RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 LCE2DQ5TA82 110 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-208ENST00000549537 HECW1Q76N89 1606 aa10.92□□□□□ -0.66
TMEM116-208ENST00000549537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM116-208ENST00000549537 NEO1Q92859 1461 aa10.92□□□□□ -0.66
TMEM116-208ENST00000549537 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
TMEM116-208ENST00000549537 TTC37Q6PGP7 1564 aa10.91□□□□□ -0.66
TMEM116-208ENST00000549537 DCAF8Q5TAQ9 597 aa10.91□□□□□ -0.66
TMEM116-208ENST00000549537 LRRIQ1Q96JM4 1722 aa10.91□□□□□ -0.66
TMEM116-208ENST00000549537 PLEKHD1A6NEE1 506 aa10.9□□□□□ -0.66
TMEM116-208ENST00000549537 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.67
TMEM116-208ENST00000549537 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
TMEM116-208ENST00000549537 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
TMEM116-208ENST00000549537 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
TMEM116-208ENST00000549537 CASKIN1Q8WXD9 1431 aa10.86□□□□□ -0.67
TMEM116-208ENST00000549537 KIF14Q15058 1648 aa10.86□□□□□ -0.67
TMEM116-208ENST00000549537 RICTORQ6R327 1708 aa10.86□□□□□ -0.67
TMEM116-208ENST00000549537 FANCAO15360 1455 aa10.86□□□□□ -0.67
TMEM116-208ENST00000549537 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
TMEM116-208ENST00000549537 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
TMEM116-208ENST00000549537 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-208ENST00000549537 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
TMEM116-208ENST00000549537 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
TMEM116-208ENST00000549537 IRX5P78411 483 aaPredicted RBP10.84□□□□□ -0.67
TMEM116-208ENST00000549537 PLCH2O75038 1416 aa10.84□□□□□ -0.67
TMEM116-208ENST00000549537 CLIP1P30622 1438 aa10.84□□□□□ -0.67
TMEM116-208ENST00000549537 FYCO1Q9BQS8 1478 aa10.83□□□□□ -0.68
TMEM116-208ENST00000549537 PYGBP11216 843 aa10.83□□□□□ -0.68
TMEM116-208ENST00000549537 DENND4BO75064 1496 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-208ENST00000549537 CCDC18Q5T9S5 1454 aa10.82□□□□□ -0.68
TMEM116-208ENST00000549537 MYO5CQ9NQX4 1742 aa10.82□□□□□ -0.68
TMEM116-208ENST00000549537 ATP1B4Q9UN42 357 aaPredicted RBP10.82□□□□□ -0.68
TMEM116-208ENST00000549537 ZMYM4Q5VZL5 1548 aa10.82□□□□□ -0.68
TMEM116-208ENST00000549537 ARHGEF40Q8TER5 1519 aa10.82□□□□□ -0.68
TMEM116-208ENST00000549537 GSE1Q14687 1217 aa10.81□□□□□ -0.68
TMEM116-208ENST00000549537 CDK11AQ9UQ88 783 aaPredicted RBP10.81□□□□□ -0.68
TMEM116-208ENST00000549537 SNPHO15079 494 aa10.8□□□□□ -0.68
TMEM116-208ENST00000549537 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
TMEM116-208ENST00000549537 POGZQ7Z3K3 1410 aa10.79□□□□□ -0.68
TMEM116-208ENST00000549537 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
TMEM116-208ENST00000549537 ZNF467Q7Z7K2 595 aaPredicted RBP10.78□□□□□ -0.68
TMEM116-208ENST00000549537 KLHL34Q8N239 644 aa10.78□□□□□ -0.68
TMEM116-208ENST00000549537 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
TMEM116-208ENST00000549537 CDC42BPBQ9Y5S2 1711 aa10.78□□□□□ -0.68
TMEM116-208ENST00000549537 SCAPERQ9BY12 1400 aa10.77□□□□□ -0.68
TMEM116-208ENST00000549537 FBXO41Q8TF61 875 aa10.77□□□□□ -0.69
TMEM116-208ENST00000549537 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.69
TMEM116-208ENST00000549537 SIGLEC1Q9BZZ2 1709 aa10.77□□□□□ -0.69
TMEM116-208ENST00000549537 PREX2Q70Z35 1606 aa10.76□□□□□ -0.69
TMEM116-208ENST00000549537 CEP162Q5TB80 1403 aa10.76□□□□□ -0.69
TMEM116-208ENST00000549537 MAGI2Q86UL8 1455 aa10.76□□□□□ -0.69
TMEM116-208ENST00000549537 ST18O60284 1047 aa10.76□□□□□ -0.69
TMEM116-208ENST00000549537 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
TMEM116-208ENST00000549537 YEATS2Q9ULM3 1422 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 ZFYVE16Q7Z3T8 1539 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 EFCAB2Q5VUJ9 269 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 CDC42BPAQ5VT25 1732 aa10.75□□□□□ -0.69
TMEM116-208ENST00000549537 KDM5CP41229 1560 aa10.74□□□□□ -0.69
TMEM116-208ENST00000549537 ABCC1P33527 1531 aa10.74□□□□□ -0.69
TMEM116-208ENST00000549537 ZNF518AQ6AHZ1 1483 aa10.73□□□□□ -0.69
TMEM116-208ENST00000549537 ARHGEF12Q9NZN5 1544 aa10.73□□□□□ -0.69
TMEM116-208ENST00000549537 MADDQ8WXG6 1647 aa10.73□□□□□ -0.69
TMEM116-208ENST00000549537 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-208ENST00000549537 VASPP50552 380 aaPredicted RBP10.72□□□□□ -0.69
TMEM116-208ENST00000549537 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
TMEM116-208ENST00000549537 PTPRMP28827 1452 aa10.72□□□□□ -0.69
TMEM116-208ENST00000549537 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
TMEM116-208ENST00000549537 ITSN2Q9NZM3 1697 aa10.71□□□□□ -0.69
TMEM116-208ENST00000549537 GPATCH8Q9UKJ3 1502 aaKnown RBP10.7□□□□□ -0.7
TMEM116-208ENST00000549537 SAMD9LQ8IVG5 1584 aa10.69□□□□□ -0.7
TMEM116-208ENST00000549537 ATP10AO60312 1499 aa10.69□□□□□ -0.7
TMEM116-208ENST00000549537 TRAPPC8Q9Y2L5 1435 aa10.69□□□□□ -0.7
TMEM116-208ENST00000549537 AFAP1Q8N556 730 aa10.69□□□□□ -0.7
TMEM116-208ENST00000549537 DIP2CQ9Y2E4 1556 aa10.69□□□□□ -0.7
TMEM116-208ENST00000549537 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 MLH3Q9UHC1 1453 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 C9orf84Q5VXU9 1444 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 ABCA6Q8N139 1617 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 REREQ9P2R6 1566 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 EHBP1L1Q8N3D4 1523 aa10.68□□□□□ -0.7
TMEM116-208ENST00000549537 RIMS1Q86UR5 1692 aaKnown RBP10.67□□□□□ -0.7
TMEM116-208ENST00000549537 ARID4BQ4LE39 1312 aaPredicted RBP10.67□□□□□ -0.7
TMEM116-208ENST00000549537 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
TMEM116-208ENST00000549537 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
TMEM116-208ENST00000549537 TIAM1Q13009 1591 aa10.66□□□□□ -0.7
TMEM116-208ENST00000549537 SYCP2Q9BX26 1530 aa10.66□□□□□ -0.7
TMEM116-208ENST00000549537 KIDINS220Q9ULH0 1771 aa10.66□□□□□ -0.7
TMEM116-208ENST00000549537 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
TMEM116-208ENST00000549537 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.7
TMEM116-208ENST00000549537 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.71
TMEM116-208ENST00000549537 CCNB3Q8WWL7 1395 aa10.64□□□□□ -0.71
TMEM116-208ENST00000549537 AGLP35573 1532 aa10.63□□□□□ -0.71
TMEM116-208ENST00000549537 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
TMEM116-208ENST00000549537 INO80Q9ULG1 1556 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-208ENST00000549537 PSEN1P49768 467 aa10.62□□□□□ -0.71
TMEM116-208ENST00000549537 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
TMEM116-208ENST00000549537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms