□□□□ 0.21
SMARCC2-208ENST00000550150 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
SMARCC2-208ENST00000550150 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
SMARCC2-208ENST00000550150 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
SMARCC2-208ENST00000550150 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
SMARCC2-208ENST00000550150 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
SMARCC2-208ENST00000550150 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.19
SMARCC2-208ENST00000550150 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
SMARCC2-208ENST00000550150 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
SMARCC2-208ENST00000550150 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
SMARCC2-208ENST00000550150 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
SMARCC2-208ENST00000550150 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
SMARCC2-208ENST00000550150 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
SMARCC2-208ENST00000550150 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
SMARCC2-208ENST00000550150 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
SMARCC2-208ENST00000550150 CUX2O14529 1486 aa16.11■□□□□ 0.17
SMARCC2-208ENST00000550150 GOLGA3Q08378 1498 aa16.11■□□□□ 0.17
SMARCC2-208ENST00000550150 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
SMARCC2-208ENST00000550150 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
SMARCC2-208ENST00000550150 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-208ENST00000550150 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-208ENST00000550150 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
SMARCC2-208ENST00000550150 KIF27Q86VH2 1401 aa16.05■□□□□ 0.16
SMARCC2-208ENST00000550150 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
SMARCC2-208ENST00000550150 PRXQ9BXM0 1461 aa16.04■□□□□ 0.16
SMARCC2-208ENST00000550150 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
SMARCC2-208ENST00000550150 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
SMARCC2-208ENST00000550150 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
SMARCC2-208ENST00000550150 IGF1RP08069 1367 aa16.02■□□□□ 0.16
SMARCC2-208ENST00000550150 MIER1Q8N108 512 aa16.02■□□□□ 0.16
SMARCC2-208ENST00000550150 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms