RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 POTEMA6NI47 508 aa11.85□□□□□ -0.51
UBE2N-204ENST00000549833 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
UBE2N-204ENST00000549833 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
UBE2N-204ENST00000549833 KCNH8Q96L42 1107 aa11.83□□□□□ -0.52
UBE2N-204ENST00000549833 MAP3K7O43318 606 aa11.82□□□□□ -0.52
UBE2N-204ENST00000549833 OSBPP22059 807 aa11.82□□□□□ -0.52
UBE2N-204ENST00000549833 ZNF687Q8N1G0 1237 aa11.82□□□□□ -0.52
UBE2N-204ENST00000549833 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
UBE2N-204ENST00000549833 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
UBE2N-204ENST00000549833 ADAM33Q9BZ11 813 aa11.81□□□□□ -0.52
UBE2N-204ENST00000549833 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
UBE2N-204ENST00000549833 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
UBE2N-204ENST00000549833 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
UBE2N-204ENST00000549833 PTPREP23469 700 aa11.79□□□□□ -0.52
UBE2N-204ENST00000549833 PBX2P40425 430 aa11.79□□□□□ -0.52
UBE2N-204ENST00000549833 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.53
UBE2N-204ENST00000549833 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
UBE2N-204ENST00000549833 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
UBE2N-204ENST00000549833 C6orf132Q5T0Z8 1188 aa11.75□□□□□ -0.53
UBE2N-204ENST00000549833 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
UBE2N-204ENST00000549833 ARHGAP33O14559 1287 aa11.74□□□□□ -0.53
UBE2N-204ENST00000549833 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
UBE2N-204ENST00000549833 LMOD2Q6P5Q4 547 aa11.74□□□□□ -0.53
UBE2N-204ENST00000549833 NUTM2FA1L443 756 aa11.73□□□□□ -0.53
UBE2N-204ENST00000549833 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
UBE2N-204ENST00000549833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBE2N-204ENST00000549833 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
UBE2N-204ENST00000549833 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
UBE2N-204ENST00000549833 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
UBE2N-204ENST00000549833 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.53
UBE2N-204ENST00000549833 CERKQ8TCT0 537 aa11.71□□□□□ -0.53
UBE2N-204ENST00000549833 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
UBE2N-204ENST00000549833 WIZO95785 1651 aa11.71□□□□□ -0.54
UBE2N-204ENST00000549833 PSEN2P49810 448 aa11.7□□□□□ -0.54
UBE2N-204ENST00000549833 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
UBE2N-204ENST00000549833 PEG3Q9GZU2 1588 aa11.68□□□□□ -0.54
UBE2N-204ENST00000549833 ATAD2BQ9ULI0 1458 aa11.68□□□□□ -0.54
UBE2N-204ENST00000549833 FCHSD2O94868 740 aa11.67□□□□□ -0.54
UBE2N-204ENST00000549833 COL9A1P20849 921 aa11.66□□□□□ -0.54
UBE2N-204ENST00000549833 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBE2N-204ENST00000549833 PTGDRQ13258 359 aa11.65□□□□□ -0.54
UBE2N-204ENST00000549833 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
UBE2N-204ENST00000549833 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
UBE2N-204ENST00000549833 RSF1Q96T23 1441 aaPredicted RBP11.65□□□□□ -0.54
UBE2N-204ENST00000549833 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
UBE2N-204ENST00000549833 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
UBE2N-204ENST00000549833 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
UBE2N-204ENST00000549833 RBM27Q9P2N5 1060 aaKnown RBP11.63□□□□□ -0.55
UBE2N-204ENST00000549833 HIC1Q14526 733 aa11.62□□□□□ -0.55
UBE2N-204ENST00000549833 SLC4A5Q9BY07 1137 aa11.62□□□□□ -0.55
UBE2N-204ENST00000549833 NPDC1Q9NQX5 325 aaPredicted RBP11.62□□□□□ -0.55
UBE2N-204ENST00000549833 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
UBE2N-204ENST00000549833 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
UBE2N-204ENST00000549833 TK2O00142 265 aa11.61□□□□□ -0.55
UBE2N-204ENST00000549833 GPR37O15354 613 aa11.61□□□□□ -0.55
UBE2N-204ENST00000549833 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
UBE2N-204ENST00000549833 PRSS12P56730 875 aa11.6□□□□□ -0.55
UBE2N-204ENST00000549833 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
UBE2N-204ENST00000549833 CDCA7LQ96GN5 454 aa11.6□□□□□ -0.55
UBE2N-204ENST00000549833 TRIM6-TRIM34B2RNG4 842 aa11.59□□□□□ -0.55
UBE2N-204ENST00000549833 GNPATO15228 680 aa11.58□□□□□ -0.56
UBE2N-204ENST00000549833 ONECUT3O60422 494 aaPredicted RBP11.58□□□□□ -0.56
UBE2N-204ENST00000549833 PROX2Q3B8N5 592 aa11.58□□□□□ -0.56
UBE2N-204ENST00000549833 ADGRD1Q6QNK2 874 aa11.58□□□□□ -0.56
UBE2N-204ENST00000549833 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
UBE2N-204ENST00000549833 VPS9D1Q9Y2B5 631 aa11.57□□□□□ -0.56
UBE2N-204ENST00000549833 ZC3H15Q8WU90 426 aaKnown RBP11.56□□□□□ -0.56
UBE2N-204ENST00000549833 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
UBE2N-204ENST00000549833 TSKSQ9UJT2 592 aa11.55□□□□□ -0.56
UBE2N-204ENST00000549833 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
UBE2N-204ENST00000549833 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
UBE2N-204ENST00000549833 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
UBE2N-204ENST00000549833 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
UBE2N-204ENST00000549833 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
UBE2N-204ENST00000549833 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
UBE2N-204ENST00000549833 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
UBE2N-204ENST00000549833 FAM198AQ9UFP1 575 aa11.5□□□□□ -0.57
UBE2N-204ENST00000549833 HRO43593 1189 aa11.49□□□□□ -0.57
UBE2N-204ENST00000549833 ZMYND10O75800 440 aa11.49□□□□□ -0.57
UBE2N-204ENST00000549833 FECHP22830 423 aa11.49□□□□□ -0.57
UBE2N-204ENST00000549833 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
UBE2N-204ENST00000549833 SUPT5HO00267 1087 aaKnown RBP11.48□□□□□ -0.57
UBE2N-204ENST00000549833 BARGINQ6ZT62 677 aa11.48□□□□□ -0.57
UBE2N-204ENST00000549833 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
UBE2N-204ENST00000549833 MRPL50Q8N5N7 158 aaKnown RBP11.47□□□□□ -0.57
UBE2N-204ENST00000549833 TATDN2Q93075 761 aa11.47□□□□□ -0.57
UBE2N-204ENST00000549833 MINK1Q8N4C8 1332 aaPredicted RBP11.46□□□□□ -0.57
UBE2N-204ENST00000549833 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
UBE2N-204ENST00000549833 PRKCSHP14314 528 aaPredicted RBP11.46□□□□□ -0.57
UBE2N-204ENST00000549833 LAPTM4BQ86VI4 370 aa11.46□□□□□ -0.57
UBE2N-204ENST00000549833 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
UBE2N-204ENST00000549833 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.57
UBE2N-204ENST00000549833 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
UBE2N-204ENST00000549833 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
UBE2N-204ENST00000549833 ADGRG1Q9Y653 693 aa11.45□□□□□ -0.58
UBE2N-204ENST00000549833 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
UBE2N-204ENST00000549833 OATP04181 439 aa11.43□□□□□ -0.58
UBE2N-204ENST00000549833 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
UBE2N-204ENST00000549833 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
UBE2N-204ENST00000549833 SMAPO00193 183 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms